RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 QRSL1Q9H0R6 528 aaKnown RBP11.73□□□□□ -0.53
ERBB2-220ENST00000584684 TPT1P8Q9HAU6 139 aa11.73□□□□□ -0.53
ERBB2-220ENST00000584684 BCO1Q9HAY6 547 aa11.73□□□□□ -0.53
ERBB2-220ENST00000584684 SERINC1Q9NRX5 453 aa11.73□□□□□ -0.53
ERBB2-220ENST00000584684 KLHL9Q9P2J3 617 aa11.73□□□□□ -0.53
ERBB2-220ENST00000584684 CHRNA9Q9UGM1 479 aa11.73□□□□□ -0.53
ERBB2-220ENST00000584684 CLEC4AQ9UMR7 237 aa11.73□□□□□ -0.53
ERBB2-220ENST00000584684 GMEB1Q9Y692 573 aa11.73□□□□□ -0.53
ERBB2-220ENST00000584684 UQCRHLA0A096LP55 91 aa11.72□□□□□ -0.53
ERBB2-220ENST00000584684 CLDN24A6NM45 220 aa11.72□□□□□ -0.53
ERBB2-220ENST00000584684 DEFB108AA8MXU0 73 aa11.72□□□□□ -0.53
ERBB2-220ENST00000584684 SMAD9O15198 467 aaKnown RBP11.72□□□□□ -0.53
ERBB2-220ENST00000584684 SIAH2O43255 324 aa11.72□□□□□ -0.53
ERBB2-220ENST00000584684 DNPH1O43598 174 aa11.72□□□□□ -0.53
ERBB2-220ENST00000584684 ADAM11O75078 769 aa11.72□□□□□ -0.53
ERBB2-220ENST00000584684 PRKD3O94806 890 aa11.72□□□□□ -0.53
ERBB2-220ENST00000584684 ATE1O95260 518 aa11.72□□□□□ -0.53
ERBB2-220ENST00000584684 ANP32DO95626 131 aa11.72□□□□□ -0.53
ERBB2-220ENST00000584684 RAF1P04049 648 aa11.72□□□□□ -0.53
ERBB2-220ENST00000584684 NR2F1P10589 423 aa11.72□□□□□ -0.53
ERBB2-220ENST00000584684 BMP2P12643 396 aa11.72□□□□□ -0.53
ERBB2-220ENST00000584684 PSMB1P20618 241 aaKnown RBP11.72□□□□□ -0.53
ERBB2-220ENST00000584684 DNASE1P24855 282 aa11.72□□□□□ -0.53
ERBB2-220ENST00000584684 HTR3AP46098 478 aa11.72□□□□□ -0.53
ERBB2-220ENST00000584684 CLK1P49759 484 aaKnown RBP11.72□□□□□ -0.53
ERBB2-220ENST00000584684 ATP4BP51164 291 aa11.72□□□□□ -0.53
ERBB2-220ENST00000584684 MAP2K6P52564 334 aa11.72□□□□□ -0.53
ERBB2-220ENST00000584684 CRISP3P54108 245 aa11.72□□□□□ -0.53
ERBB2-220ENST00000584684 PPP2R2AP63151 447 aa11.72□□□□□ -0.53
ERBB2-220ENST00000584684 CSNK2A1P68400 391 aaPredicted RBP11.72□□□□□ -0.53
ERBB2-220ENST00000584684 ZSWIM7Q19AV6 140 aa11.72□□□□□ -0.53
ERBB2-220ENST00000584684 TMEM201Q5SNT2 666 aa11.72□□□□□ -0.53
ERBB2-220ENST00000584684 RNF220Q5VTB9 566 aa11.72□□□□□ -0.53
ERBB2-220ENST00000584684 PRAMEF8Q5VWM4 474 aa11.72□□□□□ -0.53
ERBB2-220ENST00000584684 PRAMEF7Q5VXH5 474 aa11.72□□□□□ -0.53
ERBB2-220ENST00000584684 ABLIM2Q6H8Q1 611 aa11.72□□□□□ -0.53
ERBB2-220ENST00000584684 TFAP2EQ6VUC0 442 aa11.72□□□□□ -0.53
ERBB2-220ENST00000584684 STAC2Q6ZMT1 411 aa11.72□□□□□ -0.53
ERBB2-220ENST00000584684 PEX5LQ8IYB4 626 aa11.72□□□□□ -0.53
ERBB2-220ENST00000584684 ZNF440Q8IYI8 595 aa11.72□□□□□ -0.53
ERBB2-220ENST00000584684 WDR60Q8WVS4 1066 aa11.72□□□□□ -0.53
ERBB2-220ENST00000584684 DYDC1Q8WWB3 177 aa11.72□□□□□ -0.53
ERBB2-220ENST00000584684 CNOT9Q92600 299 aaKnown RBP11.72□□□□□ -0.53
ERBB2-220ENST00000584684 OR5B2Q96R09 309 aa11.72□□□□□ -0.53
ERBB2-220ENST00000584684 PSD2Q9BQI7 771 aa11.72□□□□□ -0.53
ERBB2-220ENST00000584684 PAIP1Q9H074 479 aaKnown RBP11.72□□□□□ -0.53
ERBB2-220ENST00000584684 LIME1Q9H400 295 aa11.72□□□□□ -0.53
ERBB2-220ENST00000584684 INTS9Q9NV88 658 aaKnown RBP11.72□□□□□ -0.53
ERBB2-220ENST00000584684 KLHL28Q9NXS3 571 aa11.72□□□□□ -0.53
ERBB2-220ENST00000584684 ING1Q9UK53 422 aaPredicted RBP11.72□□□□□ -0.53
ERBB2-220ENST00000584684 MED13LQ71F56 2210 aa11.72□□□□□ -0.53
ERBB2-220ENST00000584684 SETD2Q9BYW2 2564 aaPredicted RBP11.72□□□□□ -0.53
ERBB2-220ENST00000584684 RAI1Q7Z5J4 1906 aaPredicted RBP11.71□□□□□ -0.53
ERBB2-220ENST00000584684 A0A096LPI6 279 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 A0A1W2PNR3 127 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 A0A1W2PPR1 153 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 CDHR4A6H8M9 788 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 ZNF724A8MTY0 619 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 CYTIPO60759 359 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 PMS2P2O95744 297 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 YES1P07947 543 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 THBS1P07996 1170 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 TFPTP0C1Z6 253 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 ETFAP13804 333 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 UQCRBP14927 111 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 ENPP1P22413 925 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 CRATP43155 626 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 DIO1P49895 249 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 AQP5P55064 265 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 DSTNP60981 165 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 FADDQ13158 208 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 PDK3Q15120 406 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 GTDC1Q4AE62 458 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 LIN52Q52LA3 116 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 C6orf10Q5SRN2 563 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 LRIF1Q5T3J3 769 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 MRPL2Q5T653 305 aaKnown RBP11.71□□□□□ -0.53
ERBB2-220ENST00000584684 BLOC1S3Q6QNY0 202 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 TMPPEQ6ZT21 453 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 GABRG1Q8N1C3 465 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 ATP6V1C2Q8NEY4 427 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 ZNF563Q8TA94 476 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 SLC38A5Q8WUX1 472 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 CKAP2Q8WWK9 683 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 AURKBQ96GD4 344 aaPredicted RBP11.71□□□□□ -0.53
ERBB2-220ENST00000584684 EBF4Q9BQW3 602 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 RAD21L1Q9H4I0 556 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 A4GALTQ9NPC4 353 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 CTPS2Q9NRF8 586 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 CCM2LQ9NUG4 571 aaPredicted RBP11.71□□□□□ -0.53
ERBB2-220ENST00000584684 PLEKHA6Q9Y2H5 1048 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 GPR52Q9Y2T5 361 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 HDGFL3Q9Y3E1 203 aa11.71□□□□□ -0.53
ERBB2-220ENST00000584684 FREM1Q5H8C1 2179 aa11.71□□□□□ -0.54
ERBB2-220ENST00000584684 NF1P21359 2839 aa11.7□□□□□ -0.54
ERBB2-220ENST00000584684 IGKV3D-15A0A087WSY6 115 aa11.7□□□□□ -0.54
ERBB2-220ENST00000584684 CFAP73A6NFT4 308 aa11.7□□□□□ -0.54
ERBB2-220ENST00000584684 AP3D1O14617 1153 aa11.7□□□□□ -0.54
ERBB2-220ENST00000584684 ZNF208O43345 1280 aa11.7□□□□□ -0.54
ERBB2-220ENST00000584684 GCM2O75603 506 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms