RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 SERINC2Q96SA4 455 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 BEX1Q9HBH7 125 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 TMEM27Q9HBJ8 222 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 TMEM74BQ9NUR3 256 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 DAPP1Q9UN19 280 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 CAMK2AQ9UQM7 478 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 STON1Q9Y6Q2 735 aa14.45□□□□□ -0.1
NUP88-207ENST00000573584 LRRC72A6NJI9 287 aa14.44□□□□□ -0.1
NUP88-207ENST00000573584 HYAL3O43820 417 aaPredicted RBP14.44□□□□□ -0.1
NUP88-207ENST00000573584 B3GALT2O43825 422 aa14.44□□□□□ -0.1
NUP88-207ENST00000573584 KCNJ13O60928 360 aa14.44□□□□□ -0.1
NUP88-207ENST00000573584 KAT7O95251 611 aa14.44□□□□□ -0.1
NUP88-207ENST00000573584 DRD5P21918 477 aa14.44□□□□□ -0.1
NUP88-207ENST00000573584 LGALSLQ3ZCW2 172 aaPredicted RBP14.44□□□□□ -0.1
NUP88-207ENST00000573584 HSD17B12Q53GQ0 312 aa14.44□□□□□ -0.1
NUP88-207ENST00000573584 SLC22A10Q63ZE4 541 aa14.44□□□□□ -0.1
NUP88-207ENST00000573584 PSRC1Q6PGN9 363 aaPredicted RBP14.44□□□□□ -0.1
NUP88-207ENST00000573584 RTL4Q6ZR62 310 aa14.44□□□□□ -0.1
NUP88-207ENST00000573584 BTN2A1Q7KYR7 527 aa14.44□□□□□ -0.1
NUP88-207ENST00000573584 SPRED2Q7Z698 418 aa14.44□□□□□ -0.1
NUP88-207ENST00000573584 IZUMO1Q8IYV9 350 aa14.44□□□□□ -0.1
NUP88-207ENST00000573584 PIAS4Q8N2W9 510 aaPredicted RBP14.44□□□□□ -0.1
NUP88-207ENST00000573584 ARL14Q8N4G2 192 aa14.44□□□□□ -0.1
NUP88-207ENST00000573584 OR51Q1Q8NH59 317 aa14.44□□□□□ -0.1
NUP88-207ENST00000573584 ZNF671Q8TAW3 534 aa14.44□□□□□ -0.1
NUP88-207ENST00000573584 NT5CQ8TCD5 201 aa14.44□□□□□ -0.1
NUP88-207ENST00000573584 SMARCD2Q92925 531 aa14.44□□□□□ -0.1
NUP88-207ENST00000573584 HGDQ93099 445 aa14.44□□□□□ -0.1
NUP88-207ENST00000573584 DPCDQ9BVM2 203 aaPredicted RBP14.44□□□□□ -0.1
NUP88-207ENST00000573584 RSPH9Q9H1X1 276 aaPredicted RBP14.44□□□□□ -0.1
NUP88-207ENST00000573584 CXXC1Q9P0U4 656 aaPredicted RBP14.44□□□□□ -0.1
NUP88-207ENST00000573584 AK6Q9Y3D8 172 aaKnown RBP14.44□□□□□ -0.1
NUP88-207ENST00000573584 PTPRSQ13332 1948 aa14.44□□□□□ -0.1
NUP88-207ENST00000573584 MEIKINA0A087WXM9 373 aa14.44□□□□□ -0.1
NUP88-207ENST00000573584 A0A1B0GVI7 797 aa14.44□□□□□ -0.1
NUP88-207ENST00000573584 ARL6IP5O75915 188 aa14.44□□□□□ -0.1
NUP88-207ENST00000573584 WNT1P04628 370 aa14.44□□□□□ -0.1
NUP88-207ENST00000573584 SULT1A3P0DMM9 295 aa14.44□□□□□ -0.1
NUP88-207ENST00000573584 SULT1A4P0DMN0 295 aa14.44□□□□□ -0.1
NUP88-207ENST00000573584 DNASE1P24855 282 aa14.44□□□□□ -0.1
NUP88-207ENST00000573584 SSTR2P30874 369 aa14.44□□□□□ -0.1
NUP88-207ENST00000573584 GDI2P50395 445 aaKnown RBP14.44□□□□□ -0.1
NUP88-207ENST00000573584 ZNF81P51508 661 aa14.44□□□□□ -0.1
NUP88-207ENST00000573584 RAG2P55895 527 aa14.44□□□□□ -0.1
NUP88-207ENST00000573584 POU4F2Q12837 409 aa14.44□□□□□ -0.1
NUP88-207ENST00000573584 WDR45BQ5MNZ6 344 aa14.44□□□□□ -0.1
NUP88-207ENST00000573584 ZMYND19Q96E35 227 aaPredicted RBP14.44□□□□□ -0.1
NUP88-207ENST00000573584 C7orf50Q9BRJ6 194 aaKnown RBP14.44□□□□□ -0.1
NUP88-207ENST00000573584 ORAI3Q9BRQ5 295 aa14.44□□□□□ -0.1
NUP88-207ENST00000573584 NKIRAS2Q9NYR9 191 aa14.44□□□□□ -0.1
NUP88-207ENST00000573584 EIF3KQ9UBQ5 218 aaKnown RBP14.44□□□□□ -0.1
NUP88-207ENST00000573584 HEBP2Q9Y5Z4 205 aa14.44□□□□□ -0.1
NUP88-207ENST00000573584 CDH23Q9H251 3354 aa14.44□□□□□ -0.1
NUP88-207ENST00000573584 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.43□□□□□ -0.1
NUP88-207ENST00000573584 ZNF860A6NHJ4 632 aa14.43□□□□□ -0.1
NUP88-207ENST00000573584 LDB3O75112 727 aa14.43□□□□□ -0.1
NUP88-207ENST00000573584 M6PRP20645 277 aa14.43□□□□□ -0.1
NUP88-207ENST00000573584 NT5EP21589 574 aa14.43□□□□□ -0.1
NUP88-207ENST00000573584 RPS21P63220 83 aaKnown RBP14.43□□□□□ -0.1
NUP88-207ENST00000573584 HSF2Q03933 536 aa14.43□□□□□ -0.1
NUP88-207ENST00000573584 ZSWIM7Q19AV6 140 aa14.43□□□□□ -0.1
NUP88-207ENST00000573584 FHL5Q5TD97 284 aa14.43□□□□□ -0.1
NUP88-207ENST00000573584 TMEFF1Q8IYR6 380 aa14.43□□□□□ -0.1
NUP88-207ENST00000573584 CDRT4Q8N9R6 151 aa14.43□□□□□ -0.1
NUP88-207ENST00000573584 OR56B4Q8NH76 319 aa14.43□□□□□ -0.1
NUP88-207ENST00000573584 PELI1Q96FA3 418 aa14.43□□□□□ -0.1
NUP88-207ENST00000573584 ACTR6Q9GZN1 396 aa14.43□□□□□ -0.1
NUP88-207ENST00000573584 NARFLQ9H6Q4 476 aa14.43□□□□□ -0.1
NUP88-207ENST00000573584 DUSP22Q9NRW4 184 aa14.43□□□□□ -0.1
NUP88-207ENST00000573584 TBC1D29Q9UFV1 150 aa14.43□□□□□ -0.1
NUP88-207ENST00000573584 SPATA2Q9UM82 520 aa14.43□□□□□ -0.1
NUP88-207ENST00000573584 SATB2Q9UPW6 733 aa14.43□□□□□ -0.1
NUP88-207ENST00000573584 OGG1O15527 345 aa14.43□□□□□ -0.1
NUP88-207ENST00000573584 P2RX6O15547 441 aa14.43□□□□□ -0.1
NUP88-207ENST00000573584 IFNGP01579 166 aa14.43□□□□□ -0.1
NUP88-207ENST00000573584 PDGFAP04085 211 aa14.43□□□□□ -0.1
NUP88-207ENST00000573584 C5AR1P21730 350 aa14.43□□□□□ -0.1
NUP88-207ENST00000573584 MAT2AP31153 395 aaKnown RBP14.43□□□□□ -0.1
NUP88-207ENST00000573584 GBX2P52951 348 aaPredicted RBP14.43□□□□□ -0.1
NUP88-207ENST00000573584 SNTA1Q13424 505 aa14.43□□□□□ -0.1
NUP88-207ENST00000573584 KLF9Q13886 244 aaPredicted RBP14.43□□□□□ -0.1
NUP88-207ENST00000573584 POU4F3Q15319 338 aa14.43□□□□□ -0.1
NUP88-207ENST00000573584 OR51L1Q8NGJ5 315 aa14.43□□□□□ -0.1
NUP88-207ENST00000573584 MARVELD3Q96A59 401 aa14.43□□□□□ -0.1
NUP88-207ENST00000573584 SMIM19Q96E16 107 aa14.43□□□□□ -0.1
NUP88-207ENST00000573584 SLC17A9Q9BYT1 436 aa14.43□□□□□ -0.1
NUP88-207ENST00000573584 SPRTNQ9H040 489 aaPredicted RBP14.43□□□□□ -0.1
NUP88-207ENST00000573584 CLEC4MQ9H2X3 399 aaPredicted RBP14.43□□□□□ -0.1
NUP88-207ENST00000573584 ZCCHC4Q9H5U6 513 aa14.43□□□□□ -0.1
NUP88-207ENST00000573584 DLL4Q9NR61 685 aa14.43□□□□□ -0.1
NUP88-207ENST00000573584 KLF15Q9UIH9 416 aa14.43□□□□□ -0.1
NUP88-207ENST00000573584 BAIAP2Q9UQB8 552 aa14.43□□□□□ -0.1
NUP88-207ENST00000573584 SLC22A7Q9Y694 548 aa14.43□□□□□ -0.1
NUP88-207ENST00000573584 A0A1W2PQU0 124 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 ZNF593O00488 134 aaPredicted RBP14.42□□□□□ -0.1
NUP88-207ENST00000573584 TPD52L2O43399 206 aaKnown RBP14.42□□□□□ -0.1
NUP88-207ENST00000573584 EML2O95834 649 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 UGT2B7P16662 529 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 GDNFP39905 211 aa14.42□□□□□ -0.1
NUP88-207ENST00000573584 DYRK1AQ13627 763 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms