RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 SPATA16Q9BXB7 569 aa2.79□□□□□ -1.96
CDC27-216ENST00000574304 HSD3B7Q9H2F3 369 aa2.79□□□□□ -1.96
CDC27-216ENST00000574304 DBNDD1Q9H9R9 158 aa2.79□□□□□ -1.96
CDC27-216ENST00000574304 C6orf203Q9P0P8 240 aaPredicted RBP2.79□□□□□ -1.96
CDC27-216ENST00000574304 PIN4Q9Y237 131 aaKnown RBP2.79□□□□□ -1.96
CDC27-216ENST00000574304 IGLV4-69A0A075B6H9 119 aa2.78□□□□□ -1.96
CDC27-216ENST00000574304 PPIAL4CA0A0B4J2A2 164 aa2.78□□□□□ -1.96
CDC27-216ENST00000574304 E7ESA3 106 aa2.78□□□□□ -1.96
CDC27-216ENST00000574304 KRTAP4-16G5E9R7 235 aaPredicted RBP2.78□□□□□ -1.96
CDC27-216ENST00000574304 PRKYO43930 277 aa2.78□□□□□ -1.96
CDC27-216ENST00000574304 OR10H3O60404 316 aa2.78□□□□□ -1.96
CDC27-216ENST00000574304 PPIAL4GP0DN37 164 aa2.78□□□□□ -1.96
CDC27-216ENST00000574304 CCR6P51684 374 aa2.78□□□□□ -1.96
CDC27-216ENST00000574304 PRKXP51817 358 aa2.78□□□□□ -1.96
CDC27-216ENST00000574304 ARL6IP1Q15041 203 aa2.78□□□□□ -1.96
CDC27-216ENST00000574304 DPY19L4Q7Z388 723 aa2.78□□□□□ -1.96
CDC27-216ENST00000574304 OR56B4Q8NH76 319 aa2.78□□□□□ -1.96
CDC27-216ENST00000574304 TCTEX1D2Q8WW35 142 aa2.78□□□□□ -1.96
CDC27-216ENST00000574304 SELENOMQ8WWX9 145 aa2.78□□□□□ -1.96
CDC27-216ENST00000574304 MYLPFQ96A32 169 aa2.78□□□□□ -1.96
CDC27-216ENST00000574304 CCDC47Q96A33 483 aaKnown RBP2.78□□□□□ -1.96
CDC27-216ENST00000574304 KCNK16Q96T55 309 aa2.78□□□□□ -1.96
CDC27-216ENST00000574304 NUFIP1Q9UHK0 495 aaKnown RBP2.78□□□□□ -1.96
CDC27-216ENST00000574304 KIF25Q9UIL4 384 aa2.78□□□□□ -1.96
CDC27-216ENST00000574304 IGHV3OR16-13A0A075B7E8 117 aa2.77□□□□□ -1.97
CDC27-216ENST00000574304 CLDN5O00501 218 aa2.77□□□□□ -1.97
CDC27-216ENST00000574304 PES1O00541 588 aaKnown RBP2.77□□□□□ -1.97
CDC27-216ENST00000574304 DLGAP1O14490 977 aa2.77□□□□□ -1.97
CDC27-216ENST00000574304 RIPK2O43353 540 aa2.77□□□□□ -1.97
CDC27-216ENST00000574304 LANCL1O43813 399 aa2.77□□□□□ -1.97
CDC27-216ENST00000574304 PCCBP05166 539 aa2.77□□□□□ -1.97
CDC27-216ENST00000574304 ARF4P18085 180 aaPredicted RBP2.77□□□□□ -1.97
CDC27-216ENST00000574304 TPSB2P20231 275 aa2.77□□□□□ -1.97
CDC27-216ENST00000574304 IL10P22301 178 aa2.77□□□□□ -1.97
CDC27-216ENST00000574304 PSMA2P25787 234 aa2.77□□□□□ -1.97
CDC27-216ENST00000574304 BIDP55957 195 aa2.77□□□□□ -1.97
CDC27-216ENST00000574304 KRTAP10-10P60014 251 aa2.77□□□□□ -1.97
CDC27-216ENST00000574304 EWSR1Q01844 656 aaKnown RBP eCLIP2.77□□□□□ -1.97
CDC27-216ENST00000574304 EIF4EBP1Q13541 118 aaPredicted RBP2.77□□□□□ -1.97
CDC27-216ENST00000574304 TPSAB1Q15661 275 aa2.77□□□□□ -1.97
CDC27-216ENST00000574304 ATL3Q6DD88 541 aa2.77□□□□□ -1.97
CDC27-216ENST00000574304 UNC5DQ6UXZ4 953 aa2.77□□□□□ -1.97
CDC27-216ENST00000574304 SYT10Q6XYQ8 523 aa2.77□□□□□ -1.97
CDC27-216ENST00000574304 RFLNAQ6ZTI6 216 aa2.77□□□□□ -1.97
CDC27-216ENST00000574304 COX15Q7KZN9 410 aa2.77□□□□□ -1.97
CDC27-216ENST00000574304 KIR3DL3Q8N743 410 aa2.77□□□□□ -1.97
CDC27-216ENST00000574304 RPL3LQ92901 407 aaKnown RBP2.77□□□□□ -1.97
CDC27-216ENST00000574304 KCNA7Q96RP8 456 aa2.77□□□□□ -1.97
CDC27-216ENST00000574304 TSG101Q99816 390 aa2.77□□□□□ -1.97
CDC27-216ENST00000574304 SCRT1Q9BWW7 348 aa2.77□□□□□ -1.97
CDC27-216ENST00000574304 AIPL1Q9NZN9 384 aa2.77□□□□□ -1.97
CDC27-216ENST00000574304 ALG6Q9Y672 507 aa2.77□□□□□ -1.97
CDC27-216ENST00000574304 ZNFX1Q9P2E3 1918 aaKnown RBP2.77□□□□□ -1.97
CDC27-216ENST00000574304 FRMPD4Q14CM0 1322 aa2.76□□□□□ -1.97
CDC27-216ENST00000574304 IGHV3-64DA0A0J9YX35 117 aa2.76□□□□□ -1.97
CDC27-216ENST00000574304 KRT87PA6NCN2 255 aa2.76□□□□□ -1.97
CDC27-216ENST00000574304 VSTM2BA6NLU5 285 aa2.76□□□□□ -1.97
CDC27-216ENST00000574304 MSH4O15457 936 aa2.76□□□□□ -1.97
CDC27-216ENST00000574304 KIAA0754O94854 1291 aa2.76□□□□□ -1.97
CDC27-216ENST00000574304 SLC25A27O95847 323 aa2.76□□□□□ -1.97
CDC27-216ENST00000574304 LGI1O95970 557 aa2.76□□□□□ -1.97
CDC27-216ENST00000574304 ADRB3P13945 408 aa2.76□□□□□ -1.97
CDC27-216ENST00000574304 MAGP20916 626 aa2.76□□□□□ -1.97
CDC27-216ENST00000574304 CCND2P30279 289 aa2.76□□□□□ -1.97
CDC27-216ENST00000574304 TAS2R19P59542 299 aa2.76□□□□□ -1.97
CDC27-216ENST00000574304 SELENOTP62341 195 aa2.76□□□□□ -1.97
CDC27-216ENST00000574304 TGFBR3Q03167 851 aa2.76□□□□□ -1.97
CDC27-216ENST00000574304 GGTLC2Q14390 218 aa2.76□□□□□ -1.97
CDC27-216ENST00000574304 NRF1Q16656 503 aa2.76□□□□□ -1.97
CDC27-216ENST00000574304 KLF17Q5JT82 389 aaPredicted RBP2.76□□□□□ -1.97
CDC27-216ENST00000574304 C12orf60Q5U649 245 aa2.76□□□□□ -1.97
CDC27-216ENST00000574304 CBLN3Q6UW01 205 aa2.76□□□□□ -1.97
CDC27-216ENST00000574304 TPRA1Q86W33 373 aa2.76□□□□□ -1.97
CDC27-216ENST00000574304 ZNF561Q8N587 486 aa2.76□□□□□ -1.97
CDC27-216ENST00000574304 KIR2DL5BQ8NHK3 375 aa2.76□□□□□ -1.97
CDC27-216ENST00000574304 MRPL13Q9BYD1 178 aaKnown RBP2.76□□□□□ -1.97
CDC27-216ENST00000574304 PLA2G2FQ9BZM2 168 aa2.76□□□□□ -1.97
CDC27-216ENST00000574304 SMYD3Q9H7B4 428 aa2.76□□□□□ -1.97
CDC27-216ENST00000574304 NECAP2Q9NVZ3 263 aa2.76□□□□□ -1.97
CDC27-216ENST00000574304 MAD1L1Q9Y6D9 718 aa2.76□□□□□ -1.97
CDC27-216ENST00000574304 CLCA3PQ9Y6N3 262 aa2.76□□□□□ -1.97
CDC27-216ENST00000574304 MYO10Q9HD67 2058 aa2.76□□□□□ -1.97
CDC27-216ENST00000574304 MTCL1Q9Y4B5 1905 aaKnown RBP2.76□□□□□ -1.97
CDC27-216ENST00000574304 SPRR5A0A1B0GTR4 108 aa2.75□□□□□ -1.97
CDC27-216ENST00000574304 A0A1B0GUL7 405 aa2.75□□□□□ -1.97
CDC27-216ENST00000574304 LRCOL1A6NCL2 159 aa2.75□□□□□ -1.97
CDC27-216ENST00000574304 CTAGE5O15320 804 aa2.75□□□□□ -1.97
CDC27-216ENST00000574304 MBD3O95983 291 aa2.75□□□□□ -1.97
CDC27-216ENST00000574304 CA1P00915 261 aaPredicted RBP2.75□□□□□ -1.97
CDC27-216ENST00000574304 P04436 131 aa2.75□□□□□ -1.97
CDC27-216ENST00000574304 GIPP09681 153 aaPredicted RBP2.75□□□□□ -1.97
CDC27-216ENST00000574304 RBMY1CP0DJD4 496 aa2.75□□□□□ -1.97
CDC27-216ENST00000574304 CRISP2P16562 243 aa2.75□□□□□ -1.97
CDC27-216ENST00000574304 TNNI3P19429 210 aa2.75□□□□□ -1.97
CDC27-216ENST00000574304 PGCP20142 388 aa2.75□□□□□ -1.97
CDC27-216ENST00000574304 TBXA2RP21731 343 aa2.75□□□□□ -1.97
CDC27-216ENST00000574304 LEPP41159 167 aa2.75□□□□□ -1.97
CDC27-216ENST00000574304 CAMLGP49069 296 aa2.75□□□□□ -1.97
CDC27-216ENST00000574304 KLK7P49862 253 aa2.75□□□□□ -1.97
CDC27-216ENST00000574304 HNRNPA3P51991 378 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms