RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 ACER3Q9NUN7 267 aa12.74□□□□□ -0.37
SDF2-202ENST00000585428 ATAD3AQ9NVI7 634 aa12.74□□□□□ -0.37
SDF2-202ENST00000585428 CDC42EP3Q9UKI2 254 aa12.74□□□□□ -0.37
SDF2-202ENST00000585428 FREM1Q5H8C1 2179 aa12.74□□□□□ -0.37
SDF2-202ENST00000585428 CR1P17927 2039 aa12.74□□□□□ -0.37
SDF2-202ENST00000585428 DUXAA6NLW8 204 aa12.73□□□□□ -0.37
SDF2-202ENST00000585428 SULT2B1O00204 365 aa12.73□□□□□ -0.37
SDF2-202ENST00000585428 PHF1O43189 567 aaPredicted RBP12.73□□□□□ -0.37
SDF2-202ENST00000585428 NPHS1O60500 1241 aa12.73□□□□□ -0.37
SDF2-202ENST00000585428 STX11O75558 287 aa12.73□□□□□ -0.37
SDF2-202ENST00000585428 UGT2B17O75795 530 aa12.73□□□□□ -0.37
SDF2-202ENST00000585428 PRPS1L1P21108 318 aa12.73□□□□□ -0.37
SDF2-202ENST00000585428 CD40P25942 277 aa12.73□□□□□ -0.37
SDF2-202ENST00000585428 ALDH3A1P30838 453 aa12.73□□□□□ -0.37
SDF2-202ENST00000585428 NUDT6P53370 316 aa12.73□□□□□ -0.37
SDF2-202ENST00000585428 CSNK2A1P68400 391 aaPredicted RBP12.73□□□□□ -0.37
SDF2-202ENST00000585428 HBA1P69905 142 aa12.73□□□□□ -0.37
SDF2-202ENST00000585428 RAB35Q15286 201 aa12.73□□□□□ -0.37
SDF2-202ENST00000585428 ARHGAP11BQ3KRB8 267 aa12.73□□□□□ -0.37
SDF2-202ENST00000585428 SPDYE7PQ495Y7 208 aa12.73□□□□□ -0.37
SDF2-202ENST00000585428 SYT14P1Q58G82 188 aa12.73□□□□□ -0.37
SDF2-202ENST00000585428 IL23RQ5VWK5 629 aa12.73□□□□□ -0.37
SDF2-202ENST00000585428 ABLIM2Q6H8Q1 611 aa12.73□□□□□ -0.37
SDF2-202ENST00000585428 C6orf120Q7Z4R8 191 aa12.73□□□□□ -0.37
SDF2-202ENST00000585428 MUC15Q8N387 334 aa12.73□□□□□ -0.37
SDF2-202ENST00000585428 KRTCAP2Q8N6L1 136 aa12.73□□□□□ -0.37
SDF2-202ENST00000585428 ZNF614Q8N883 585 aa12.73□□□□□ -0.37
SDF2-202ENST00000585428 OR5D16Q8NGK9 328 aa12.73□□□□□ -0.37
SDF2-202ENST00000585428 PRPF18Q99633 342 aaKnown RBP12.73□□□□□ -0.37
SDF2-202ENST00000585428 CCDC106Q9BWC9 280 aa12.73□□□□□ -0.37
SDF2-202ENST00000585428 BHLHE41Q9C0J9 482 aaPredicted RBP12.73□□□□□ -0.37
SDF2-202ENST00000585428 SERHL2Q9H4I8 314 aa12.73□□□□□ -0.37
SDF2-202ENST00000585428 MID2Q9UJV3 735 aa12.73□□□□□ -0.37
SDF2-202ENST00000585428 CENPVL1A0A0U1RR11 272 aa12.72□□□□□ -0.37
SDF2-202ENST00000585428 H7C417 338 aa12.72□□□□□ -0.37
SDF2-202ENST00000585428 SLU7O95391 586 aaKnown RBP12.72□□□□□ -0.37
SDF2-202ENST00000585428 F12P00748 615 aaPredicted RBP12.72□□□□□ -0.37
SDF2-202ENST00000585428 GUSBP08236 651 aa12.72□□□□□ -0.37
SDF2-202ENST00000585428 MATN1P21941 496 aa12.72□□□□□ -0.37
SDF2-202ENST00000585428 THBS2P35442 1172 aa12.72□□□□□ -0.37
SDF2-202ENST00000585428 APOBEC1P41238 236 aaKnown RBP12.72□□□□□ -0.37
SDF2-202ENST00000585428 MERTKQ12866 999 aa12.72□□□□□ -0.37
SDF2-202ENST00000585428 GPR68Q15743 365 aa12.72□□□□□ -0.37
SDF2-202ENST00000585428 GABRA6Q16445 453 aa12.72□□□□□ -0.37
SDF2-202ENST00000585428 MAPK14Q16539 360 aa12.72□□□□□ -0.37
SDF2-202ENST00000585428 BHLHB9Q6PI77 547 aa12.72□□□□□ -0.37
SDF2-202ENST00000585428 SLC22A25Q6T423 547 aa12.72□□□□□ -0.37
SDF2-202ENST00000585428 CLEC2AQ6UVW9 174 aa12.72□□□□□ -0.37
SDF2-202ENST00000585428 C4orf33Q8N1A6 199 aa12.72□□□□□ -0.37
SDF2-202ENST00000585428 TMCO5AQ8N6Q1 288 aa12.72□□□□□ -0.37
SDF2-202ENST00000585428 EIF1ADQ8N9N8 165 aaKnown RBP12.72□□□□□ -0.37
SDF2-202ENST00000585428 WDR31Q8NA23 367 aa12.72□□□□□ -0.37
SDF2-202ENST00000585428 OR52N5Q8NH56 324 aa12.72□□□□□ -0.37
SDF2-202ENST00000585428 OR5AK3PQ8NH89 298 aa12.72□□□□□ -0.37
SDF2-202ENST00000585428 TMEM234Q8WY98 164 aa12.72□□□□□ -0.37
SDF2-202ENST00000585428 HTRA1Q92743 480 aa12.72□□□□□ -0.37
SDF2-202ENST00000585428 KCNK17Q96T54 332 aa12.72□□□□□ -0.37
SDF2-202ENST00000585428 EML4Q9HC35 981 aaKnown RBP12.72□□□□□ -0.37
SDF2-202ENST00000585428 EMC3Q9P0I2 261 aa12.72□□□□□ -0.37
SDF2-202ENST00000585428 MKLN1Q9UL63 735 aa12.72□□□□□ -0.37
SDF2-202ENST00000585428 NOSIPQ9Y314 301 aaKnown RBP12.72□□□□□ -0.37
SDF2-202ENST00000585428 CADP27708 2225 aa12.72□□□□□ -0.37
SDF2-202ENST00000585428 CIB4A0PJX0 185 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 PDLIM1O00151 329 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 CFLARO15519 480 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 RAD51DO75771 328 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 CYP7B1O75881 506 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 PMS2P2O95744 297 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 AK1P00568 194 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 CSTAP01040 98 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 IGHV3-9P01782 118 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 DHRS4L1P0CG22 281 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 SLC25A16P16260 332 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 PGCP20142 388 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 FKBP2P26885 142 aaKnown RBP12.71□□□□□ -0.37
SDF2-202ENST00000585428 ARRB2P32121 409 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 PGM1P36871 562 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 CLK1P49759 484 aaKnown RBP12.71□□□□□ -0.37
SDF2-202ENST00000585428 FABP6P51161 128 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 ZNF83P51522 516 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 CCR4P51679 360 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 SLC16A1P53985 500 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 FOXG1P55316 489 aaPredicted RBP12.71□□□□□ -0.37
SDF2-202ENST00000585428 RPS26P62854 115 aaKnown RBP12.71□□□□□ -0.37
SDF2-202ENST00000585428 H3F3AP84243 136 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 SPOCK1Q08629 439 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 ATP6AP1LQ52LC2 224 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 CYB5R2Q6BCY4 276 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 OR7E24Q6IFN5 339 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 ZNF544Q6NX49 715 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 KLHL17Q6TDP4 642 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 B3GLCTQ6Y288 498 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 EIF3MQ7L2H7 374 aaKnown RBP12.71□□□□□ -0.37
SDF2-202ENST00000585428 ADGRG3Q86Y34 549 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 CCDC103Q8IW40 242 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 FBXL14Q8N1E6 418 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 UBE2J2Q8N2K1 259 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 ZNF525Q8N782 197 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 FAM71CQ8NEG0 241 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 MIPOL1Q8TD10 442 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms