RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 SMAD9O15198 467 aaKnown RBP8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 CLOCKO15516 846 aa8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 GCM2O75603 506 aaPredicted RBP8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 ADAP00813 363 aa8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 NR2F1P10589 423 aa8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 IDO1P14902 403 aa8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 FOSL1P15407 271 aa8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 CCNA2P20248 432 aa8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 IL12AP29459 219 aa8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 HOXC12P31275 282 aa8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 PGM1P36871 562 aa8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 APOBEC1P41238 236 aaKnown RBP8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 CDKN2CP42773 168 aa8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 DIO1P49895 249 aa8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 WDR4P57081 412 aaKnown RBP8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 KCNJ10P78508 379 aa8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 CHRNEQ04844 493 aa8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 LRRC74AQ0VAA2 488 aa8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 GNA13Q14344 377 aa8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 STK11Q15831 433 aa8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 SYPL1Q16563 259 aa8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 ZNF100Q8IYN0 542 aa8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 GLB1L3Q8NCI6 653 aaPredicted RBP8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 RAB3IL1Q8TBN0 382 aa8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 TMEM171Q8WVE6 324 aa8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 WDR60Q8WVS4 1066 aa8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 OIT3Q8WWZ8 545 aa8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 ZNF524Q96C55 264 aa8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 C18orf12Q96KH6 178 aa8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 Q96MF0 132 aa8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 ZNF300Q96RE9 604 aaPredicted RBP8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 PIP5K1AQ99755 562 aa8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 INPP5KQ9BT40 448 aa8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 HDHD5Q9BXW7 423 aa8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 OR10A4Q9H209 315 aa8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 GSX1Q9H4S2 264 aaPredicted RBP8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 HEATR1Q9H583 2144 aaKnown RBP8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 CACYBPQ9HB71 228 aaKnown RBP8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 NGBQ9NPG2 151 aa8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 ACER3Q9NUN7 267 aa8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 EMC3Q9P0I2 261 aa8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 CHRNA9Q9UGM1 479 aa8.58□□□□□ -1.04
NPLOC4-212ENST00000573328 ETV2O00321 342 aaPredicted RBP8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 KLF4O43474 513 aa8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 CYTIPO60759 359 aa8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 SNNO75324 88 aaPredicted RBP8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 BCAS1O75363 584 aaPredicted RBP8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 SLC22A3O75751 556 aa8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 LYZL6O75951 148 aa8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 KRT75O95678 551 aa8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 PLAUP00749 431 aa8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 INHBBP09529 407 aa8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 NID1P14543 1247 aa8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 UQCRBP14927 111 aa8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 IL7RP16871 459 aa8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 LOXP28300 417 aaPredicted RBP8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 OR3A2P47893 321 aa8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 IDH2P48735 452 aaKnown RBP8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 TXNL4AP83876 142 aaKnown RBP8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 ITGADQ13349 1161 aa8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 SLC9B1Q4ZJI4 515 aa8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 SFRP5Q5T4F7 317 aa8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 TMPPEQ6ZT21 453 aa8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 Q71RC1 249 aaPredicted RBP8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 BHLHA15Q7RTS1 189 aaPredicted RBP8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 GRINAQ7Z429 371 aa8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 YTHDF3Q7Z739 585 aaKnown RBP8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 GALNT5Q7Z7M9 940 aa8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 BIVMQ86UB2 503 aa8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 GABRG1Q8N1C3 465 aa8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 LRRC75A-AS1Q8N1F1 130 aa8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 UBE2J2Q8N2K1 259 aa8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 ANKFN1Q8N957 763 aa8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 FAM71CQ8NEG0 241 aa8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 TRNT1Q96Q11 434 aaKnown RBP8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 SAP130Q9H0E3 1048 aa8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 CXorf56Q9H5V9 222 aa8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 ESRP2Q9H6T0 727 aaKnown RBP8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 MANSC1Q9H8J5 431 aa8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 BCO1Q9HAY6 547 aa8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 EXOSC3Q9NQT5 275 aaKnown RBP8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 DLL4Q9NR61 685 aa8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 P2RX2Q9UBL9 471 aa8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 PRSS50Q9UI38 385 aa8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 LIPT1Q9Y234 373 aa8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 RNF115Q9Y4L5 304 aa8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 GPR45Q9Y5Y3 372 aa8.57□□□□□ -1.04
NPLOC4-212ENST00000573328 PRAMEF27A3QJZ7 478 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 TMEM247A6NEH6 219 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 AP3D1O14617 1153 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 HS3ST1O14792 307 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 SMAD7O15105 426 aaKnown RBP8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 DNAJA2O60884 412 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 C1QCP02747 245 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 IL6P05231 212 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 BCHEP06276 602 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 CD3EP07766 207 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 CHRM4P08173 479 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 GUSBP08236 651 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 CRATP43155 626 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms