RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-215	ENST00000568676	OR2T11	Q8NH01	316 aa		13.86	□□□□□ -0.19
HERPUD1-215	ENST00000568676	OR52N5	Q8NH56	324 aa		13.86	□□□□□ -0.19
HERPUD1-215	ENST00000568676	CLHC1	Q8NHS4	586 aa		13.86	□□□□□ -0.19
HERPUD1-215	ENST00000568676	RFWD2	Q8NHY2	731 aa		13.86	□□□□□ -0.19
HERPUD1-215	ENST00000568676	MUS81	Q96NY9	551 aa		13.86	□□□□□ -0.19
HERPUD1-215	ENST00000568676	PRPF18	Q99633	342 aa	Known RBP	13.86	□□□□□ -0.19
HERPUD1-215	ENST00000568676	ANKZF1	Q9H8Y5	726 aa		13.86	□□□□□ -0.19
HERPUD1-215	ENST00000568676	GPATCH2	Q9NW75	528 aa		13.86	□□□□□ -0.19
HERPUD1-215	ENST00000568676	KCNS2	Q9ULS6	477 aa		13.86	□□□□□ -0.19
HERPUD1-215	ENST00000568676	NPIPA5	A0A0B4J1W7	369 aa		13.85	□□□□□ -0.19
HERPUD1-215	ENST00000568676	SERINC4	A6NH21	518 aa		13.85	□□□□□ -0.19
HERPUD1-215	ENST00000568676	NPIPA7	E9PJI5	369 aa		13.85	□□□□□ -0.19
HERPUD1-215	ENST00000568676	HAX1	O00165	279 aa		13.85	□□□□□ -0.19
HERPUD1-215	ENST00000568676	ANKRD28	O15084	1053 aa		13.85	□□□□□ -0.19
HERPUD1-215	ENST00000568676	H6PD	O95479	791 aa		13.85	□□□□□ -0.19
HERPUD1-215	ENST00000568676	FGF4	P08620	206 aa		13.85	□□□□□ -0.19
HERPUD1-215	ENST00000568676	NPIPA8	P0DM63	369 aa		13.85	□□□□□ -0.19
HERPUD1-215	ENST00000568676	PTN	P21246	168 aa		13.85	□□□□□ -0.19
HERPUD1-215	ENST00000568676	APOBEC3A	P31941	199 aa	Predicted RBP	13.85	□□□□□ -0.19
HERPUD1-215	ENST00000568676	APOBEC1	P41238	236 aa	Known RBP	13.85	□□□□□ -0.19
HERPUD1-215	ENST00000568676	CLK1	P49759	484 aa	Known RBP	13.85	□□□□□ -0.19
HERPUD1-215	ENST00000568676	ZNF83	P51522	516 aa		13.85	□□□□□ -0.19
HERPUD1-215	ENST00000568676	SLC16A1	P53985	500 aa		13.85	□□□□□ -0.19
HERPUD1-215	ENST00000568676	SKP2	Q13309	424 aa		13.85	□□□□□ -0.19
HERPUD1-215	ENST00000568676	KANK2	Q63ZY3	851 aa		13.85	□□□□□ -0.19
HERPUD1-215	ENST00000568676	CCDC63	Q8NA47	563 aa		13.85	□□□□□ -0.19
HERPUD1-215	ENST00000568676	NOA1	Q8NC60	698 aa	Known RBP	13.85	□□□□□ -0.19
HERPUD1-215	ENST00000568676	C1orf162	Q8NEQ5	155 aa	Predicted RBP	13.85	□□□□□ -0.19
HERPUD1-215	ENST00000568676	PIGX	Q8TBF5	258 aa		13.85	□□□□□ -0.19
HERPUD1-215	ENST00000568676	PPP3R2	Q96LZ3	170 aa		13.85	□□□□□ -0.19
HERPUD1-215	ENST00000568676	SDF2	Q99470	211 aa		13.85	□□□□□ -0.19
HERPUD1-215	ENST00000568676	C19orf24	Q9BVV8	132 aa		13.85	□□□□□ -0.19
HERPUD1-215	ENST00000568676	TUBB1	Q9H4B7	451 aa		13.85	□□□□□ -0.19
HERPUD1-215	ENST00000568676	MANSC1	Q9H8J5	431 aa		13.85	□□□□□ -0.19
HERPUD1-215	ENST00000568676	MYOZ1	Q9NP98	299 aa	Predicted RBP	13.85	□□□□□ -0.19
HERPUD1-215	ENST00000568676	TBK1	Q9UHD2	729 aa		13.85	□□□□□ -0.19
HERPUD1-215	ENST00000568676	DNAJC15	Q9Y5T4	150 aa		13.85	□□□□□ -0.19
HERPUD1-215	ENST00000568676	PTGDR2	Q9Y5Y4	395 aa		13.85	□□□□□ -0.19
HERPUD1-215	ENST00000568676	FKBP7	Q9Y680	259 aa		13.85	□□□□□ -0.19
HERPUD1-215	ENST00000568676	ZNF716	A6NP11	495 aa		13.84	□□□□□ -0.19
HERPUD1-215	ENST00000568676		C9JVG2	144 aa		13.84	□□□□□ -0.19
HERPUD1-215	ENST00000568676	MRPL33	O75394	65 aa	Known RBP	13.84	□□□□□ -0.19
HERPUD1-215	ENST00000568676	PMS2P2	O95744	297 aa		13.84	□□□□□ -0.19
HERPUD1-215	ENST00000568676	LINC00032	P0C843	101 aa		13.84	□□□□□ -0.19
HERPUD1-215	ENST00000568676	ZNF16	P17020	682 aa	Predicted RBP	13.84	□□□□□ -0.19
HERPUD1-215	ENST00000568676	EDNRA	P25101	427 aa		13.84	□□□□□ -0.19
HERPUD1-215	ENST00000568676	SESN3	P58005	492 aa		13.84	□□□□□ -0.19
HERPUD1-215	ENST00000568676	CHRNE	Q04844	493 aa		13.84	□□□□□ -0.19
HERPUD1-215	ENST00000568676	MERTK	Q12866	999 aa		13.84	□□□□□ -0.19
HERPUD1-215	ENST00000568676	SQLE	Q14534	574 aa		13.84	□□□□□ -0.19
HERPUD1-215	ENST00000568676	ZNF141	Q15928	474 aa		13.84	□□□□□ -0.19
HERPUD1-215	ENST00000568676	GABRA6	Q16445	453 aa		13.84	□□□□□ -0.19
HERPUD1-215	ENST00000568676	NDUFAF6	Q330K2	333 aa		13.84	□□□□□ -0.19
HERPUD1-215	ENST00000568676	GALNTL6	Q49A17	601 aa		13.84	□□□□□ -0.19
HERPUD1-215	ENST00000568676	PDZK1	Q5T2W1	519 aa		13.84	□□□□□ -0.19
HERPUD1-215	ENST00000568676	LIPN	Q5VXI9	398 aa		13.84	□□□□□ -0.19
HERPUD1-215	ENST00000568676	EIF3M	Q7L2H7	374 aa	Known RBP	13.84	□□□□□ -0.19
HERPUD1-215	ENST00000568676	ZNF775	Q96BV0	537 aa	Predicted RBP	13.84	□□□□□ -0.19
HERPUD1-215	ENST00000568676	THUMPD3	Q9BV44	507 aa	Known RBP	13.84	□□□□□ -0.19
HERPUD1-215	ENST00000568676	PPCS	Q9HAB8	311 aa		13.84	□□□□□ -0.19
HERPUD1-215	ENST00000568676	ACER3	Q9NUN7	267 aa		13.84	□□□□□ -0.19
HERPUD1-215	ENST00000568676	PARPBP	Q9NWS1	579 aa		13.84	□□□□□ -0.19
HERPUD1-215	ENST00000568676	DCTN4	Q9UJW0	460 aa		13.84	□□□□□ -0.19
HERPUD1-215	ENST00000568676	AMDHD2	Q9Y303	409 aa		13.84	□□□□□ -0.19
HERPUD1-215	ENST00000568676	HDGFL3	Q9Y3E1	203 aa		13.84	□□□□□ -0.19
HERPUD1-215	ENST00000568676	NBEAL1	Q6ZS30	2694 aa		13.83	□□□□□ -0.2
HERPUD1-215	ENST00000568676		A0A1W2PPM1	405 aa		13.83	□□□□□ -0.2
HERPUD1-215	ENST00000568676		M0R1B8	84 aa		13.83	□□□□□ -0.2
HERPUD1-215	ENST00000568676	STX11	O75558	287 aa		13.83	□□□□□ -0.2
HERPUD1-215	ENST00000568676	CSTA	P01040	98 aa		13.83	□□□□□ -0.2
HERPUD1-215	ENST00000568676	GUSB	P08236	651 aa		13.83	□□□□□ -0.2
HERPUD1-215	ENST00000568676	LAMP1	P11279	417 aa		13.83	□□□□□ -0.2
HERPUD1-215	ENST00000568676	EFNA1	P20827	205 aa	Predicted RBP	13.83	□□□□□ -0.2
HERPUD1-215	ENST00000568676	PAX7	P23759	505 aa		13.83	□□□□□ -0.2
HERPUD1-215	ENST00000568676	MAGEA8	P43361	318 aa		13.83	□□□□□ -0.2
HERPUD1-215	ENST00000568676	PDLIM4	P50479	330 aa		13.83	□□□□□ -0.2
HERPUD1-215	ENST00000568676	TGFBR3	Q03167	851 aa		13.83	□□□□□ -0.2
HERPUD1-215	ENST00000568676	B3GLCT	Q6Y288	498 aa		13.83	□□□□□ -0.2
HERPUD1-215	ENST00000568676	DDIAS	Q8IXT1	998 aa		13.83	□□□□□ -0.2
HERPUD1-215	ENST00000568676	IFT20	Q8IY31	132 aa		13.83	□□□□□ -0.2
HERPUD1-215	ENST00000568676	OR7A2P	Q8NGA2	310 aa		13.83	□□□□□ -0.2
HERPUD1-215	ENST00000568676	ZNF524	Q96C55	264 aa		13.83	□□□□□ -0.2
HERPUD1-215	ENST00000568676	COQ8B	Q96D53	544 aa		13.83	□□□□□ -0.2
HERPUD1-215	ENST00000568676	OR7D2	Q96RA2	312 aa		13.83	□□□□□ -0.2
HERPUD1-215	ENST00000568676	BHLHE41	Q9C0J9	482 aa	Predicted RBP	13.83	□□□□□ -0.2
HERPUD1-215	ENST00000568676	QRSL1	Q9H0R6	528 aa	Known RBP	13.83	□□□□□ -0.2
HERPUD1-215	ENST00000568676	EML4	Q9HC35	981 aa	Known RBP	13.83	□□□□□ -0.2
HERPUD1-215	ENST00000568676	FIS1	Q9Y3D6	152 aa		13.83	□□□□□ -0.2
HERPUD1-215	ENST00000568676	KCNE3	Q9Y6H6	103 aa		13.83	□□□□□ -0.2
HERPUD1-215	ENST00000568676	COPE	O14579	308 aa		13.82	□□□□□ -0.2
HERPUD1-215	ENST00000568676	TRIM13	O60858	407 aa		13.82	□□□□□ -0.2
HERPUD1-215	ENST00000568676	AGR2	O95994	175 aa		13.82	□□□□□ -0.2
HERPUD1-215	ENST00000568676	IGHV3-9	P01782	118 aa		13.82	□□□□□ -0.2
HERPUD1-215	ENST00000568676	TFPI	P10646	304 aa		13.82	□□□□□ -0.2
HERPUD1-215	ENST00000568676	PRPS1L1	P21108	318 aa		13.82	□□□□□ -0.2
HERPUD1-215	ENST00000568676	IGFBP5	P24593	272 aa		13.82	□□□□□ -0.2
HERPUD1-215	ENST00000568676	PHC1	P78364	1004 aa		13.82	□□□□□ -0.2
HERPUD1-215	ENST00000568676	SPOCK1	Q08629	439 aa		13.82	□□□□□ -0.2
HERPUD1-215	ENST00000568676	C17orf53	Q8N3J3	647 aa	Predicted RBP	13.82	□□□□□ -0.2
HERPUD1-215	ENST00000568676	ZNF540	Q8NDQ6	660 aa		13.82	□□□□□ -0.2

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