RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 TRIM49D1C9J1S8 452 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 CLOCKO15516 846 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 TOX4O94842 621 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 ESRRBO95718 433 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 DDCP20711 480 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 GCKP35557 465 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 NCBP2P52298 156 aaKnown RBP eCLIP6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 TRA2BP62995 288 aaKnown RBP6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 MRPS22P82650 360 aaKnown RBP6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 SLC18A2Q05940 514 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 FOXF1Q12946 379 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 CALCOCO2Q13137 446 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 DUSP5Q16690 384 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 PPP4R4Q6NUP7 873 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 CBLN3Q6UW01 205 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 OLIG3Q7RTU3 272 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 DTX2Q86UW9 622 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 TUSC5Q8IXB3 177 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 GTPBP8Q8N3Z3 284 aaPredicted RBP6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 OR2T11Q8NH01 316 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 OR2V1Q8NHB1 315 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 FAM110BQ8TC76 370 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 SMAP2Q8WU79 429 aaPredicted RBP6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 ZNF75CPQ92670 426 aaPredicted RBP6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 ERP27Q96DN0 273 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 ZBED6CLQ96FA7 236 aaPredicted RBP6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 C16orf58Q96GQ5 468 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 SH3YL1Q96HL8 342 aaPredicted RBP6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 ZNF300Q96RE9 604 aaPredicted RBP6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 ZNF382Q96SR6 550 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 PAFAH2Q99487 392 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 C12orf65Q9H3J6 166 aaKnown RBP6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 CXorf56Q9H5V9 222 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 CXorf36Q9H7Y0 433 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 TCF7L1Q9HCS4 588 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 PFDN4Q9NQP4 134 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 MED17Q9NVC6 651 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 ZIM2Q9NZV7 527 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 ABCG2Q9UNQ0 655 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 B3GALT5Q9Y2C3 310 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 OR10H1Q9Y4A9 318 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 RNF115Q9Y4L5 304 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 POLR3HQ9Y535 204 aaPredicted RBP6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 AP4B1Q9Y6B7 739 aa6.94□□□□□ -1.3
PPP4R1-225ENST00000583438 A0A087WV62 115 aa6.93□□□□□ -1.3
PPP4R1-225ENST00000583438 ZSCAN12O43309 604 aa6.93□□□□□ -1.3
PPP4R1-225ENST00000583438 BCAS1O75363 584 aaPredicted RBP6.93□□□□□ -1.3
PPP4R1-225ENST00000583438 NKX2-2O95096 273 aa6.93□□□□□ -1.3
PPP4R1-225ENST00000583438 H6PDO95479 791 aa6.93□□□□□ -1.3
PPP4R1-225ENST00000583438 OTCP00480 354 aa6.93□□□□□ -1.3
PPP4R1-225ENST00000583438 GABRA3P34903 492 aa6.93□□□□□ -1.3
PPP4R1-225ENST00000583438 SFTPDP35247 375 aa6.93□□□□□ -1.3
PPP4R1-225ENST00000583438 EEF1A1P68104 462 aaKnown RBP6.93□□□□□ -1.3
PPP4R1-225ENST00000583438 SLC25A3Q00325 362 aa6.93□□□□□ -1.3
PPP4R1-225ENST00000583438 ZNF117Q03924 483 aa6.93□□□□□ -1.3
PPP4R1-225ENST00000583438 C2orf80Q0P641 193 aa6.93□□□□□ -1.3
PPP4R1-225ENST00000583438 ILF2Q12905 390 aaKnown RBP6.93□□□□□ -1.3
PPP4R1-225ENST00000583438 KIAA0040Q15053 153 aa6.93□□□□□ -1.3
PPP4R1-225ENST00000583438 P2RY6Q15077 328 aa6.93□□□□□ -1.3
PPP4R1-225ENST00000583438 ERCC6LQ2NKX8 1250 aa6.93□□□□□ -1.3
PPP4R1-225ENST00000583438 TMEM249Q2WGJ8 235 aa6.93□□□□□ -1.3
PPP4R1-225ENST00000583438 EEF1A1P5Q5VTE0 462 aa6.93□□□□□ -1.3
PPP4R1-225ENST00000583438 GPRIN3Q6ZVF9 776 aa6.93□□□□□ -1.3
PPP4R1-225ENST00000583438 ZNF525Q8N782 197 aa6.93□□□□□ -1.3
PPP4R1-225ENST00000583438 GBP7Q8N8V2 638 aaPredicted RBP6.93□□□□□ -1.3
PPP4R1-225ENST00000583438 SLC16A11Q8NCK7 471 aa6.93□□□□□ -1.3
PPP4R1-225ENST00000583438 OR10H5Q8NGA6 315 aa6.93□□□□□ -1.3
PPP4R1-225ENST00000583438 CDC26Q8NHZ8 85 aa6.93□□□□□ -1.3
PPP4R1-225ENST00000583438 SNX33Q8WV41 574 aa6.93□□□□□ -1.3
PPP4R1-225ENST00000583438 NEIL1Q96FI4 390 aaPredicted RBP6.93□□□□□ -1.3
PPP4R1-225ENST00000583438 GPHA2Q96T91 129 aa6.93□□□□□ -1.3
PPP4R1-225ENST00000583438 FAIM2Q9BWQ8 316 aa6.93□□□□□ -1.3
PPP4R1-225ENST00000583438 MRPL46Q9H2W6 279 aaKnown RBP6.93□□□□□ -1.3
PPP4R1-225ENST00000583438 ANKZF1Q9H8Y5 726 aa6.93□□□□□ -1.3
PPP4R1-225ENST00000583438 SIRT3Q9NTG7 399 aaPredicted RBP6.93□□□□□ -1.3
PPP4R1-225ENST00000583438 AHSPQ9NZD4 102 aa6.93□□□□□ -1.3
PPP4R1-225ENST00000583438 KCNE3Q9Y6H6 103 aa6.93□□□□□ -1.3
PPP4R1-225ENST00000583438 CMYA5Q8N3K9 4069 aa6.92□□□□□ -1.3
PPP4R1-225ENST00000583438 PKD1L1Q8TDX9 2849 aa6.92□□□□□ -1.3
PPP4R1-225ENST00000583438 GNG14A0A1W2PPG7 69 aa6.92□□□□□ -1.3
PPP4R1-225ENST00000583438 A0A1W2PR80 420 aa6.92□□□□□ -1.3
PPP4R1-225ENST00000583438 A8MV72 311 aaPredicted RBP6.92□□□□□ -1.3
PPP4R1-225ENST00000583438 C9JVG2 144 aa6.92□□□□□ -1.3
PPP4R1-225ENST00000583438 E7EQL1 145 aa6.92□□□□□ -1.3
PPP4R1-225ENST00000583438 SSX4O60224 188 aa6.92□□□□□ -1.3
PPP4R1-225ENST00000583438 SMIM24O75264 130 aa6.92□□□□□ -1.3
PPP4R1-225ENST00000583438 LYZL6O75951 148 aa6.92□□□□□ -1.3
PPP4R1-225ENST00000583438 KCNK2O95069 426 aa6.92□□□□□ -1.3
PPP4R1-225ENST00000583438 ADAP00813 363 aa6.92□□□□□ -1.3
PPP4R1-225ENST00000583438 C1QCP02747 245 aa6.92□□□□□ -1.3
PPP4R1-225ENST00000583438 RBP1P09455 135 aa6.92□□□□□ -1.3
PPP4R1-225ENST00000583438 ANXA4P09525 319 aaPredicted RBP6.92□□□□□ -1.3
PPP4R1-225ENST00000583438 IGHV4-31P0DP07 118 aa6.92□□□□□ -1.3
PPP4R1-225ENST00000583438 PPP3CBP16298 524 aa6.92□□□□□ -1.3
PPP4R1-225ENST00000583438 ZNF17P17021 662 aa6.92□□□□□ -1.3
PPP4R1-225ENST00000583438 IGHV1-2P23083 117 aa6.92□□□□□ -1.3
PPP4R1-225ENST00000583438 IGFBP5P24593 272 aa6.92□□□□□ -1.3
PPP4R1-225ENST00000583438 ACSM2AQ08AH3 577 aa6.92□□□□□ -1.3
PPP4R1-225ENST00000583438 ZNF763Q0D2J5 394 aa6.92□□□□□ -1.3
PPP4R1-225ENST00000583438 HSPB3Q12988 150 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms