RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 WIPF1O43516 503 aa11.21□□□□□ -0.61
RNF40-208ENST00000565995 ALOX5P09917 674 aa11.21□□□□□ -0.61
RNF40-208ENST00000565995 BMP4P12644 408 aa11.21□□□□□ -0.61
RNF40-208ENST00000565995 GPC1P35052 558 aa11.21□□□□□ -0.61
RNF40-208ENST00000565995 PRKAG1P54619 331 aa11.21□□□□□ -0.61
RNF40-208ENST00000565995 POU6F2P78424 691 aaPredicted RBP11.21□□□□□ -0.61
RNF40-208ENST00000565995 SRSF2Q01130 221 aaKnown RBP11.21□□□□□ -0.61
RNF40-208ENST00000565995 CHRNB3Q05901 458 aa11.21□□□□□ -0.61
RNF40-208ENST00000565995 PDE7AQ13946 482 aa11.21□□□□□ -0.61
RNF40-208ENST00000565995 ZNF385BQ569K4 471 aa11.21□□□□□ -0.61
RNF40-208ENST00000565995 SLC22A25Q6T423 547 aa11.21□□□□□ -0.61
RNF40-208ENST00000565995 DEPDC4Q8N2C3 294 aa11.21□□□□□ -0.61
RNF40-208ENST00000565995 ZNF527Q8NB42 609 aa11.21□□□□□ -0.61
RNF40-208ENST00000565995 CIDECQ96AQ7 238 aaPredicted RBP11.21□□□□□ -0.61
RNF40-208ENST00000565995 MSI2Q96DH6 328 aaKnown RBP11.21□□□□□ -0.61
RNF40-208ENST00000565995 ZNF300Q96RE9 604 aaPredicted RBP11.21□□□□□ -0.61
RNF40-208ENST00000565995 INPP5KQ9BT40 448 aa11.21□□□□□ -0.61
RNF40-208ENST00000565995 PIGUQ9H490 435 aa11.21□□□□□ -0.61
RNF40-208ENST00000565995 REEP4Q9H6H4 257 aa11.21□□□□□ -0.61
RNF40-208ENST00000565995 MID1IP1Q9NPA3 183 aa11.21□□□□□ -0.61
RNF40-208ENST00000565995 FAM53CQ9NYF3 392 aa11.21□□□□□ -0.61
RNF40-208ENST00000565995 PMF1-BGLAPU3KQ54 211 aa11.21□□□□□ -0.61
RNF40-208ENST00000565995 A0A1W2PNR3 127 aa11.2□□□□□ -0.62
RNF40-208ENST00000565995 EIF4E2O60573 245 aaKnown RBP11.2□□□□□ -0.62
RNF40-208ENST00000565995 SERPINE1P05121 402 aa11.2□□□□□ -0.62
RNF40-208ENST00000565995 HNF1AP20823 631 aa11.2□□□□□ -0.62
RNF40-208ENST00000565995 APOBEC3AP31941 199 aaPredicted RBP11.2□□□□□ -0.62
RNF40-208ENST00000565995 MDH1P40925 334 aaKnown RBP11.2□□□□□ -0.62
RNF40-208ENST00000565995 NR4A2P43354 598 aa11.2□□□□□ -0.62
RNF40-208ENST00000565995 SPOCK1Q08629 439 aa11.2□□□□□ -0.62
RNF40-208ENST00000565995 GABRA6Q16445 453 aa11.2□□□□□ -0.62
RNF40-208ENST00000565995 IMPG1Q17R60 797 aa11.2□□□□□ -0.62
RNF40-208ENST00000565995 SWI5Q1ZZU3 235 aa11.2□□□□□ -0.62
RNF40-208ENST00000565995 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.2□□□□□ -0.62
RNF40-208ENST00000565995 CCNJQ5T5M9 372 aa11.2□□□□□ -0.62
RNF40-208ENST00000565995 ATG16L1Q676U5 607 aa11.2□□□□□ -0.62
RNF40-208ENST00000565995 OR7E24Q6IFN5 339 aa11.2□□□□□ -0.62
RNF40-208ENST00000565995 RNF165Q6ZSG1 346 aa11.2□□□□□ -0.62
RNF40-208ENST00000565995 ZNF100Q8IYN0 542 aa11.2□□□□□ -0.62
RNF40-208ENST00000565995 RFLNBQ8N5W9 214 aa11.2□□□□□ -0.62
RNF40-208ENST00000565995 COX18Q8N8Q8 333 aa11.2□□□□□ -0.62
RNF40-208ENST00000565995 TOR1AIP2Q8NFQ8 470 aa11.2□□□□□ -0.62
RNF40-208ENST00000565995 HTRA1Q92743 480 aa11.2□□□□□ -0.62
RNF40-208ENST00000565995 MTERF3Q96E29 417 aa11.2□□□□□ -0.62
RNF40-208ENST00000565995 MAGEB18Q96M61 343 aa11.2□□□□□ -0.62
RNF40-208ENST00000565995 POU2F3Q9UKI9 436 aa11.2□□□□□ -0.62
RNF40-208ENST00000565995 CARD8Q9Y2G2 431 aa11.2□□□□□ -0.62
RNF40-208ENST00000565995 LOC100289279A0A1B0GTE1 492 aa11.19□□□□□ -0.62
RNF40-208ENST00000565995 ZNF716A6NP11 495 aa11.19□□□□□ -0.62
RNF40-208ENST00000565995 TMEM114B3SHH9 223 aa11.19□□□□□ -0.62
RNF40-208ENST00000565995 C9JVG2 144 aa11.19□□□□□ -0.62
RNF40-208ENST00000565995 H3BNH8 94 aa11.19□□□□□ -0.62
RNF40-208ENST00000565995 PDLIM1O00151 329 aa11.19□□□□□ -0.62
RNF40-208ENST00000565995 SEC22BO75396 215 aa11.19□□□□□ -0.62
RNF40-208ENST00000565995 CRCPO75575 148 aa11.19□□□□□ -0.62
RNF40-208ENST00000565995 NUDT14O95848 222 aa11.19□□□□□ -0.62
RNF40-208ENST00000565995 HMGN2P05204 90 aaKnown RBP11.19□□□□□ -0.62
RNF40-208ENST00000565995 SLC7A1P30825 629 aa11.19□□□□□ -0.62
RNF40-208ENST00000565995 PDLIM4P50479 330 aa11.19□□□□□ -0.62
RNF40-208ENST00000565995 ZNF83P51522 516 aa11.19□□□□□ -0.62
RNF40-208ENST00000565995 ATP12AP54707 1039 aa11.19□□□□□ -0.62
RNF40-208ENST00000565995 DNAJB13P59910 316 aa11.19□□□□□ -0.62
RNF40-208ENST00000565995 GNGT1P63211 74 aa11.19□□□□□ -0.62
RNF40-208ENST00000565995 RUNX1T1Q06455 604 aa11.19□□□□□ -0.62
RNF40-208ENST00000565995 STX3Q13277 289 aa11.19□□□□□ -0.62
RNF40-208ENST00000565995 MST1LQ2TV78 715 aa11.19□□□□□ -0.62
RNF40-208ENST00000565995 ABLIM2Q6H8Q1 611 aa11.19□□□□□ -0.62
RNF40-208ENST00000565995 C3orf33Q6P1S2 294 aa11.19□□□□□ -0.62
RNF40-208ENST00000565995 TMPPEQ6ZT21 453 aa11.19□□□□□ -0.62
RNF40-208ENST00000565995 MTDHQ86UE4 582 aaKnown RBP11.19□□□□□ -0.62
RNF40-208ENST00000565995 MEX3DQ86XN8 651 aaKnown RBP11.19□□□□□ -0.62
RNF40-208ENST00000565995 WDR31Q8NA23 367 aa11.19□□□□□ -0.62
RNF40-208ENST00000565995 OR52N5Q8NH56 324 aa11.19□□□□□ -0.62
RNF40-208ENST00000565995 OR5W2Q8NH69 310 aa11.19□□□□□ -0.62
RNF40-208ENST00000565995 PSMA8Q8TAA3 256 aa11.19□□□□□ -0.62
RNF40-208ENST00000565995 CKAP2Q8WWK9 683 aa11.19□□□□□ -0.62
RNF40-208ENST00000565995 CDS1Q92903 461 aa11.19□□□□□ -0.62
RNF40-208ENST00000565995 ZNF775Q96BV0 537 aaPredicted RBP11.19□□□□□ -0.62
RNF40-208ENST00000565995 FAM120BQ96EK7 910 aaKnown RBP11.19□□□□□ -0.62
RNF40-208ENST00000565995 BOD1Q96IK1 185 aa11.19□□□□□ -0.62
RNF40-208ENST00000565995 CCT7Q99832 543 aa11.19□□□□□ -0.62
RNF40-208ENST00000565995 GATA5Q9BWX5 397 aaPredicted RBP11.19□□□□□ -0.62
RNF40-208ENST00000565995 MYOZ1Q9NP98 299 aaPredicted RBP11.19□□□□□ -0.62
RNF40-208ENST00000565995 SIRT3Q9NTG7 399 aaPredicted RBP11.19□□□□□ -0.62
RNF40-208ENST00000565995 TAS2R16Q9NYV7 291 aa11.19□□□□□ -0.62
RNF40-208ENST00000565995 MALT1Q9UDY8 824 aa11.19□□□□□ -0.62
RNF40-208ENST00000565995 LOC390937A0A1W2PQ73 354 aa11.18□□□□□ -0.62
RNF40-208ENST00000565995 ZNF264O43296 627 aa11.18□□□□□ -0.62
RNF40-208ENST00000565995 RAD51DO75771 328 aa11.18□□□□□ -0.62
RNF40-208ENST00000565995 H6PDO95479 791 aa11.18□□□□□ -0.62
RNF40-208ENST00000565995 UROSP10746 265 aa11.18□□□□□ -0.62
RNF40-208ENST00000565995 NTF4P34130 210 aa11.18□□□□□ -0.62
RNF40-208ENST00000565995 DIO1P49895 249 aa11.18□□□□□ -0.62
RNF40-208ENST00000565995 SLC16A1P53985 500 aa11.18□□□□□ -0.62
RNF40-208ENST00000565995 CSNK2A1P68400 391 aaPredicted RBP11.18□□□□□ -0.62
RNF40-208ENST00000565995 BST1Q10588 318 aa11.18□□□□□ -0.62
RNF40-208ENST00000565995 ANKRD26P1Q6NSI1 321 aa11.18□□□□□ -0.62
RNF40-208ENST00000565995 CDC73Q6P1J9 531 aa11.18□□□□□ -0.62
RNF40-208ENST00000565995 FRMD7Q6ZUT3 714 aa11.18□□□□□ -0.62
RNF40-208ENST00000565995 IL17RELQ6ZVW7 336 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms