RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 GUSBP08236 651 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 GKN3PP0CG01 181 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 NID1P14543 1247 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 ENDOUP21128 410 aaKnown RBP12□□□□□ -0.49
CCDC40-205ENST00000571028 BMP5P22003 454 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 RPS4Y1P22090 263 aaKnown RBP12□□□□□ -0.49
CCDC40-205ENST00000571028 CALB2P22676 271 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 GCKP35557 465 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 PGM1P36871 562 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 STARP49675 285 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 ASCL1P50553 236 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 MNAT1P51948 309 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 SRYQ05066 204 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 TOMM34Q15785 309 aaPredicted RBP12□□□□□ -0.49
CCDC40-205ENST00000571028 HSPB2Q16082 182 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 LRRC23Q53EV4 343 aaPredicted RBP12□□□□□ -0.49
CCDC40-205ENST00000571028 RIPPLY2Q5TAB7 128 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 PRAMEF8Q5VWM4 474 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 PRAMEF7Q5VXH5 474 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 POMZP3Q6PJE2 187 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 CALHM3Q86XJ0 350 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 ARMC8Q8IUR7 673 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 P3H2Q8IVL5 708 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 MICU2Q8IYU8 434 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 ATP6V1C2Q8NEY4 427 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 NEIL3Q8TAT5 605 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 FIG4Q92562 907 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 SARAFQ96BY9 339 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 DTNBP1Q96EV8 351 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 REXO5Q96IC2 774 aaKnown RBP12□□□□□ -0.49
CCDC40-205ENST00000571028 CDRT15Q96T59 188 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 NPAS1Q99742 590 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 KCTD14Q9BQ13 255 aaPredicted RBP12□□□□□ -0.49
CCDC40-205ENST00000571028 SPATA5L1Q9BVQ7 753 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 OR2B2Q9GZK3 357 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 ACKR4Q9NPB9 350 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 SPAG4Q9NPE6 437 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 MED17Q9NVC6 651 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 SPRR3Q9UBC9 169 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 SLC13A4Q9UKG4 626 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 ICAM5Q9UMF0 924 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 GPC6Q9Y625 555 aaPredicted RBP12□□□□□ -0.49
CCDC40-205ENST00000571028 DSPPQ9NZW4 1301 aa12□□□□□ -0.49
CCDC40-205ENST00000571028 VPS13CQ709C8 3753 aa11.99□□□□□ -0.49
CCDC40-205ENST00000571028 IGLV3-32A0A0A0MS00 114 aa11.99□□□□□ -0.49
CCDC40-205ENST00000571028 ELOVL7A1L3X0 281 aa11.99□□□□□ -0.49
CCDC40-205ENST00000571028 H3BML4 177 aa11.99□□□□□ -0.49
CCDC40-205ENST00000571028 SMAD7O15105 426 aaKnown RBP11.99□□□□□ -0.49
CCDC40-205ENST00000571028 TPST1O60507 370 aa11.99□□□□□ -0.49
CCDC40-205ENST00000571028 HCN1O60741 890 aa11.99□□□□□ -0.49
CCDC40-205ENST00000571028 SERPINB7O75635 380 aa11.99□□□□□ -0.49
CCDC40-205ENST00000571028 IGHG3P01860 377 aa11.99□□□□□ -0.49
CCDC40-205ENST00000571028 T-ENOLP0DO92 83 aa11.99□□□□□ -0.49
CCDC40-205ENST00000571028 GABRA1P14867 456 aa11.99□□□□□ -0.49
CCDC40-205ENST00000571028 NCK1P16333 377 aa11.99□□□□□ -0.49
CCDC40-205ENST00000571028 BMP7P18075 431 aa11.99□□□□□ -0.49
CCDC40-205ENST00000571028 GSK3BP49841 420 aa11.99□□□□□ -0.49
CCDC40-205ENST00000571028 HOXC5Q00444 222 aa11.99□□□□□ -0.49
CCDC40-205ENST00000571028 SKP2Q13309 424 aa11.99□□□□□ -0.49
CCDC40-205ENST00000571028 CBFBQ13951 182 aa11.99□□□□□ -0.49
CCDC40-205ENST00000571028 DAZAP2Q15038 168 aaPredicted RBP11.99□□□□□ -0.49
CCDC40-205ENST00000571028 QPRTQ15274 297 aa11.99□□□□□ -0.49
CCDC40-205ENST00000571028 INTS11Q5TA45 600 aaKnown RBP11.99□□□□□ -0.49
CCDC40-205ENST00000571028 RTL6Q6ICC9 239 aa11.99□□□□□ -0.49
CCDC40-205ENST00000571028 C8orf82Q6P1X6 216 aaPredicted RBP11.99□□□□□ -0.49
CCDC40-205ENST00000571028 ERICH5Q6P6B1 374 aa11.99□□□□□ -0.49
CCDC40-205ENST00000571028 LSRQ86X29 649 aaPredicted RBP11.99□□□□□ -0.49
CCDC40-205ENST00000571028 UBQLNLQ8IYU4 475 aa11.99□□□□□ -0.49
CCDC40-205ENST00000571028 PGAM4Q8N0Y7 254 aa11.99□□□□□ -0.49
CCDC40-205ENST00000571028 FAM156AQ8NDB6 213 aa11.99□□□□□ -0.49
CCDC40-205ENST00000571028 RBM15BQ8NDT2 890 aaKnown RBP11.99□□□□□ -0.49
CCDC40-205ENST00000571028 OR5W2Q8NH69 310 aa11.99□□□□□ -0.49
CCDC40-205ENST00000571028 GPR119Q8TDV5 335 aa11.99□□□□□ -0.49
CCDC40-205ENST00000571028 PMM1Q92871 262 aa11.99□□□□□ -0.49
CCDC40-205ENST00000571028 RNASE6Q93091 150 aaKnown RBP11.99□□□□□ -0.49
CCDC40-205ENST00000571028 ABTB1Q969K4 478 aaPredicted RBP11.99□□□□□ -0.49
CCDC40-205ENST00000571028 COX4I2Q96KJ9 171 aa11.99□□□□□ -0.49
CCDC40-205ENST00000571028 SPATA9Q9BWV2 254 aa11.99□□□□□ -0.49
CCDC40-205ENST00000571028 ALG2Q9H553 416 aa11.99□□□□□ -0.49
CCDC40-205ENST00000571028 ARMC7Q9H6L4 198 aa11.99□□□□□ -0.49
CCDC40-205ENST00000571028 HHATLQ9HCP6 504 aa11.99□□□□□ -0.49
CCDC40-205ENST00000571028 FOXD3Q9UJU5 478 aaPredicted RBP11.99□□□□□ -0.49
CCDC40-205ENST00000571028 AP3M1Q9Y2T2 418 aa11.99□□□□□ -0.49
CCDC40-205ENST00000571028 PRORSD1PA6NEY8 169 aa11.98□□□□□ -0.49
CCDC40-205ENST00000571028 H7C1Q1 480 aa11.98□□□□□ -0.49
CCDC40-205ENST00000571028 AQP7O14520 342 aa11.98□□□□□ -0.49
CCDC40-205ENST00000571028 AP3D1O14617 1153 aa11.98□□□□□ -0.49
CCDC40-205ENST00000571028 SUSD5O60279 629 aa11.98□□□□□ -0.49
CCDC40-205ENST00000571028 GCM2O75603 506 aaPredicted RBP11.98□□□□□ -0.49
CCDC40-205ENST00000571028 MFN2O95140 757 aa11.98□□□□□ -0.49
CCDC40-205ENST00000571028 C8BP07358 591 aa11.98□□□□□ -0.49
CCDC40-205ENST00000571028 THBS1P07996 1170 aa11.98□□□□□ -0.49
CCDC40-205ENST00000571028 LINGO3P0C6S8 592 aa11.98□□□□□ -0.49
CCDC40-205ENST00000571028 PEPDP12955 493 aa11.98□□□□□ -0.49
CCDC40-205ENST00000571028 ETS2P15036 469 aa11.98□□□□□ -0.49
CCDC40-205ENST00000571028 PGCP20142 388 aa11.98□□□□□ -0.49
CCDC40-205ENST00000571028 CCNA2P20248 432 aa11.98□□□□□ -0.49
CCDC40-205ENST00000571028 MSX2P35548 267 aaPredicted RBP11.98□□□□□ -0.49
CCDC40-205ENST00000571028 IDH2P48735 452 aaKnown RBP11.98□□□□□ -0.49
CCDC40-205ENST00000571028 SUMO3P55854 103 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms