RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 MAGED1Q9Y5V3 778 aaPredicted RBP14□□□□□ -0.17
HERPUD1-219ENST00000570273 A0A087WZY1 265 aa13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 SH3PXD2BA1X283 911 aa13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 KLRC4-KLRK1H3BQV0 150 aa13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 EI24O14681 340 aa13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 OR10H3O60404 316 aa13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 CBR3O75828 277 aa13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 ITGB2P05107 769 aa13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 PNMTP11086 282 aa13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 PRKCAP17252 672 aa13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 HK1P19367 917 aa13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 DPP4P27487 766 aa13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 VHLP40337 213 aa13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 POLR2HP52434 150 aaKnown RBP13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 DSCR4P56555 118 aaPredicted RBP13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 PLGLB1Q02325 96 aa13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 FOXO1Q12778 655 aa13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 MICAQ29983 383 aa13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 PLPPR5Q32ZL2 321 aa13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 POMZP3Q6PJE2 187 aa13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 WDR88Q6ZMY6 472 aa13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 ATG4DQ86TL0 474 aaPredicted RBP13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 LSRQ86X29 649 aaPredicted RBP13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 OR4K5Q8NGD3 323 aa13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 OR9Q2Q8NGE9 314 aa13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 ACOT11Q8WXI4 607 aaPredicted RBP13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 DTNBP1Q96EV8 351 aa13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 PRSS27Q9BQR3 290 aa13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 FUZQ9BT04 418 aa13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 KLHL4Q9C0H6 718 aa13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 ADAM19Q9H013 955 aa13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 GABARAPL1Q9H0R8 117 aa13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 VCXQ9H320 206 aa13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 COQ10BQ9H8M1 238 aa13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 C12orf10Q9HB07 376 aa13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 B4GALT7Q9UBV7 327 aa13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 PCDHGB7Q9Y5F8 929 aa13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 NBEAQ8NFP9 2946 aa13.99□□□□□ -0.17
HERPUD1-219ENST00000570273 A0A087WUU8 490 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 SHISA8B8ZZ34 492 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 KPNA4O00629 521 aaPredicted RBP13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 SOCS2O14508 198 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 RASAL1O95294 804 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 PRKACGP22612 351 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 CXCR1P25024 350 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 GDF1P27539 372 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 RFC3P40938 356 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 RBM34P42696 430 aaKnown RBP13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 HTR3AP46098 478 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 CD97P48960 835 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 UGT2B15P54855 530 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 TOMM20Q15388 145 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 ST3GAL2Q16842 350 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 TBPL2Q6SJ96 375 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 IGFL3Q6UXB1 125 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 RRM2BQ7LG56 351 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 ATG16L2Q8NAA4 619 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 PIGXQ8TBF5 258 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 TMEM239Q8WW34 195 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 HS6ST2Q96MM7 605 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 OSGIN1Q9UJX0 560 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 PTPRQQ9UMZ3 2332 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 A0A087WUJ7 227 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 TMED7-TICAM2A0A0A6YYA0 188 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 ARRDC5A6NEK1 342 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 FAM166BA8MTA8 275 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 ETV2O00321 342 aaPredicted RBP13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 PIP5K1CO60331 668 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 PDGFAP04085 211 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 RFPL3SP0C7P2 107 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 CCNA2P20248 432 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 SRD5A2P31213 254 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 GCKP35557 465 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 DAG1Q14118 895 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 SLC25A53Q5H9E4 307 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 TTC33Q6PID6 262 aaPredicted RBP13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 MBOAT2Q6ZWT7 520 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 NRMQ8IXM6 262 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 GALNT4Q8N4A0 578 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 LINC00471Q8N535 108 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 AQP11Q8NBQ7 271 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 ZBTB8AQ96BR9 441 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 MRGPRX4Q96LA9 322 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 SLC29A1Q99808 456 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 RBM4BQ9BQ04 359 aaKnown RBP13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 RBM4Q9BWF3 364 aaKnown RBP13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 TTTY12Q9BZ98 90 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 ZNF703Q9H7S9 590 aaPredicted RBP13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 SMURF2Q9HAU4 748 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 KRCC1Q9NPI7 259 aaPredicted RBP13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 C8orf4Q9NR00 106 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 RPH3AQ9Y2J0 694 aaPredicted RBP13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 TMED7Q9Y3B3 224 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 PCDHGB6Q9Y5F9 930 aa13.98□□□□□ -0.17
HERPUD1-219ENST00000570273 SUSD5O60279 629 aa13.97□□□□□ -0.17
HERPUD1-219ENST00000570273 IFNGR2P38484 337 aa13.97□□□□□ -0.17
HERPUD1-219ENST00000570273 EIF1P41567 113 aaKnown RBP13.97□□□□□ -0.17
HERPUD1-219ENST00000570273 DLX5P56178 289 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 914.1 ms