RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 ZNF605Q86T29 641 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 CYP4Z1Q86W10 505 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 LACC1Q8IV20 430 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 OFCC1Q8IZS5 231 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 GHDCQ8N2G8 530 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 ZNF563Q8TA94 476 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 ADAMTS16Q8TE57 1224 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 SLC38A4Q969I6 547 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 SLC47A1Q96FL8 570 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 DHRS1Q96LJ7 313 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 ZNF300Q96RE9 604 aaPredicted RBP9.41□□□□□ -0.9
CCDC47-203ENST00000580986 MCHR1Q99705 422 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 WFDC6Q9BQY6 131 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 ZNF426Q9BUY5 554 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 AMBRA1Q9C0C7 1298 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 CCM2LQ9NUG4 571 aaPredicted RBP9.41□□□□□ -0.9
CCDC47-203ENST00000580986 ARMC1Q9NVT9 282 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 NTNG1Q9Y2I2 539 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 SPIN1Q9Y657 262 aaPredicted RBP9.41□□□□□ -0.9
CCDC47-203ENST00000580986 AP4B1Q9Y6B7 739 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 COL6A6A6NMZ7 2263 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 PCNX3Q9H6A9 2034 aa9.41□□□□□ -0.9
CCDC47-203ENST00000580986 ATRXP46100 2492 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 A0A087WUJ7 227 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 TRGV5A0A0B4J1U4 118 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 A0A1B0GWA3 101 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 A0A1W2PRQ8 180 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 OR2M5A3KFT3 312 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 GJE1A6NN92 205 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 FAM166BA8MTA8 275 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 FRS3O43559 492 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 FZD7O75084 574 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 FABP3P05413 133 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 EDN3P14138 238 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 SLC7A1P30825 629 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 RYKP34925 604 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 RFC3P40938 356 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 RBM34P42696 430 aaKnown RBP9.4□□□□□ -0.9
CCDC47-203ENST00000580986 OR1E2P47887 323 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 RAC1P63000 192 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 ST3GAL3Q11203 375 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 FOXF1Q12946 379 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 NFATC3Q12968 1075 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 CCNIQ14094 377 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 DGCR6Q14129 220 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 OR1Q1Q15612 314 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 TOMM34Q15785 309 aaPredicted RBP9.4□□□□□ -0.9
CCDC47-203ENST00000580986 ALG10BQ5I7T1 473 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 RAET1LQ5VY80 246 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 VASNQ6EMK4 673 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 ZFP1Q6P2D0 407 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 LINC00114Q6XXX2 140 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 TSEN54Q7Z6J9 526 aaKnown RBP9.4□□□□□ -0.9
CCDC47-203ENST00000580986 ATG4DQ86TL0 474 aaPredicted RBP9.4□□□□□ -0.9
CCDC47-203ENST00000580986 SPATA24Q86W54 205 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 ZDHHC21Q8IVQ6 265 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 OR14L1PQ8NHC6 308 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 VANGL1Q8TAA9 524 aaPredicted RBP9.4□□□□□ -0.9
CCDC47-203ENST00000580986 POC1BQ8TC44 478 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 CANT1Q8WVQ1 401 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 HPS1Q92902 700 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 C3orf49Q96BT1 292 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 USB1Q9BQ65 265 aaKnown RBP9.4□□□□□ -0.9
CCDC47-203ENST00000580986 KLHDC3Q9BQ90 382 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 TMEM43Q9BTV4 400 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 SLC19A3Q9BZV2 496 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 SERINC1Q9NRX5 453 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 RPS6KB2Q9UBS0 482 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 CHRNA9Q9UGM1 479 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 OSGIN1Q9UJX0 560 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 A4GNTQ9UNA3 340 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 VDAC3Q9Y277 283 aa9.4□□□□□ -0.9
CCDC47-203ENST00000580986 FAM32AQ9Y421 112 aaKnown RBP9.4□□□□□ -0.9
CCDC47-203ENST00000580986 ERICH4A6NGS2 130 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 TTLL8A6PVC2 850 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 BCKDKO14874 412 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 ADAMDEC1O15204 470 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 DNPH1O43598 174 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 NPIPB7O75200 414 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 TRAPPC6AO75865 159 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 KRT36O76013 467 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 CELA3AP09093 270 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 PEPDP12955 493 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 CPN1P15169 458 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 TNFRSF1BP20333 461 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 TACR3P29371 465 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 LHX2P50458 406 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 RNF144AP50876 292 aaPredicted RBP9.39□□□□□ -0.91
CCDC47-203ENST00000580986 HMGA2P52926 109 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 SMIM11AP58511 58 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 TAS2R41P59536 307 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 CRYZQ08257 329 aaKnown RBP9.39□□□□□ -0.91
CCDC47-203ENST00000580986 MERTKQ12866 999 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 TOMM20Q15388 145 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 WIPI1Q5MNZ9 446 aaPredicted RBP9.39□□□□□ -0.91
CCDC47-203ENST00000580986 DEF8Q6ZN54 512 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 ESPNLQ6ZVH7 1005 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 ADGRG3Q86Y34 549 aa9.39□□□□□ -0.91
CCDC47-203ENST00000580986 RBM45Q8IUH3 476 aaKnown RBP9.39□□□□□ -0.91
CCDC47-203ENST00000580986 PM20D2Q8IYS1 436 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms