RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.35■□□□□ 0.21
CMTM3-214ENST00000567572 ARHGAP11AQ6P4F7 1023 aa16.35■□□□□ 0.21
CMTM3-214ENST00000567572 PLET1Q6UQ28 207 aa16.35■□□□□ 0.21
CMTM3-214ENST00000567572 PFN4Q8NHR9 129 aa16.35■□□□□ 0.21
CMTM3-214ENST00000567572 CAPSLQ8WWF8 208 aa16.35■□□□□ 0.21
CMTM3-214ENST00000567572 DCLRE1CQ96SD1 692 aaKnown RBP16.35■□□□□ 0.21
CMTM3-214ENST00000567572 TMEM43Q9BTV4 400 aa16.35■□□□□ 0.21
CMTM3-214ENST00000567572 TRAF4Q9BUZ4 470 aaPredicted RBP16.35■□□□□ 0.21
CMTM3-214ENST00000567572 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.35■□□□□ 0.21
CMTM3-214ENST00000567572 PEX12O00623 359 aa16.34■□□□□ 0.21
CMTM3-214ENST00000567572 SRPX2O60687 465 aaPredicted RBP16.34■□□□□ 0.21
CMTM3-214ENST00000567572 IFNGP01579 166 aa16.34■□□□□ 0.21
CMTM3-214ENST00000567572 COL9A2Q14055 689 aaPredicted RBP16.34■□□□□ 0.21
CMTM3-214ENST00000567572 IL18Q14116 193 aa16.34■□□□□ 0.21
CMTM3-214ENST00000567572 TBRG1Q3YBR2 411 aa16.34■□□□□ 0.21
CMTM3-214ENST00000567572 WDR45BQ5MNZ6 344 aa16.34■□□□□ 0.21
CMTM3-214ENST00000567572 LRRC28Q86X40 367 aaPredicted RBP16.34■□□□□ 0.21
CMTM3-214ENST00000567572 LSMEM1Q8N8F7 131 aa16.34■□□□□ 0.21
CMTM3-214ENST00000567572 SLC37A3Q8NCC5 494 aa16.34■□□□□ 0.21
CMTM3-214ENST00000567572 OR4C6Q8NH72 309 aa16.34■□□□□ 0.21
CMTM3-214ENST00000567572 IFT27Q9BW83 186 aa16.34■□□□□ 0.21
CMTM3-214ENST00000567572 TP63Q9H3D4 680 aaPredicted RBP16.34■□□□□ 0.21
CMTM3-214ENST00000567572 C20orf141Q9NUB4 165 aa16.34■□□□□ 0.21
CMTM3-214ENST00000567572 DDX28Q9NUL7 540 aaKnown RBP16.34■□□□□ 0.21
CMTM3-214ENST00000567572 IL20RAQ9UHF4 553 aa16.34■□□□□ 0.21
CMTM3-214ENST00000567572 FAM183AA6NL82 134 aa16.33■□□□□ 0.21
CMTM3-214ENST00000567572 LRRTM2O43300 516 aa16.33■□□□□ 0.21
CMTM3-214ENST00000567572 LDB3O75112 727 aa16.33■□□□□ 0.21
CMTM3-214ENST00000567572 PTP4A3O75365 173 aa16.33■□□□□ 0.21
CMTM3-214ENST00000567572 GKN3PP0CG01 181 aa16.33■□□□□ 0.21
CMTM3-214ENST00000567572 SLC2A5P22732 501 aa16.33■□□□□ 0.21
CMTM3-214ENST00000567572 APEX1P27695 318 aaKnown RBP16.33■□□□□ 0.21
CMTM3-214ENST00000567572 SLC6A6P31641 620 aa16.33■□□□□ 0.21
CMTM3-214ENST00000567572 GABRA3P34903 492 aa16.33■□□□□ 0.21
CMTM3-214ENST00000567572 KIR2DL3P43628 341 aa16.33■□□□□ 0.21
CMTM3-214ENST00000567572 GABRA4P48169 554 aa16.33■□□□□ 0.21
CMTM3-214ENST00000567572 EPHA4P54764 986 aa16.33■□□□□ 0.21
CMTM3-214ENST00000567572 SKP1P63208 163 aa16.33■□□□□ 0.21
CMTM3-214ENST00000567572 ZNHIT3Q15649 155 aaPredicted RBP16.33■□□□□ 0.21
CMTM3-214ENST00000567572 HACD4Q5VWC8 232 aa16.33■□□□□ 0.21
CMTM3-214ENST00000567572 TIGD3Q6B0B8 471 aa16.33■□□□□ 0.21
CMTM3-214ENST00000567572 MAMSTRQ6ZN01 415 aa16.33■□□□□ 0.21
CMTM3-214ENST00000567572 RTL4Q6ZR62 310 aa16.33■□□□□ 0.21
CMTM3-214ENST00000567572 TEX19Q8NA77 164 aa16.33■□□□□ 0.21
CMTM3-214ENST00000567572 OR5W2Q8NH69 310 aa16.33■□□□□ 0.21
CMTM3-214ENST00000567572 ZNF285Q96NJ3 590 aa16.33■□□□□ 0.21
CMTM3-214ENST00000567572 TEAD3Q99594 435 aa16.33■□□□□ 0.21
CMTM3-214ENST00000567572 TIMP4Q99727 224 aa16.33■□□□□ 0.21
CMTM3-214ENST00000567572 TTYH2Q9BSA4 534 aa16.33■□□□□ 0.21
CMTM3-214ENST00000567572 MMP28Q9H239 520 aa16.33■□□□□ 0.21
CMTM3-214ENST00000567572 KLHL21Q9UJP4 597 aa16.33■□□□□ 0.21
CMTM3-214ENST00000567572 SHISA3A0PJX4 238 aa16.33■□□□□ 0.2
CMTM3-214ENST00000567572 CD8B2A6NJW9 211 aa16.33■□□□□ 0.2
CMTM3-214ENST00000567572 TFECO14948 347 aaPredicted RBP16.33■□□□□ 0.2
CMTM3-214ENST00000567572 RDH16O75452 317 aa16.33■□□□□ 0.2
CMTM3-214ENST00000567572 SBK2P0C263 348 aa16.33■□□□□ 0.2
CMTM3-214ENST00000567572 SAGP10523 405 aaPredicted RBP16.33■□□□□ 0.2
CMTM3-214ENST00000567572 CD8BP10966 210 aa16.33■□□□□ 0.2
CMTM3-214ENST00000567572 PEPDP12955 493 aa16.33■□□□□ 0.2
CMTM3-214ENST00000567572 HK1P19367 917 aa16.33■□□□□ 0.2
CMTM3-214ENST00000567572 NKX2-5P52952 324 aaPredicted RBP16.33■□□□□ 0.2
CMTM3-214ENST00000567572 PSMD4P55036 377 aaKnown RBP16.33■□□□□ 0.2
CMTM3-214ENST00000567572 GFERP55789 205 aa16.33■□□□□ 0.2
CMTM3-214ENST00000567572 CAV3P56539 151 aa16.33■□□□□ 0.2
CMTM3-214ENST00000567572 ID2Q02363 134 aa16.33■□□□□ 0.2
CMTM3-214ENST00000567572 CMIPQ8IY22 773 aa16.33■□□□□ 0.2
CMTM3-214ENST00000567572 TMEM99Q8N816 258 aa16.33■□□□□ 0.2
CMTM3-214ENST00000567572 OR5M3Q8NGP4 307 aa16.33■□□□□ 0.2
CMTM3-214ENST00000567572 OR9A4Q8NGU2 314 aa16.33■□□□□ 0.2
CMTM3-214ENST00000567572 ADAMTS18Q8TE60 1221 aa16.33■□□□□ 0.2
CMTM3-214ENST00000567572 ANKRD9Q96BM1 317 aaPredicted RBP16.33■□□□□ 0.2
CMTM3-214ENST00000567572 RAB33BQ9H082 229 aa16.33■□□□□ 0.2
CMTM3-214ENST00000567572 ISG20L2Q9H9L3 353 aaKnown RBP16.33■□□□□ 0.2
CMTM3-214ENST00000567572 ATP13A2Q9NQ11 1180 aa16.33■□□□□ 0.2
CMTM3-214ENST00000567572 LAMA1P25391 3075 aa16.32■□□□□ 0.2
CMTM3-214ENST00000567572 TLCD2A6NGC4 264 aa16.32■□□□□ 0.2
CMTM3-214ENST00000567572 LYRM1O43325 122 aa16.32■□□□□ 0.2
CMTM3-214ENST00000567572 CBX7O95931 251 aa16.32■□□□□ 0.2
CMTM3-214ENST00000567572 RBMS1P29558 406 aaKnown RBP16.32■□□□□ 0.2
CMTM3-214ENST00000567572 TALDO1P37837 337 aa16.32■□□□□ 0.2
CMTM3-214ENST00000567572 SF3B4Q15427 424 aaKnown RBP eCLIP16.32■□□□□ 0.2
CMTM3-214ENST00000567572 PAMR1Q6UXH9 720 aa16.32■□□□□ 0.2
CMTM3-214ENST00000567572 TRILQ7L0X0 811 aa16.32■□□□□ 0.2
CMTM3-214ENST00000567572 MS4A15Q8N5U1 240 aa16.32■□□□□ 0.2
CMTM3-214ENST00000567572 OR13C2Q8NGS9 318 aa16.32■□□□□ 0.2
CMTM3-214ENST00000567572 PTP4A1Q93096 173 aa16.32■□□□□ 0.2
CMTM3-214ENST00000567572 CHRNA10Q9GZZ6 450 aa16.32■□□□□ 0.2
CMTM3-214ENST00000567572 CYSLTR2Q9NS75 346 aa16.32■□□□□ 0.2
CMTM3-214ENST00000567572 EPHA6Q9UF33 1036 aa16.32■□□□□ 0.2
CMTM3-214ENST00000567572 NOX1Q9Y5S8 564 aa16.32■□□□□ 0.2
CMTM3-214ENST00000567572 USP34Q70CQ2 3546 aa16.32■□□□□ 0.2
CMTM3-214ENST00000567572 THADAQ6YHU6 1953 aa16.32■□□□□ 0.2
CMTM3-214ENST00000567572 FAM47E-STBD1D6RA91 191 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 YES1P07947 543 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 FAM157BP0CG42 384 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 HOXA6P31267 233 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 MRPS15P82914 257 aaKnown RBP16.31■□□□□ 0.2
CMTM3-214ENST00000567572 PLAURQ03405 335 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 FIGNL1Q6PIW4 674 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 THSD4Q6ZMP0 1018 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms