RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 CD8BP10966 210 aa9.75□□□□□ -0.85
NDEL1-208ENST00000580237 CCNA2P20248 432 aa9.75□□□□□ -0.85
NDEL1-208ENST00000580237 RPS4Y1P22090 263 aaKnown RBP9.75□□□□□ -0.85
NDEL1-208ENST00000580237 AGTR1P30556 359 aa9.75□□□□□ -0.85
NDEL1-208ENST00000580237 CD79BP40259 229 aa9.75□□□□□ -0.85
NDEL1-208ENST00000580237 APOBEC1P41238 236 aaKnown RBP9.75□□□□□ -0.85
NDEL1-208ENST00000580237 KIR2DL2P43627 348 aaPredicted RBP9.75□□□□□ -0.85
NDEL1-208ENST00000580237 HTR3AP46098 478 aa9.75□□□□□ -0.85
NDEL1-208ENST00000580237 COPZ1P61923 177 aa9.75□□□□□ -0.85
NDEL1-208ENST00000580237 CSNK2A1P68400 391 aaPredicted RBP9.75□□□□□ -0.85
NDEL1-208ENST00000580237 SF3A3Q12874 501 aaKnown RBP eCLIP9.75□□□□□ -0.852e-6■■□□□ 13.2
NDEL1-208ENST00000580237 LRIF1Q5T3J3 769 aa9.75□□□□□ -0.85
NDEL1-208ENST00000580237 DHDDSQ86SQ9 333 aa9.75□□□□□ -0.85
NDEL1-208ENST00000580237 VRK2Q86Y07 508 aa9.75□□□□□ -0.85
NDEL1-208ENST00000580237 FUNDC1Q8IVP5 155 aa9.75□□□□□ -0.85
NDEL1-208ENST00000580237 CADM2Q8N3J6 435 aa9.75□□□□□ -0.85
NDEL1-208ENST00000580237 BBS10Q8TAM1 723 aa9.75□□□□□ -0.85
NDEL1-208ENST00000580237 LINC01560Q8TB33 94 aa9.75□□□□□ -0.85
NDEL1-208ENST00000580237 RNF128Q8TEB7 428 aa9.75□□□□□ -0.85
NDEL1-208ENST00000580237 MAL2Q969L2 176 aa9.75□□□□□ -0.85
NDEL1-208ENST00000580237 MED18Q9BUE0 208 aa9.75□□□□□ -0.85
NDEL1-208ENST00000580237 CLEC4MQ9H2X3 399 aaPredicted RBP9.75□□□□□ -0.85
NDEL1-208ENST00000580237 A4GALTQ9NPC4 353 aa9.75□□□□□ -0.85
NDEL1-208ENST00000580237 CTPS2Q9NRF8 586 aa9.75□□□□□ -0.85
NDEL1-208ENST00000580237 SLC25A37Q9NYZ2 338 aa9.75□□□□□ -0.85
NDEL1-208ENST00000580237 CHRNA9Q9UGM1 479 aa9.75□□□□□ -0.85
NDEL1-208ENST00000580237 ZNF232Q9UNY5 417 aa9.75□□□□□ -0.85
NDEL1-208ENST00000580237 NDUFAF1Q9Y375 327 aa9.75□□□□□ -0.85
NDEL1-208ENST00000580237 DSPPQ9NZW4 1301 aa9.75□□□□□ -0.85
NDEL1-208ENST00000580237 POLQO75417 2590 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 APCP25054 2843 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 SPG11Q96JI7 2443 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 CCDC168Q8NDH2 2452 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 IGHV3-15A0A0B4J1V0 119 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 A0A0G2JPF8 293 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 A6NNC1 897 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 HNRNPCL2B2RXH8 293 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 HNRNPCL3B7ZW38 293 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 SULT2B1O00204 365 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 ETV2O00321 342 aaPredicted RBP9.74□□□□□ -0.85
NDEL1-208ENST00000580237 EFNA2O43921 213 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 HNRNPCL1O60812 293 aaKnown RBP9.74□□□□□ -0.85
NDEL1-208ENST00000580237 DNAJA2O60884 412 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 FESP07332 822 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 THBS1P07996 1170 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 NUDT7P0C024 238 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 TFPTP0C1Z6 253 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 HNRNPCL4P0DMR1 293 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 EPXP11678 715 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 ENPP1P22413 925 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 DIO1P49895 249 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 POLR2HP52434 150 aaKnown RBP9.74□□□□□ -0.85
NDEL1-208ENST00000580237 KRTAP10-9P60411 292 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 GUCY1A3Q02108 690 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 NFYCQ13952 458 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 CYP51A1Q16850 503 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 ZSWIM7Q19AV6 140 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 ZNF311Q5JNZ3 666 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 PAGE3Q5JUK9 113 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 RNF220Q5VTB9 566 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 PRAMEF8Q5VWM4 474 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 PRAMEF7Q5VXH5 474 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 ZNF550Q7Z398 422 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 KRT73Q86Y46 540 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 SLC43A2Q8N370 569 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 NFKBIDQ8NI38 313 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 DDIT4LQ96D03 193 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 DNAJA3Q96EY1 480 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 TACO1Q9BSH4 297 aaKnown RBP9.74□□□□□ -0.85
NDEL1-208ENST00000580237 CCDC106Q9BWC9 280 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 KLHL4Q9C0H6 718 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 MRGBPQ9NV56 204 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 RLIMQ9NVW2 624 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 ELOVL5Q9NYP7 299 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 VAPAQ9P0L0 249 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 KLHL9Q9P2J3 617 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 KLHL13Q9P2N7 655 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 SLC13A4Q9UKG4 626 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 ITGB1BP2Q9UKP3 347 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 ANGPT4Q9Y264 503 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 IFT52Q9Y366 437 aa9.74□□□□□ -0.85
NDEL1-208ENST00000580237 TMED7-TICAM2A0A0A6YYA0 188 aa9.73□□□□□ -0.85
NDEL1-208ENST00000580237 CDHR4A6H8M9 788 aa9.73□□□□□ -0.85
NDEL1-208ENST00000580237 C16orf97H3BN30 126 aa9.73□□□□□ -0.85
NDEL1-208ENST00000580237 CTAG2O75638 210 aa9.73□□□□□ -0.85
NDEL1-208ENST00000580237 PRKD3O94806 890 aa9.73□□□□□ -0.85
NDEL1-208ENST00000580237 GKN3PP0CG01 181 aa9.73□□□□□ -0.85
NDEL1-208ENST00000580237 ARAFP10398 606 aa9.73□□□□□ -0.85
NDEL1-208ENST00000580237 BMP2P12643 396 aa9.73□□□□□ -0.85
NDEL1-208ENST00000580237 HOXB9P17482 250 aaPredicted RBP9.73□□□□□ -0.85
NDEL1-208ENST00000580237 TACR3P29371 465 aa9.73□□□□□ -0.85
NDEL1-208ENST00000580237 UGT2B10P36537 528 aa9.73□□□□□ -0.85
NDEL1-208ENST00000580237 ARFIP2P53365 341 aa9.73□□□□□ -0.85
NDEL1-208ENST00000580237 RAC3P60763 192 aa9.73□□□□□ -0.85
NDEL1-208ENST00000580237 NCALDP61601 193 aa9.73□□□□□ -0.85
NDEL1-208ENST00000580237 CDK6Q00534 326 aa9.73□□□□□ -0.85
NDEL1-208ENST00000580237 PLAURQ03405 335 aa9.73□□□□□ -0.85
NDEL1-208ENST00000580237 FAM27E3Q08E93 113 aa9.73□□□□□ -0.85
NDEL1-208ENST00000580237 EPS8Q12929 822 aa9.73□□□□□ -0.85
NDEL1-208ENST00000580237 SCARB2Q14108 478 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms