RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 CAPRIN1Q14444 709 aaKnown RBP20.01■□□□□ 0.79
RBFOX1-219ENST00000569895 SYT14P1Q58G82 188 aa20.01■□□□□ 0.79
RBFOX1-219ENST00000569895 FRRS1Q6ZNA5 592 aa20.01■□□□□ 0.79
RBFOX1-219ENST00000569895 Q6ZT83 130 aa20.01■□□□□ 0.79
RBFOX1-219ENST00000569895 SSX8Q7RTT4 187 aa20.01■□□□□ 0.79
RBFOX1-219ENST00000569895 GALNT5Q7Z7M9 940 aa20.01■□□□□ 0.79
RBFOX1-219ENST00000569895 ARFGAP2Q8N6H7 521 aa20.01■□□□□ 0.79
RBFOX1-219ENST00000569895 FAM71CQ8NEG0 241 aa20.01■□□□□ 0.79
RBFOX1-219ENST00000569895 TRNT1Q96Q11 434 aaKnown RBP20.01■□□□□ 0.79
RBFOX1-219ENST00000569895 OR52E6Q96RD3 313 aa20.01■□□□□ 0.79
RBFOX1-219ENST00000569895 EXOSC3Q9NQT5 275 aaKnown RBP20.01■□□□□ 0.79
RBFOX1-219ENST00000569895 AIG1Q9NVV5 245 aa20.01■□□□□ 0.79
RBFOX1-219ENST00000569895 EMC3Q9P0I2 261 aa20.01■□□□□ 0.79
RBFOX1-219ENST00000569895 NF1P21359 2839 aa20■□□□□ 0.79
RBFOX1-219ENST00000569895 CCDC154A6NI56 674 aa20■□□□□ 0.79
RBFOX1-219ENST00000569895 ZNF814B7Z6K7 855 aa20■□□□□ 0.79
RBFOX1-219ENST00000569895 SLCO1B7G3V0H7 640 aa20■□□□□ 0.79
RBFOX1-219ENST00000569895 SMAD9O15198 467 aaKnown RBP20■□□□□ 0.79
RBFOX1-219ENST00000569895 HDAC3O15379 428 aa20■□□□□ 0.79
RBFOX1-219ENST00000569895 H6PDO95479 791 aa20■□□□□ 0.79
RBFOX1-219ENST00000569895 CNOT4O95628 575 aaKnown RBP20■□□□□ 0.79
RBFOX1-219ENST00000569895 PLAUP00749 431 aa20■□□□□ 0.79
RBFOX1-219ENST00000569895 PGRP06401 933 aa20■□□□□ 0.79
RBFOX1-219ENST00000569895 RYKP34925 604 aa20■□□□□ 0.79
RBFOX1-219ENST00000569895 PTH2RP49190 550 aa20■□□□□ 0.79
RBFOX1-219ENST00000569895 CLK1P49759 484 aaKnown RBP20■□□□□ 0.79
RBFOX1-219ENST00000569895 NME5P56597 212 aa20■□□□□ 0.79
RBFOX1-219ENST00000569895 UFM1P61960 85 aa20■□□□□ 0.79
RBFOX1-219ENST00000569895 LTBQ06643 244 aa20■□□□□ 0.79
RBFOX1-219ENST00000569895 GNA13Q14344 377 aa20■□□□□ 0.79
RBFOX1-219ENST00000569895 ATG16L1Q676U5 607 aa20■□□□□ 0.79
RBFOX1-219ENST00000569895 ZNF621Q6ZSS3 439 aa20■□□□□ 0.79
RBFOX1-219ENST00000569895 BHLHA15Q7RTS1 189 aaPredicted RBP20■□□□□ 0.79
RBFOX1-219ENST00000569895 GRINAQ7Z429 371 aa20■□□□□ 0.79
RBFOX1-219ENST00000569895 MTDHQ86UE4 582 aaKnown RBP20■□□□□ 0.79
RBFOX1-219ENST00000569895 CMIPQ8IY22 773 aa20■□□□□ 0.79
RBFOX1-219ENST00000569895 ZNF100Q8IYN0 542 aa20■□□□□ 0.79
RBFOX1-219ENST00000569895 GLB1L3Q8NCI6 653 aaPredicted RBP20■□□□□ 0.79
RBFOX1-219ENST00000569895 AKAP1Q92667 903 aaKnown RBP eCLIP20■□□□□ 0.79
RBFOX1-219ENST00000569895 SMR3AQ99954 134 aa20■□□□□ 0.79
RBFOX1-219ENST00000569895 POTEKPQ9BYX7 375 aa20■□□□□ 0.79
RBFOX1-219ENST00000569895 CHRNA9Q9UGM1 479 aa20■□□□□ 0.79
RBFOX1-219ENST00000569895 RNF115Q9Y4L5 304 aa20■□□□□ 0.79
RBFOX1-219ENST00000569895 HMGN4O00479 90 aa19.99■□□□□ 0.79
RBFOX1-219ENST00000569895 SDHDO14521 159 aa19.99■□□□□ 0.79
RBFOX1-219ENST00000569895 FESP07332 822 aa19.99■□□□□ 0.79
RBFOX1-219ENST00000569895 CD3EP07766 207 aa19.99■□□□□ 0.79
RBFOX1-219ENST00000569895 PAX1P15863 534 aa19.99■□□□□ 0.79
RBFOX1-219ENST00000569895 HTR3AP46098 478 aa19.99■□□□□ 0.79
RBFOX1-219ENST00000569895 CHRNEQ04844 493 aa19.99■□□□□ 0.79
RBFOX1-219ENST00000569895 PDK3Q15120 406 aa19.99■□□□□ 0.79
RBFOX1-219ENST00000569895 TSC22D1Q15714 1073 aa19.99■□□□□ 0.79
RBFOX1-219ENST00000569895 TAB1Q15750 504 aa19.99■□□□□ 0.79
RBFOX1-219ENST00000569895 ADAM5Q6NVV9 412 aa19.99■□□□□ 0.79
RBFOX1-219ENST00000569895 RNF130Q86XS8 419 aa19.99■□□□□ 0.79
RBFOX1-219ENST00000569895 PMM1Q92871 262 aa19.99■□□□□ 0.79
RBFOX1-219ENST00000569895 ZG16BQ96DA0 208 aa19.99■□□□□ 0.79
RBFOX1-219ENST00000569895 CCDC106Q9BWC9 280 aa19.99■□□□□ 0.79
RBFOX1-219ENST00000569895 MTHFD2LQ9H903 347 aaPredicted RBP19.99■□□□□ 0.79
RBFOX1-219ENST00000569895 CTPS2Q9NRF8 586 aa19.99■□□□□ 0.79
RBFOX1-219ENST00000569895 ING1Q9UK53 422 aaPredicted RBP19.99■□□□□ 0.79
RBFOX1-219ENST00000569895 HDGFL3Q9Y3E1 203 aa19.99■□□□□ 0.79
RBFOX1-219ENST00000569895 ACANP16112 2415 aa19.99■□□□□ 0.79
RBFOX1-219ENST00000569895 TMEM120BA0PK00 339 aa19.98■□□□□ 0.79
RBFOX1-219ENST00000569895 C9JVG2 144 aa19.98■□□□□ 0.79
RBFOX1-219ENST00000569895 H7C1Q1 480 aa19.98■□□□□ 0.79
RBFOX1-219ENST00000569895 KRT75O95678 551 aa19.98■□□□□ 0.79
RBFOX1-219ENST00000569895 ALDOCP09972 364 aaKnown RBP19.98■□□□□ 0.79
RBFOX1-219ENST00000569895 FUT5Q11128 374 aa19.98■□□□□ 0.79
RBFOX1-219ENST00000569895 NCMAPQ5T1S8 102 aa19.98■□□□□ 0.79
RBFOX1-219ENST00000569895 ZNF775Q96BV0 537 aaPredicted RBP19.98■□□□□ 0.79
RBFOX1-219ENST00000569895 ZBTB9Q96C00 473 aa19.98■□□□□ 0.79
RBFOX1-219ENST00000569895 MUCL1Q96DR8 90 aa19.98■□□□□ 0.79
RBFOX1-219ENST00000569895 COX4I2Q96KJ9 171 aa19.98■□□□□ 0.79
RBFOX1-219ENST00000569895 TEX37Q96LM6 180 aa19.98■□□□□ 0.79
RBFOX1-219ENST00000569895 GPR45Q9Y5Y3 372 aa19.98■□□□□ 0.79
RBFOX1-219ENST00000569895 CLOCKO15516 846 aa19.97■□□□□ 0.79
RBFOX1-219ENST00000569895 DNPH1O43598 174 aa19.97■□□□□ 0.79
RBFOX1-219ENST00000569895 PMS2P2O95744 297 aa19.97■□□□□ 0.79
RBFOX1-219ENST00000569895 HEXAP06865 529 aa19.97■□□□□ 0.79
RBFOX1-219ENST00000569895 UQCRBP14927 111 aa19.97■□□□□ 0.79
RBFOX1-219ENST00000569895 EPHA3P29320 983 aa19.97■□□□□ 0.79
RBFOX1-219ENST00000569895 IDH2P48735 452 aaKnown RBP19.97■□□□□ 0.79
RBFOX1-219ENST00000569895 SLC18A1P54219 525 aa19.97■□□□□ 0.79
RBFOX1-219ENST00000569895 NXNQ6DKJ4 435 aa19.97■□□□□ 0.79
RBFOX1-219ENST00000569895 LRRC74BQ6ZQY2 392 aa19.97■□□□□ 0.79
RBFOX1-219ENST00000569895 Q71RC1 249 aaPredicted RBP19.97■□□□□ 0.79
RBFOX1-219ENST00000569895 P2RY8Q86VZ1 359 aa19.97■□□□□ 0.79
RBFOX1-219ENST00000569895 PIGXQ8TBF5 258 aa19.97■□□□□ 0.79
RBFOX1-219ENST00000569895 RAB3IL1Q8TBN0 382 aa19.97■□□□□ 0.79
RBFOX1-219ENST00000569895 PIWIL2Q8TC59 973 aaKnown RBP19.97■□□□□ 0.79
RBFOX1-219ENST00000569895 IGFBPL1Q8WX77 278 aa19.97■□□□□ 0.79
RBFOX1-219ENST00000569895 ZNF300Q96RE9 604 aaPredicted RBP19.97■□□□□ 0.79
RBFOX1-219ENST00000569895 ZNF701Q9NV72 531 aaPredicted RBP19.97■□□□□ 0.79
RBFOX1-219ENST00000569895 NKIRAS1Q9NYS0 192 aa19.97■□□□□ 0.79
RBFOX1-219ENST00000569895 PRSS50Q9UI38 385 aa19.97■□□□□ 0.79
RBFOX1-219ENST00000569895 GOLGA8QA0A0J9YX86 632 aa19.96■□□□□ 0.79
RBFOX1-219ENST00000569895 GOLGA8OA6NCC3 632 aa19.96■□□□□ 0.79
RBFOX1-219ENST00000569895 AGAP5A6NIR3 686 aa19.96■□□□□ 0.79
RBFOX1-219ENST00000569895 GOLGA8NF8WBI6 632 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms