RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 S100PBPQ96BU1 408 aa12.87□□□□□ -0.35
SMARCE1-213ENST00000578044 PLPPR2Q96GM1 343 aa12.87□□□□□ -0.35
SMARCE1-213ENST00000578044 RADILQ96JH8 1075 aa12.87□□□□□ -0.35
SMARCE1-213ENST00000578044 PKNOX2Q96KN3 472 aa12.87□□□□□ -0.35
SMARCE1-213ENST00000578044 THUMPD3Q9BV44 507 aaKnown RBP12.87□□□□□ -0.35
SMARCE1-213ENST00000578044 CCDC106Q9BWC9 280 aa12.87□□□□□ -0.35
SMARCE1-213ENST00000578044 HEATR1Q9H583 2144 aaKnown RBP12.87□□□□□ -0.35
SMARCE1-213ENST00000578044 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.87□□□□□ -0.35
SMARCE1-213ENST00000578044 AIG1Q9NVV5 245 aa12.87□□□□□ -0.35
SMARCE1-213ENST00000578044 THAP1Q9NVV9 213 aa12.87□□□□□ -0.35
SMARCE1-213ENST00000578044 EMC3Q9P0I2 261 aa12.87□□□□□ -0.35
SMARCE1-213ENST00000578044 MKLN1Q9UL63 735 aa12.87□□□□□ -0.35
SMARCE1-213ENST00000578044 ABCA1O95477 2261 aa12.87□□□□□ -0.35
SMARCE1-213ENST00000578044 TRPC5OSA6NMA1 111 aa12.86□□□□□ -0.35
SMARCE1-213ENST00000578044 ZNF814B7Z6K7 855 aa12.86□□□□□ -0.35
SMARCE1-213ENST00000578044 OVOL3O00110 214 aa12.86□□□□□ -0.35
SMARCE1-213ENST00000578044 SMAD9O15198 467 aaKnown RBP12.86□□□□□ -0.35
SMARCE1-213ENST00000578044 HDAC3O15379 428 aa12.86□□□□□ -0.35
SMARCE1-213ENST00000578044 ZNF208O43345 1280 aa12.86□□□□□ -0.35
SMARCE1-213ENST00000578044 SNNO75324 88 aaPredicted RBP12.86□□□□□ -0.35
SMARCE1-213ENST00000578044 OPN1LWP04000 364 aa12.86□□□□□ -0.35
SMARCE1-213ENST00000578044 THBS1P07996 1170 aa12.86□□□□□ -0.35
SMARCE1-213ENST00000578044 IL32P24001 234 aa12.86□□□□□ -0.35
SMARCE1-213ENST00000578044 S100A3P33764 101 aa12.86□□□□□ -0.35
SMARCE1-213ENST00000578044 PTH2RP49190 550 aa12.86□□□□□ -0.35
SMARCE1-213ENST00000578044 DIO1P49895 249 aa12.86□□□□□ -0.35
SMARCE1-213ENST00000578044 RPS26P62854 115 aaKnown RBP12.86□□□□□ -0.35
SMARCE1-213ENST00000578044 KCNJ10P78508 379 aa12.86□□□□□ -0.35
SMARCE1-213ENST00000578044 RASGEF1BQ0VAM2 473 aa12.86□□□□□ -0.35
SMARCE1-213ENST00000578044 MPP2Q14168 576 aa12.86□□□□□ -0.35
SMARCE1-213ENST00000578044 SPANXN4Q5MJ08 99 aa12.86□□□□□ -0.35
SMARCE1-213ENST00000578044 TIMM23BQ5SRD1 257 aa12.86□□□□□ -0.35
SMARCE1-213ENST00000578044 SEZ6L2Q6UXD5 910 aa12.86□□□□□ -0.35
SMARCE1-213ENST00000578044 FRRS1Q6ZNA5 592 aa12.86□□□□□ -0.35
SMARCE1-213ENST00000578044 LRRC74BQ6ZQY2 392 aa12.86□□□□□ -0.35
SMARCE1-213ENST00000578044 MSANTD1Q6ZTZ1 278 aa12.86□□□□□ -0.35
SMARCE1-213ENST00000578044 YTHDF3Q7Z739 585 aaKnown RBP12.86□□□□□ -0.35
SMARCE1-213ENST00000578044 GALNT5Q7Z7M9 940 aa12.86□□□□□ -0.35
SMARCE1-213ENST00000578044 XAGE5Q8WWM1 108 aa12.86□□□□□ -0.35
SMARCE1-213ENST00000578044 GTPBP3Q969Y2 492 aaKnown RBP12.86□□□□□ -0.35
SMARCE1-213ENST00000578044 ZNF524Q96C55 264 aa12.86□□□□□ -0.35
SMARCE1-213ENST00000578044 ZHX1-C8orf76Q96EF9 292 aa12.86□□□□□ -0.35
SMARCE1-213ENST00000578044 ZC3HAV1LQ96H79 300 aaKnown RBP12.86□□□□□ -0.35
SMARCE1-213ENST00000578044 PIF1Q9H611 641 aa12.86□□□□□ -0.35
SMARCE1-213ENST00000578044 MTHFD2LQ9H903 347 aaPredicted RBP12.86□□□□□ -0.35
SMARCE1-213ENST00000578044 MARCOQ9UEW3 520 aaPredicted RBP12.86□□□□□ -0.35
SMARCE1-213ENST00000578044 CHRNA9Q9UGM1 479 aa12.86□□□□□ -0.35
SMARCE1-213ENST00000578044 RNF115Q9Y4L5 304 aa12.86□□□□□ -0.35
SMARCE1-213ENST00000578044 AGAP5A6NIR3 686 aa12.85□□□□□ -0.35
SMARCE1-213ENST00000578044 HMGN4O00479 90 aa12.85□□□□□ -0.35
SMARCE1-213ENST00000578044 EIF1BO60739 113 aaKnown RBP12.85□□□□□ -0.35
SMARCE1-213ENST00000578044 H6PDO95479 791 aa12.85□□□□□ -0.35
SMARCE1-213ENST00000578044 IL6P05231 212 aa12.85□□□□□ -0.35
SMARCE1-213ENST00000578044 PGRP06401 933 aa12.85□□□□□ -0.35
SMARCE1-213ENST00000578044 UBTFL6P0CB48 400 aaPredicted RBP12.85□□□□□ -0.35
SMARCE1-213ENST00000578044 ZCCHC18P0CG32 403 aa12.85□□□□□ -0.35
SMARCE1-213ENST00000578044 OR12D1P0DN82 309 aa12.85□□□□□ -0.35
SMARCE1-213ENST00000578044 RPS4Y1P22090 263 aaKnown RBP12.85□□□□□ -0.35
SMARCE1-213ENST00000578044 H3F3AP84243 136 aa12.85□□□□□ -0.35
SMARCE1-213ENST00000578044 LTBQ06643 244 aa12.85□□□□□ -0.35
SMARCE1-213ENST00000578044 BST1Q10588 318 aa12.85□□□□□ -0.35
SMARCE1-213ENST00000578044 FUT5Q11128 374 aa12.85□□□□□ -0.35
SMARCE1-213ENST00000578044 MERTKQ12866 999 aa12.85□□□□□ -0.35
SMARCE1-213ENST00000578044 GNA13Q14344 377 aa12.85□□□□□ -0.35
SMARCE1-213ENST00000578044 TAB1Q15750 504 aa12.85□□□□□ -0.35
SMARCE1-213ENST00000578044 MAPK14Q16539 360 aa12.85□□□□□ -0.35
SMARCE1-213ENST00000578044 FAM174BQ3ZCQ3 159 aa12.85□□□□□ -0.35
SMARCE1-213ENST00000578044 CEP85LQ5SZL2 805 aa12.85□□□□□ -0.35
SMARCE1-213ENST00000578044 ZNF440Q8IYI8 595 aa12.85□□□□□ -0.35
SMARCE1-213ENST00000578044 TMCO5AQ8N6Q1 288 aa12.85□□□□□ -0.35
SMARCE1-213ENST00000578044 PIGXQ8TBF5 258 aa12.85□□□□□ -0.35
SMARCE1-213ENST00000578044 BOD1Q96IK1 185 aa12.85□□□□□ -0.35
SMARCE1-213ENST00000578044 MAELQ96JY0 434 aaKnown RBP12.85□□□□□ -0.35
SMARCE1-213ENST00000578044 OR5B2Q96R09 309 aa12.85□□□□□ -0.35
SMARCE1-213ENST00000578044 SLC35A5Q9BS91 424 aa12.85□□□□□ -0.35
SMARCE1-213ENST00000578044 NUF2Q9BZD4 464 aa12.85□□□□□ -0.35
SMARCE1-213ENST00000578044 GSX1Q9H4S2 264 aaPredicted RBP12.85□□□□□ -0.35
SMARCE1-213ENST00000578044 C12orf49Q9H741 205 aa12.85□□□□□ -0.35
SMARCE1-213ENST00000578044 THUMPD1Q9NXG2 353 aaKnown RBP12.85□□□□□ -0.35
SMARCE1-213ENST00000578044 GPR45Q9Y5Y3 372 aa12.85□□□□□ -0.35
SMARCE1-213ENST00000578044 WDR91A4D1P6 747 aa12.84□□□□□ -0.35
SMARCE1-213ENST00000578044 CCDC154A6NI56 674 aa12.84□□□□□ -0.35
SMARCE1-213ENST00000578044 SULT2B1O00204 365 aa12.84□□□□□ -0.35
SMARCE1-213ENST00000578044 SDHDO14521 159 aa12.84□□□□□ -0.35
SMARCE1-213ENST00000578044 KRT75O95678 551 aa12.84□□□□□ -0.35
SMARCE1-213ENST00000578044 IDO1P14902 403 aa12.84□□□□□ -0.35
SMARCE1-213ENST00000578044 BGNP21810 368 aa12.84□□□□□ -0.35
SMARCE1-213ENST00000578044 PAX7P23759 505 aa12.84□□□□□ -0.35
SMARCE1-213ENST00000578044 CHI3L1P36222 383 aaPredicted RBP12.84□□□□□ -0.35
SMARCE1-213ENST00000578044 CCR4P51679 360 aa12.84□□□□□ -0.35
SMARCE1-213ENST00000578044 HPCAP84074 193 aa12.84□□□□□ -0.35
SMARCE1-213ENST00000578044 GSTA3Q16772 222 aa12.84□□□□□ -0.35
SMARCE1-213ENST00000578044 NDUFAF6Q330K2 333 aa12.84□□□□□ -0.35
SMARCE1-213ENST00000578044 CLEC9AQ6UXN8 241 aa12.84□□□□□ -0.35
SMARCE1-213ENST00000578044 BHLHA15Q7RTS1 189 aaPredicted RBP12.84□□□□□ -0.35
SMARCE1-213ENST00000578044 WFDC8Q8IUA0 241 aa12.84□□□□□ -0.35
SMARCE1-213ENST00000578044 ARFGAP2Q8N6H7 521 aa12.84□□□□□ -0.35
SMARCE1-213ENST00000578044 SLC35B4Q969S0 331 aa12.84□□□□□ -0.35
SMARCE1-213ENST00000578044 FBXW5Q969U6 566 aa12.84□□□□□ -0.35
SMARCE1-213ENST00000578044 SLC38A1Q9H2H9 487 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms