RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.1■□□□□ 0.33
TRAF4-216ENST00000586813 SLC35G5Q96KT7 338 aa17.1■□□□□ 0.33
TRAF4-216ENST00000586813 HS6ST2Q96MM7 605 aa17.1■□□□□ 0.33
TRAF4-216ENST00000586813 GRIP2Q9C0E4 1043 aa17.1■□□□□ 0.33
TRAF4-216ENST00000586813 FAIMQ9NVQ4 179 aa17.1■□□□□ 0.33
TRAF4-216ENST00000586813 LGALS13Q9UHV8 139 aa17.1■□□□□ 0.33
TRAF4-216ENST00000586813 GDF2Q9UK05 429 aaPredicted RBP17.1■□□□□ 0.33
TRAF4-216ENST00000586813 MKLN1Q9UL63 735 aa17.1■□□□□ 0.33
TRAF4-216ENST00000586813 OR5H1A6NKK0 313 aa17.09■□□□□ 0.33
TRAF4-216ENST00000586813 SULT2B1O00204 365 aa17.09■□□□□ 0.33
TRAF4-216ENST00000586813 ABCD4O14678 606 aa17.09■□□□□ 0.33
TRAF4-216ENST00000586813 PGM3O95394 542 aa17.09■□□□□ 0.33
TRAF4-216ENST00000586813 NUDT17P0C025 328 aa17.09■□□□□ 0.33
TRAF4-216ENST00000586813 PGCP20142 388 aa17.09■□□□□ 0.33
TRAF4-216ENST00000586813 CLDN8P56748 225 aa17.09■□□□□ 0.33
TRAF4-216ENST00000586813 CSNK2A1P68400 391 aaPredicted RBP17.09■□□□□ 0.33
TRAF4-216ENST00000586813 MAD2L1Q13257 205 aaPredicted RBP17.09■□□□□ 0.33
TRAF4-216ENST00000586813 OR4F3Q6IEY1 312 aa17.09■□□□□ 0.33
TRAF4-216ENST00000586813 C16orf62Q7Z3J2 963 aa17.09■□□□□ 0.33
TRAF4-216ENST00000586813 BARX1Q9HBU1 254 aaPredicted RBP17.09■□□□□ 0.33
TRAF4-216ENST00000586813 ACER3Q9NUN7 267 aa17.09■□□□□ 0.33
TRAF4-216ENST00000586813 ASIC5Q9NY37 505 aa17.09■□□□□ 0.33
TRAF4-216ENST00000586813 NOP53Q9NZM5 478 aaKnown RBP17.09■□□□□ 0.33
TRAF4-216ENST00000586813 EMC3Q9P0I2 261 aa17.09■□□□□ 0.33
TRAF4-216ENST00000586813 MXRA5Q9NR99 2828 aa17.08■□□□□ 0.33
TRAF4-216ENST00000586813 PLCE1Q9P212 2302 aa17.08■□□□□ 0.33
TRAF4-216ENST00000586813 IGKV3D-15A0A087WSY6 115 aa17.08■□□□□ 0.32
TRAF4-216ENST00000586813 GOLGA8QA0A0J9YX86 632 aa17.08■□□□□ 0.32
TRAF4-216ENST00000586813 GOLGA8OA6NCC3 632 aa17.08■□□□□ 0.32
TRAF4-216ENST00000586813 GOLGA8NF8WBI6 632 aa17.08■□□□□ 0.32
TRAF4-216ENST00000586813 RNASET2O00584 256 aaKnown RBP17.08■□□□□ 0.32
TRAF4-216ENST00000586813 TLX2O43763 284 aaPredicted RBP17.08■□□□□ 0.32
TRAF4-216ENST00000586813 CD5LO43866 347 aa17.08■□□□□ 0.32
TRAF4-216ENST00000586813 KIAA0513O60268 411 aa17.08■□□□□ 0.32
TRAF4-216ENST00000586813 EMX2Q04743 252 aa17.08■□□□□ 0.32
TRAF4-216ENST00000586813 EIF3MQ7L2H7 374 aaKnown RBP17.08■□□□□ 0.32
TRAF4-216ENST00000586813 ZNF433Q8N7K0 673 aaPredicted RBP17.08■□□□□ 0.32
TRAF4-216ENST00000586813 FAM71CQ8NEG0 241 aa17.08■□□□□ 0.32
TRAF4-216ENST00000586813 MIPOL1Q8TD10 442 aa17.08■□□□□ 0.32
TRAF4-216ENST00000586813 OR51I1Q9H343 314 aa17.08■□□□□ 0.32
TRAF4-216ENST00000586813 EXD2Q9NVH0 621 aa17.08■□□□□ 0.32
TRAF4-216ENST00000586813 BCAS1O75363 584 aaPredicted RBP17.07■□□□□ 0.32
TRAF4-216ENST00000586813 RAD51DO75771 328 aa17.07■□□□□ 0.32
TRAF4-216ENST00000586813 IGHV3-9P01782 118 aa17.07■□□□□ 0.32
TRAF4-216ENST00000586813 BPGMP07738 259 aa17.07■□□□□ 0.32
TRAF4-216ENST00000586813 PGM1P36871 562 aa17.07■□□□□ 0.32
TRAF4-216ENST00000586813 CASP9P55211 416 aa17.07■□□□□ 0.32
TRAF4-216ENST00000586813 PDK3Q15120 406 aa17.07■□□□□ 0.32
TRAF4-216ENST00000586813 MAPK14Q16539 360 aa17.07■□□□□ 0.32
TRAF4-216ENST00000586813 NRF1Q16656 503 aa17.07■□□□□ 0.32
TRAF4-216ENST00000586813 FBXW9Q5XUX1 488 aa17.07■□□□□ 0.32
TRAF4-216ENST00000586813 MTDHQ86UE4 582 aaKnown RBP17.07■□□□□ 0.32
TRAF4-216ENST00000586813 OR4A15Q8NGL6 344 aa17.07■□□□□ 0.32
TRAF4-216ENST00000586813 RADILQ96JH8 1075 aa17.07■□□□□ 0.32
TRAF4-216ENST00000586813 CCDC106Q9BWC9 280 aa17.07■□□□□ 0.32
TRAF4-216ENST00000586813 SLC35A3Q9Y2D2 325 aa17.07■□□□□ 0.32
TRAF4-216ENST00000586813 SPIN1Q9Y657 262 aaPredicted RBP17.07■□□□□ 0.32
TRAF4-216ENST00000586813 ZNF716A6NP11 495 aa17.06■□□□□ 0.32
TRAF4-216ENST00000586813 TFPIP10646 304 aa17.06■□□□□ 0.32
TRAF4-216ENST00000586813 CREB1P16220 341 aa17.06■□□□□ 0.32
TRAF4-216ENST00000586813 PTNP21246 168 aa17.06■□□□□ 0.32
TRAF4-216ENST00000586813 APOBEC1P41238 236 aaKnown RBP17.06■□□□□ 0.32
TRAF4-216ENST00000586813 PDCD2Q16342 344 aaPredicted RBP17.06■□□□□ 0.32
TRAF4-216ENST00000586813 SMU1Q2TAY7 513 aa17.06■□□□□ 0.32
TRAF4-216ENST00000586813 ATAD3BQ5T9A4 648 aa17.06■□□□□ 0.32
TRAF4-216ENST00000586813 AGAP6Q5VW22 663 aa17.06■□□□□ 0.32
TRAF4-216ENST00000586813 TYW3Q6IPR3 259 aaKnown RBP17.06■□□□□ 0.32
TRAF4-216ENST00000586813 TMEM108Q6UXF1 575 aa17.06■□□□□ 0.32
TRAF4-216ENST00000586813 UBE2J2Q8N2K1 259 aa17.06■□□□□ 0.32
TRAF4-216ENST00000586813 PIAS4Q8N2W9 510 aaPredicted RBP17.06■□□□□ 0.32
TRAF4-216ENST00000586813 OR8J2Q8NGG1 315 aa17.06■□□□□ 0.32
TRAF4-216ENST00000586813 ZNF563Q8TA94 476 aa17.06■□□□□ 0.32
TRAF4-216ENST00000586813 OIT3Q8WWZ8 545 aa17.06■□□□□ 0.32
TRAF4-216ENST00000586813 APH1AQ96BI3 265 aa17.06■□□□□ 0.32
TRAF4-216ENST00000586813 ZHX1-C8orf76Q96EF9 292 aa17.06■□□□□ 0.32
TRAF4-216ENST00000586813 ZIM3Q96PE6 472 aa17.06■□□□□ 0.32
TRAF4-216ENST00000586813 REPIN1Q9BWE0 567 aaKnown RBP17.06■□□□□ 0.32
TRAF4-216ENST00000586813 CTPS2Q9NRF8 586 aa17.06■□□□□ 0.32
TRAF4-216ENST00000586813 POLE3Q9NRF9 147 aa17.06■□□□□ 0.32
TRAF4-216ENST00000586813 CHRNA9Q9UGM1 479 aa17.06■□□□□ 0.32
TRAF4-216ENST00000586813 B3GALT5Q9Y2C3 310 aa17.06■□□□□ 0.32
TRAF4-216ENST00000586813 NOSIPQ9Y314 301 aaKnown RBP17.06■□□□□ 0.32
TRAF4-216ENST00000586813 WDR45Q9Y484 360 aa17.06■□□□□ 0.32
TRAF4-216ENST00000586813 SSX4O60224 188 aa17.05■□□□□ 0.32
TRAF4-216ENST00000586813 PMS2P2O95744 297 aa17.05■□□□□ 0.32
TRAF4-216ENST00000586813 AGR2O95994 175 aa17.05■□□□□ 0.32
TRAF4-216ENST00000586813 GUSBP08236 651 aa17.05■□□□□ 0.32
TRAF4-216ENST00000586813 OR12D1P0DN82 309 aa17.05■□□□□ 0.32
TRAF4-216ENST00000586813 ETV4P43268 484 aa17.05■□□□□ 0.32
TRAF4-216ENST00000586813 SPOCK1Q08629 439 aa17.05■□□□□ 0.32
TRAF4-216ENST00000586813 IFFO1Q0D2I5 559 aa17.05■□□□□ 0.32
TRAF4-216ENST00000586813 FUT5Q11128 374 aa17.05■□□□□ 0.32
TRAF4-216ENST00000586813 TNFAIP8L2Q6P589 184 aaPredicted RBP17.05■□□□□ 0.32
TRAF4-216ENST00000586813 GRINAQ7Z429 371 aa17.05■□□□□ 0.32
TRAF4-216ENST00000586813 ANKRD46Q86W74 232 aa17.05■□□□□ 0.32
TRAF4-216ENST00000586813 OR52N5Q8NH56 324 aa17.05■□□□□ 0.32
TRAF4-216ENST00000586813 PIGXQ8TBF5 258 aa17.05■□□□□ 0.32
TRAF4-216ENST00000586813 RAB8BQ92930 207 aa17.05■□□□□ 0.32
TRAF4-216ENST00000586813 ARL5BQ96KC2 179 aa17.05■□□□□ 0.32
TRAF4-216ENST00000586813 PPP1R36Q96LQ0 422 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms