RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 DCAF13Q9NV06 445 aaKnown RBP18.07■□□□□ 0.48
TOP3A-213ENST00000582230 RPS6KB2Q9UBS0 482 aa18.07■□□□□ 0.48
TOP3A-213ENST00000582230 CHRNA9Q9UGM1 479 aa18.07■□□□□ 0.48
TOP3A-213ENST00000582230 SH3BGRL2Q9UJC5 107 aa18.07■□□□□ 0.48
TOP3A-213ENST00000582230 OSGIN1Q9UJX0 560 aa18.07■□□□□ 0.48
TOP3A-213ENST00000582230 SPENQ96T58 3664 aaKnown RBP18.07■□□□□ 0.48
TOP3A-213ENST00000582230 M0R3H8 397 aa18.06■□□□□ 0.48
TOP3A-213ENST00000582230 ARPC2O15144 300 aa18.06■□□□□ 0.48
TOP3A-213ENST00000582230 ADAMDEC1O15204 470 aa18.06■□□□□ 0.48
TOP3A-213ENST00000582230 DNAJC8O75937 253 aaPredicted RBP18.06■□□□□ 0.48
TOP3A-213ENST00000582230 IL11P20809 199 aa18.06■□□□□ 0.48
TOP3A-213ENST00000582230 MSX2P35548 267 aaPredicted RBP18.06■□□□□ 0.48
TOP3A-213ENST00000582230 CLK1P49759 484 aaKnown RBP18.06■□□□□ 0.48
TOP3A-213ENST00000582230 SUCLG1P53597 346 aaKnown RBP18.06■□□□□ 0.48
TOP3A-213ENST00000582230 CLDN20P56880 219 aa18.06■□□□□ 0.48
TOP3A-213ENST00000582230 RPS3AP61247 264 aaKnown RBP18.06■□□□□ 0.48
TOP3A-213ENST00000582230 PDSS1Q5T2R2 415 aa18.06■□□□□ 0.48
TOP3A-213ENST00000582230 POMZP3Q6PJE2 187 aa18.06■□□□□ 0.48
TOP3A-213ENST00000582230 CCDC121Q6ZUS5 278 aa18.06■□□□□ 0.48
TOP3A-213ENST00000582230 ESPNLQ6ZVH7 1005 aa18.06■□□□□ 0.48
TOP3A-213ENST00000582230 CHMP1BQ7LBR1 199 aa18.06■□□□□ 0.48
TOP3A-213ENST00000582230 GGNQ86UU5 652 aa18.06■□□□□ 0.48
TOP3A-213ENST00000582230 CARM1Q86X55 608 aa18.06■□□□□ 0.48
TOP3A-213ENST00000582230 ADGRG3Q86Y34 549 aa18.06■□□□□ 0.48
TOP3A-213ENST00000582230 OR6T1Q8NGN1 323 aa18.06■□□□□ 0.48
TOP3A-213ENST00000582230 VANGL1Q8TAA9 524 aaPredicted RBP18.06■□□□□ 0.48
TOP3A-213ENST00000582230 DNAJA4Q8WW22 397 aaPredicted RBP18.06■□□□□ 0.48
TOP3A-213ENST00000582230 KLHL15Q96M94 604 aa18.06■□□□□ 0.48
TOP3A-213ENST00000582230 NSMCE2Q96MF7 247 aa18.06■□□□□ 0.48
TOP3A-213ENST00000582230 MCHR1Q99705 422 aa18.06■□□□□ 0.48
TOP3A-213ENST00000582230 WFDC6Q9BQY6 131 aa18.06■□□□□ 0.48
TOP3A-213ENST00000582230 TMEM185BQ9H7F4 350 aa18.06■□□□□ 0.48
TOP3A-213ENST00000582230 C12orf10Q9HB07 376 aa18.06■□□□□ 0.48
TOP3A-213ENST00000582230 PAQR5Q9NXK6 330 aaPredicted RBP18.06■□□□□ 0.48
TOP3A-213ENST00000582230 ACTR3BQ9P1U1 418 aa18.06■□□□□ 0.48
TOP3A-213ENST00000582230 SAMD4AQ9UPU9 718 aaKnown RBP18.06■□□□□ 0.48
TOP3A-213ENST00000582230 TMED7-TICAM2A0A0A6YYA0 188 aa18.05■□□□□ 0.48
TOP3A-213ENST00000582230 CCL21O00585 134 aa18.05■□□□□ 0.48
TOP3A-213ENST00000582230 LRRTM2O43300 516 aa18.05■□□□□ 0.48
TOP3A-213ENST00000582230 SEC14L5O43304 696 aa18.05■□□□□ 0.48
TOP3A-213ENST00000582230 CXCR1P25024 350 aa18.05■□□□□ 0.48
TOP3A-213ENST00000582230 HTR2AP28223 471 aa18.05■□□□□ 0.48
TOP3A-213ENST00000582230 TRIM25Q14258 630 aaKnown RBP18.05■□□□□ 0.48
TOP3A-213ENST00000582230 OR1Q1Q15612 314 aa18.05■□□□□ 0.48
TOP3A-213ENST00000582230 TMEM176BQ3YBM2 270 aaPredicted RBP18.05■□□□□ 0.48
TOP3A-213ENST00000582230 C1orf185Q5T7R7 199 aa18.05■□□□□ 0.48
TOP3A-213ENST00000582230 TMEM211Q6ICI0 200 aa18.05■□□□□ 0.48
TOP3A-213ENST00000582230 MTFR2Q6P444 385 aa18.05■□□□□ 0.48
TOP3A-213ENST00000582230 ULK3Q6PHR2 472 aa18.05■□□□□ 0.48
TOP3A-213ENST00000582230 FKBP9P1Q75LS8 142 aa18.05■□□□□ 0.48
TOP3A-213ENST00000582230 LACC1Q8IV20 430 aa18.05■□□□□ 0.48
TOP3A-213ENST00000582230 C3orf49Q96BT1 292 aa18.05■□□□□ 0.48
TOP3A-213ENST00000582230 PCDHAC1Q9H158 963 aa18.05■□□□□ 0.48
TOP3A-213ENST00000582230 CALHM2Q9HA72 323 aa18.05■□□□□ 0.48
TOP3A-213ENST00000582230 SELENONQ9NZV5 590 aa18.05■□□□□ 0.48
TOP3A-213ENST00000582230 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.05■□□□□ 0.48
TOP3A-213ENST00000582230 SLC5A6Q9Y289 635 aa18.05■□□□□ 0.48
TOP3A-213ENST00000582230 MEMO1Q9Y316 297 aa18.05■□□□□ 0.48
TOP3A-213ENST00000582230 TMED7Q9Y3B3 224 aa18.05■□□□□ 0.48
TOP3A-213ENST00000582230 CD8B2A6NJW9 211 aa18.04■□□□□ 0.48
TOP3A-213ENST00000582230 EIF1AYO14602 144 aaKnown RBP18.04■□□□□ 0.48
TOP3A-213ENST00000582230 ZNF208O43345 1280 aa18.04■□□□□ 0.48
TOP3A-213ENST00000582230 TPST2O60704 377 aa18.04■□□□□ 0.48
TOP3A-213ENST00000582230 PDE5AO76074 875 aa18.04■□□□□ 0.48
TOP3A-213ENST00000582230 PNMTP11086 282 aa18.04■□□□□ 0.48
TOP3A-213ENST00000582230 SFTPDP35247 375 aa18.04■□□□□ 0.48
TOP3A-213ENST00000582230 CLDN15P56746 228 aa18.04■□□□□ 0.48
TOP3A-213ENST00000582230 KCNC4Q03721 635 aa18.04■□□□□ 0.48
TOP3A-213ENST00000582230 NPTX1Q15818 432 aa18.04■□□□□ 0.48
TOP3A-213ENST00000582230 CTU2Q2VPK5 515 aaKnown RBP18.04■□□□□ 0.48
TOP3A-213ENST00000582230 ACSF3Q4G176 576 aaPredicted RBP18.04■□□□□ 0.48
TOP3A-213ENST00000582230 IFI44LQ53G44 452 aa18.04■□□□□ 0.48
TOP3A-213ENST00000582230 ZNF613Q6PF04 617 aa18.04■□□□□ 0.48
TOP3A-213ENST00000582230 B3GNT6Q6ZMB0 384 aa18.04■□□□□ 0.48
TOP3A-213ENST00000582230 C3P1Q6ZMU1 363 aa18.04■□□□□ 0.48
TOP3A-213ENST00000582230 ATP6V1C2Q8NEY4 427 aa18.04■□□□□ 0.48
TOP3A-213ENST00000582230 OR4D11Q8NGI4 311 aa18.04■□□□□ 0.48
TOP3A-213ENST00000582230 OR2V1Q8NHB1 315 aa18.04■□□□□ 0.48
TOP3A-213ENST00000582230 PHF10Q8WUB8 498 aaKnown RBP18.04■□□□□ 0.48
TOP3A-213ENST00000582230 GEMIN6Q8WXD5 167 aaKnown RBP18.04■□□□□ 0.48
TOP3A-213ENST00000582230 UCN2Q96RP3 112 aa18.04■□□□□ 0.48
TOP3A-213ENST00000582230 TUBA1CQ9BQE3 449 aa18.04■□□□□ 0.48
TOP3A-213ENST00000582230 PRR14Q9BWN1 585 aa18.04■□□□□ 0.48
TOP3A-213ENST00000582230 POLR2J2Q9GZM3 115 aaKnown RBP18.04■□□□□ 0.48
TOP3A-213ENST00000582230 POLR2J3Q9H1A7 115 aaKnown RBP18.04■□□□□ 0.48
TOP3A-213ENST00000582230 TIGARQ9NQ88 270 aa18.04■□□□□ 0.48
TOP3A-213ENST00000582230 PRRC2CQ9Y520 2896 aaKnown RBP18.03■□□□□ 0.48
TOP3A-213ENST00000582230 A0A0J9YW62 118 aa18.03■□□□□ 0.48
TOP3A-213ENST00000582230 A0A1B0GWA3 101 aa18.03■□□□□ 0.48
TOP3A-213ENST00000582230 H0YC42 278 aa18.03■□□□□ 0.48
TOP3A-213ENST00000582230 GSC2O15499 205 aa18.03■□□□□ 0.48
TOP3A-213ENST00000582230 STAMBPO95630 424 aa18.03■□□□□ 0.48
TOP3A-213ENST00000582230 OPN1LWP04000 364 aa18.03■□□□□ 0.48
TOP3A-213ENST00000582230 TNFRSF1BP20333 461 aa18.03■□□□□ 0.48
TOP3A-213ENST00000582230 SLC7A1P30825 629 aa18.03■□□□□ 0.48
TOP3A-213ENST00000582230 OR1E2P47887 323 aa18.03■□□□□ 0.48
TOP3A-213ENST00000582230 TPD52P55327 224 aaPredicted RBP18.03■□□□□ 0.48
TOP3A-213ENST00000582230 SGCBQ16585 318 aa18.03■□□□□ 0.48
TOP3A-213ENST00000582230 SYT14P1Q58G82 188 aa18.03■□□□□ 0.48
TOP3A-213ENST00000582230 MTX3Q5HYI7 312 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms