RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 NR2F1P10589 423 aa12.18□□□□□ -0.46
VPS9D1-204ENST00000565023 TFPIP10646 304 aa12.18□□□□□ -0.46
VPS9D1-204ENST00000565023 CCNA2P20248 432 aa12.18□□□□□ -0.46
VPS9D1-204ENST00000565023 DRD4P21917 467 aa12.18□□□□□ -0.46
VPS9D1-204ENST00000565023 ELK4P28324 431 aa12.18□□□□□ -0.46
VPS9D1-204ENST00000565023 ADH6P28332 368 aa12.18□□□□□ -0.46
VPS9D1-204ENST00000565023 ADSLP30566 484 aaPredicted RBP12.18□□□□□ -0.46
VPS9D1-204ENST00000565023 SESN3P58005 492 aa12.18□□□□□ -0.46
VPS9D1-204ENST00000565023 SELENBP1Q13228 472 aa12.18□□□□□ -0.46
VPS9D1-204ENST00000565023 FGFBP1Q14512 234 aa12.18□□□□□ -0.46
VPS9D1-204ENST00000565023 ZNF239Q16600 458 aaKnown RBP12.18□□□□□ -0.46
VPS9D1-204ENST00000565023 ALKBH2Q6NS38 261 aa12.18□□□□□ -0.46
VPS9D1-204ENST00000565023 MSRB3Q8IXL7 192 aa12.18□□□□□ -0.46
VPS9D1-204ENST00000565023 DPP10Q8N608 796 aa12.18□□□□□ -0.46
VPS9D1-204ENST00000565023 OR6K3Q8NGY3 331 aa12.18□□□□□ -0.46
VPS9D1-204ENST00000565023 MRGPRX4Q96LA9 322 aa12.18□□□□□ -0.46
VPS9D1-204ENST00000565023 OR5B2Q96R09 309 aa12.18□□□□□ -0.46
VPS9D1-204ENST00000565023 SAP130Q9H0E3 1048 aa12.18□□□□□ -0.46
VPS9D1-204ENST00000565023 COQ10BQ9H8M1 238 aa12.18□□□□□ -0.46
VPS9D1-204ENST00000565023 TIGARQ9NQ88 270 aa12.18□□□□□ -0.46
VPS9D1-204ENST00000565023 POLE3Q9NRF9 147 aa12.18□□□□□ -0.46
VPS9D1-204ENST00000565023 ST6GALNAC2Q9UJ37 374 aa12.18□□□□□ -0.46
VPS9D1-204ENST00000565023 LIPT1Q9Y234 373 aa12.18□□□□□ -0.46
VPS9D1-204ENST00000565023 NDUFAF1Q9Y375 327 aa12.18□□□□□ -0.46
VPS9D1-204ENST00000565023 FREM1Q5H8C1 2179 aa12.18□□□□□ -0.46
VPS9D1-204ENST00000565023 C16orf97H3BN30 126 aa12.17□□□□□ -0.46
VPS9D1-204ENST00000565023 CLIC1O00299 241 aa12.17□□□□□ -0.46
VPS9D1-204ENST00000565023 ANGPT2O15123 496 aa12.17□□□□□ -0.46
VPS9D1-204ENST00000565023 SS18L1O75177 396 aaPredicted RBP12.17□□□□□ -0.46
VPS9D1-204ENST00000565023 HRGP04196 525 aa12.17□□□□□ -0.46
VPS9D1-204ENST00000565023 CHRM4P08173 479 aa12.17□□□□□ -0.46
VPS9D1-204ENST00000565023 CD8BP10966 210 aa12.17□□□□□ -0.46
VPS9D1-204ENST00000565023 PGCP20142 388 aa12.17□□□□□ -0.46
VPS9D1-204ENST00000565023 DNASE1P24855 282 aa12.17□□□□□ -0.46
VPS9D1-204ENST00000565023 CCKARP32238 428 aa12.17□□□□□ -0.46
VPS9D1-204ENST00000565023 UGT2B10P36537 528 aa12.17□□□□□ -0.46
VPS9D1-204ENST00000565023 PGM1P36871 562 aa12.17□□□□□ -0.46
VPS9D1-204ENST00000565023 CRATP43155 626 aa12.17□□□□□ -0.46
VPS9D1-204ENST00000565023 GNGT1P63211 74 aa12.17□□□□□ -0.46
VPS9D1-204ENST00000565023 KLF10Q13118 480 aa12.17□□□□□ -0.46
VPS9D1-204ENST00000565023 GUSBP1Q15486 140 aa12.17□□□□□ -0.46
VPS9D1-204ENST00000565023 TMEM201Q5SNT2 666 aa12.17□□□□□ -0.46
VPS9D1-204ENST00000565023 DLEU7Q6UYE1 221 aa12.17□□□□□ -0.46
VPS9D1-204ENST00000565023 FCRLAQ7L513 359 aa12.17□□□□□ -0.46
VPS9D1-204ENST00000565023 SPATA21Q7Z572 469 aa12.17□□□□□ -0.46
VPS9D1-204ENST00000565023 OIT3Q8WWZ8 545 aa12.17□□□□□ -0.46
VPS9D1-204ENST00000565023 CPNE4Q96A23 557 aaPredicted RBP12.17□□□□□ -0.46
VPS9D1-204ENST00000565023 ZNF775Q96BV0 537 aaPredicted RBP12.17□□□□□ -0.46
VPS9D1-204ENST00000565023 PIK3IP1Q96FE7 263 aa12.17□□□□□ -0.46
VPS9D1-204ENST00000565023 TRNT1Q96Q11 434 aaKnown RBP12.17□□□□□ -0.46
VPS9D1-204ENST00000565023 ELAC2Q9BQ52 826 aaKnown RBP12.17□□□□□ -0.46
VPS9D1-204ENST00000565023 NSRP1Q9H0G5 558 aaKnown RBP12.17□□□□□ -0.46
VPS9D1-204ENST00000565023 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.17□□□□□ -0.46
VPS9D1-204ENST00000565023 ELOVL5Q9NYP7 299 aa12.17□□□□□ -0.46
VPS9D1-204ENST00000565023 VAPAQ9P0L0 249 aa12.17□□□□□ -0.46
VPS9D1-204ENST00000565023 LEF1Q9UJU2 399 aaPredicted RBP12.17□□□□□ -0.46
VPS9D1-204ENST00000565023 SLC35A3Q9Y2D2 325 aa12.17□□□□□ -0.46
VPS9D1-204ENST00000565023 TESMINQ9Y4I5 508 aa12.17□□□□□ -0.46
VPS9D1-204ENST00000565023 PRRC2AP48634 2157 aaKnown RBP12.16□□□□□ -0.46
VPS9D1-204ENST00000565023 NIPBLQ6KC79 2804 aaeCLIP12.16□□□□□ -0.46
VPS9D1-204ENST00000565023 SLC22A2O15244 555 aa12.16□□□□□ -0.46
VPS9D1-204ENST00000565023 SNX3O60493 162 aa12.16□□□□□ -0.46
VPS9D1-204ENST00000565023 PABPC4LP0CB38 370 aaKnown RBP12.16□□□□□ -0.46
VPS9D1-204ENST00000565023 BMP2P12643 396 aa12.16□□□□□ -0.46
VPS9D1-204ENST00000565023 ETFAP13804 333 aa12.16□□□□□ -0.46
VPS9D1-204ENST00000565023 KLK2P20151 261 aa12.16□□□□□ -0.46
VPS9D1-204ENST00000565023 ENPP1P22413 925 aa12.16□□□□□ -0.46
VPS9D1-204ENST00000565023 AGTR1P30556 359 aa12.16□□□□□ -0.46
VPS9D1-204ENST00000565023 KCNJ10P78508 379 aa12.16□□□□□ -0.46
VPS9D1-204ENST00000565023 FADDQ13158 208 aa12.16□□□□□ -0.46
VPS9D1-204ENST00000565023 RGNQ15493 299 aa12.16□□□□□ -0.46
VPS9D1-204ENST00000565023 MAPK11Q15759 364 aa12.16□□□□□ -0.46
VPS9D1-204ENST00000565023 GTF2IRD2BQ6EKJ0 949 aa12.16□□□□□ -0.46
VPS9D1-204ENST00000565023 C3orf33Q6P1S2 294 aa12.16□□□□□ -0.46
VPS9D1-204ENST00000565023 PLEKHM3Q6ZWE6 761 aa12.16□□□□□ -0.46
VPS9D1-204ENST00000565023 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.16□□□□□ -0.46
VPS9D1-204ENST00000565023 NUFIP2Q7Z417 695 aaKnown RBP12.16□□□□□ -0.46
VPS9D1-204ENST00000565023 GTF2IRD2Q86UP8 949 aa12.16□□□□□ -0.46
VPS9D1-204ENST00000565023 RETREG3Q86VR2 466 aa12.16□□□□□ -0.46
VPS9D1-204ENST00000565023 TUSC5Q8IXB3 177 aa12.16□□□□□ -0.46
VPS9D1-204ENST00000565023 WDR60Q8WVS4 1066 aa12.16□□□□□ -0.46
VPS9D1-204ENST00000565023 TMEM234Q8WY98 164 aa12.16□□□□□ -0.46
VPS9D1-204ENST00000565023 ST8SIA1Q92185 356 aa12.16□□□□□ -0.46
VPS9D1-204ENST00000565023 CNOT9Q92600 299 aaKnown RBP12.16□□□□□ -0.46
VPS9D1-204ENST00000565023 SLC38A1Q9H2H9 487 aa12.16□□□□□ -0.46
VPS9D1-204ENST00000565023 RAD21L1Q9H4I0 556 aa12.16□□□□□ -0.46
VPS9D1-204ENST00000565023 CTPS2Q9NRF8 586 aa12.16□□□□□ -0.46
VPS9D1-204ENST00000565023 SERINC1Q9NRX5 453 aa12.16□□□□□ -0.46
VPS9D1-204ENST00000565023 THUMPD1Q9NXG2 353 aaKnown RBP12.16□□□□□ -0.46
VPS9D1-204ENST00000565023 ZNF226Q9NYT6 803 aa12.16□□□□□ -0.46
VPS9D1-204ENST00000565023 ABCA2Q9BZC7 2435 aa12.16□□□□□ -0.46
VPS9D1-204ENST00000565023 A0A1W2PPR1 153 aa12.15□□□□□ -0.46
VPS9D1-204ENST00000565023 FBP2O00757 339 aa12.15□□□□□ -0.46
VPS9D1-204ENST00000565023 AP3D1O14617 1153 aa12.15□□□□□ -0.46
VPS9D1-204ENST00000565023 CCDC22O60826 627 aa12.15□□□□□ -0.46
VPS9D1-204ENST00000565023 BCHEP06276 602 aa12.15□□□□□ -0.46
VPS9D1-204ENST00000565023 TFPTP0C1Z6 253 aa12.15□□□□□ -0.46
VPS9D1-204ENST00000565023 IL7RP16871 459 aa12.15□□□□□ -0.46
VPS9D1-204ENST00000565023 PPIBP23284 216 aaKnown RBP12.15□□□□□ -0.46
VPS9D1-204ENST00000565023 IDH2P48735 452 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms