RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 MAGEA2P43356 314 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 ID4P47928 161 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 DHPSP49366 369 aaPredicted RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 GSK3BP49841 420 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 MXD1Q05195 221 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 IQCCQ4KMZ1 466 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 ESCO2Q56NI9 601 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 C6orf132Q5T0Z8 1188 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 MOB1BQ7L9L4 216 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 Q8IYB0 196 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 COX18Q8N8Q8 333 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 ZNF563Q8TA94 476 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 SLC2A12Q8TD20 617 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 ZNF480Q8WV37 535 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 RAB40AQ8WXH6 277 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 HSPBAP1Q96EW2 488 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 FAM129BQ96TA1 746 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 C11orf16Q9NQ32 467 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 ATXN7L1Q9ULK2 861 aaPredicted RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 MOKQ9UQ07 419 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 EXOSC1Q9Y3B2 195 aaKnown RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 TSC22D4Q9Y3Q8 395 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 A0A087WZY1 265 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 IGHV3-20A0A0C4DH32 117 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 ELOVL7A1L3X0 281 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 SMCO3A2RU48 225 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 GABRR3A8MPY1 467 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 F6UZH7 168 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 NUDT21O43809 227 aaKnown RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 SRPX2O60687 465 aaPredicted RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 ANXA2P07355 339 aaKnown RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 DBTP11182 482 aaKnown RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 S1PR1P21453 382 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 CERS1P27544 350 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 CHAF1BQ13112 559 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 C1orf189Q5VU69 101 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 OR52E8Q6IFG1 317 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 SMARCD3Q6STE5 483 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 LYPD4Q6UWN0 246 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 CLDN22Q8N7P3 220 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 GDPD1Q8N9F7 314 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 ZNF671Q8TAW3 534 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 RPL3LQ92901 407 aaKnown RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 ZNF764Q96H86 408 aaPredicted RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 TXNDC17Q9BRA2 123 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 ESRP2Q9H6T0 727 aaKnown RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 C19orf12Q9NSK7 152 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 SNTG1Q9NSN8 517 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 ABCD2Q9UBJ2 740 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 ZNF107Q9UII5 783 aaPredicted RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 DENND4CQ5VZ89 1909 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 J3QW42 95 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 DVL2O14641 736 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 DUX1O43812 170 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 PCDHGA12O60330 932 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 KCNK2O95069 426 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 GOSR1O95249 250 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 IL9P15248 144 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 IFNGR1P15260 489 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 HBA1P69905 142 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 ZNF91Q05481 1191 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 RAB40BQ12829 278 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 FAM185AQ8N0U4 392 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 SLC5A8Q8N695 610 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 SMARCD2Q92925 531 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 ORAI3Q9BRQ5 295 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 AKIRIN1Q9H9L7 192 aaPredicted RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 CPNE5Q9HCH3 593 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 LPAR3Q9UBY5 353 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 N6AMT1Q9Y5N5 214 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 PIAS3Q9Y6X2 628 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 SPAG17Q6Q759 2223 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 VSTM2BA6NLU5 285 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 PCDH7O60245 1069 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 CSTF2P33240 577 aaKnown RBP eCLIP3.13□□□□□ -1.912e-6■□□□□ 10.4
CHD9-213ENST00000564845 RPS27P42677 84 aaKnown RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 OMPP47874 163 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 GBX2P52951 348 aaPredicted RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 ADPRHP54922 357 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 ZNF763Q0D2J5 394 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 SNTB1Q13884 538 aaKnown RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 KEAP1Q14145 624 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 SLBPQ14493 270 aaKnown RBP eCLIP3.13□□□□□ -1.91
CHD9-213ENST00000564845 DUSP7Q16829 419 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 TMEM178AQ8NBL3 297 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 SFXN5Q8TD22 340 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 BIRC7Q96CA5 298 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 PDLIM5Q96HC4 596 aaKnown RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 COL21A1Q96P44 957 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 IL4I1Q96RQ9 567 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 PRRT1Q99946 306 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 B3GNT4Q9C0J1 378 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 A4GALTQ9NPC4 353 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 SIRT5Q9NXA8 310 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 NDOR1Q9UHB4 597 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 KLK4Q9Y5K2 254 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 ARID1BQ8NFD5 2236 aaPredicted RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 ACOT8O14734 319 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 NDUFS4O43181 175 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 MED6O75586 246 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms