RNA–Protein interactions for RNA: ENST00000564317.5

CDH11-209, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-209ENST00000564317 SEPHS2Q99611 448 aa14.01□□□□□ -0.17
CDH11-209ENST00000564317 TMEM185BQ9H7F4 350 aa14.01□□□□□ -0.17
CDH11-209ENST00000564317 TMEM27Q9HBJ8 222 aa14.01□□□□□ -0.17
CDH11-209ENST00000564317 SHANK1Q9Y566 2161 aa14□□□□□ -0.17
CDH11-209ENST00000564317 TMED7-TICAM2A0A0A6YYA0 188 aa14□□□□□ -0.17
CDH11-209ENST00000564317 TMEM72A0PK05 275 aa14□□□□□ -0.17
CDH11-209ENST00000564317 H3BML4 177 aa14□□□□□ -0.17
CDH11-209ENST00000564317 FFAR1O14842 300 aa14□□□□□ -0.17
CDH11-209ENST00000564317 MT-ND1P03886 318 aa14□□□□□ -0.17
CDH11-209ENST00000564317 OPN1LWP04000 364 aa14□□□□□ -0.17
CDH11-209ENST00000564317 PEPDP12955 493 aa14□□□□□ -0.17
CDH11-209ENST00000564317 CCNA2P20248 432 aa14□□□□□ -0.17
CDH11-209ENST00000564317 ELK4P28324 431 aa14□□□□□ -0.17
CDH11-209ENST00000564317 LHX2P50458 406 aa14□□□□□ -0.17
CDH11-209ENST00000564317 POLR2HP52434 150 aaKnown RBP14□□□□□ -0.17
CDH11-209ENST00000564317 CDH12P55289 794 aa14□□□□□ -0.17
CDH11-209ENST00000564317 TLE1Q04724 770 aa14□□□□□ -0.17
CDH11-209ENST00000564317 PIN1Q13526 163 aaPredicted RBP14□□□□□ -0.17
CDH11-209ENST00000564317 VASNQ6EMK4 673 aa14□□□□□ -0.17
CDH11-209ENST00000564317 ARHGAP11AQ6P4F7 1023 aa14□□□□□ -0.17
CDH11-209ENST00000564317 AAGABQ6PD74 315 aa14□□□□□ -0.17
CDH11-209ENST00000564317 ZNF613Q6PF04 617 aa14□□□□□ -0.17
CDH11-209ENST00000564317 ADAMTS16Q8TE57 1224 aa14□□□□□ -0.17
CDH11-209ENST00000564317 CANT1Q8WVQ1 401 aa14□□□□□ -0.17
CDH11-209ENST00000564317 SMPDL3BQ92485 455 aa14□□□□□ -0.17
CDH11-209ENST00000564317 ABTB1Q969K4 478 aaPredicted RBP14□□□□□ -0.17
CDH11-209ENST00000564317 MIB2Q96AX9 1013 aa14□□□□□ -0.17
CDH11-209ENST00000564317 PRRC1Q96M27 445 aa14□□□□□ -0.17
CDH11-209ENST00000564317 NDUFAF4Q9P032 175 aa14□□□□□ -0.17
CDH11-209ENST00000564317 RPS6KB2Q9UBS0 482 aa14□□□□□ -0.17
CDH11-209ENST00000564317 A4GNTQ9UNA3 340 aa14□□□□□ -0.17
CDH11-209ENST00000564317 TMED7Q9Y3B3 224 aa14□□□□□ -0.17
CDH11-209ENST00000564317 ENPP4Q9Y6X5 453 aa14□□□□□ -0.17
CDH11-209ENST00000564317 MED12Q93074 2177 aa14□□□□□ -0.17
CDH11-209ENST00000564317 FAM208BQ5VWN6 2430 aa13.99□□□□□ -0.17
CDH11-209ENST00000564317 DHRS12A0PJE2 317 aa13.99□□□□□ -0.17
CDH11-209ENST00000564317 TRAPPC13A5PLN9 417 aa13.99□□□□□ -0.17
CDH11-209ENST00000564317 EIF4E1BA6NMX2 242 aaKnown RBP13.99□□□□□ -0.17
CDH11-209ENST00000564317 NPIPA2E9PIF3 369 aa13.99□□□□□ -0.17
CDH11-209ENST00000564317 NPIPA3F8WFD2 350 aa13.99□□□□□ -0.17
CDH11-209ENST00000564317 H0YC42 278 aa13.99□□□□□ -0.17
CDH11-209ENST00000564317 DIRAS1O95057 198 aa13.99□□□□□ -0.17
CDH11-209ENST00000564317 PRSS23O95084 383 aa13.99□□□□□ -0.17
CDH11-209ENST00000564317 ACTL6AO96019 429 aa13.99□□□□□ -0.17
CDH11-209ENST00000564317 POU3F2P20265 443 aaPredicted RBP13.99□□□□□ -0.17
CDH11-209ENST00000564317 GCKP35557 465 aa13.99□□□□□ -0.17
CDH11-209ENST00000564317 APOBEC1P41238 236 aaKnown RBP13.99□□□□□ -0.17
CDH11-209ENST00000564317 HTR3AP46098 478 aa13.99□□□□□ -0.17
CDH11-209ENST00000564317 TPD52P55327 224 aaPredicted RBP13.99□□□□□ -0.17
CDH11-209ENST00000564317 CLDN15P56746 228 aa13.99□□□□□ -0.17
CDH11-209ENST00000564317 CLDN18P56856 261 aa13.99□□□□□ -0.17
CDH11-209ENST00000564317 CLDN20P56880 219 aa13.99□□□□□ -0.17
CDH11-209ENST00000564317 SELENBP1Q13228 472 aa13.99□□□□□ -0.17
CDH11-209ENST00000564317 ALG10BQ5I7T1 473 aa13.99□□□□□ -0.17
CDH11-209ENST00000564317 WDR88Q6ZMY6 472 aa13.99□□□□□ -0.17
CDH11-209ENST00000564317 GDF7Q7Z4P5 450 aa13.99□□□□□ -0.17
CDH11-209ENST00000564317 GGNQ86UU5 652 aa13.99□□□□□ -0.17
CDH11-209ENST00000564317 ST6GALNAC3Q8NDV1 305 aa13.99□□□□□ -0.17
CDH11-209ENST00000564317 ATP6V1C2Q8NEY4 427 aa13.99□□□□□ -0.17
CDH11-209ENST00000564317 SLC41A3Q96GZ6 507 aa13.99□□□□□ -0.17
CDH11-209ENST00000564317 RAB3IPQ96QF0 476 aaPredicted RBP13.99□□□□□ -0.17
CDH11-209ENST00000564317 ZNF300Q96RE9 604 aaPredicted RBP13.99□□□□□ -0.17
CDH11-209ENST00000564317 TIMP4Q99727 224 aa13.99□□□□□ -0.17
CDH11-209ENST00000564317 MAGIXQ9H6Y5 334 aa13.99□□□□□ -0.17
CDH11-209ENST00000564317 RHCGQ9UBD6 479 aa13.99□□□□□ -0.17
CDH11-209ENST00000564317 CHRNA9Q9UGM1 479 aa13.99□□□□□ -0.17
CDH11-209ENST00000564317 PRDM4Q9UKN5 801 aa13.99□□□□□ -0.17
CDH11-209ENST00000564317 ZNF407Q9C0G0 2248 aa13.99□□□□□ -0.17
CDH11-209ENST00000564317 FREM3P0C091 2139 aa13.99□□□□□ -0.17
CDH11-209ENST00000564317 CHD6Q8TD26 2715 aa13.99□□□□□ -0.17
CDH11-209ENST00000564317 IGKV1D-42A0A075B6H8 117 aa13.98□□□□□ -0.17
CDH11-209ENST00000564317 LINC01387J3KSC0 135 aa13.98□□□□□ -0.17
CDH11-209ENST00000564317 OR5F1O95221 314 aa13.98□□□□□ -0.17
CDH11-209ENST00000564317 FABP3P05413 133 aa13.98□□□□□ -0.17
CDH11-209ENST00000564317 ZNF708P17019 499 aa13.98□□□□□ -0.17
CDH11-209ENST00000564317 PTNP21246 168 aa13.98□□□□□ -0.17
CDH11-209ENST00000564317 PTGS2P35354 604 aa13.98□□□□□ -0.17
CDH11-209ENST00000564317 MAGEA2P43356 314 aa13.98□□□□□ -0.17
CDH11-209ENST00000564317 SUCLG1P53597 346 aaKnown RBP13.98□□□□□ -0.17
CDH11-209ENST00000564317 TAS2R41P59536 307 aa13.98□□□□□ -0.17
CDH11-209ENST00000564317 RAC1P63000 192 aa13.98□□□□□ -0.17
CDH11-209ENST00000564317 C19orf57Q0VDD7 668 aa13.98□□□□□ -0.17
CDH11-209ENST00000564317 KPNB1Q14974 876 aaKnown RBP13.98□□□□□ -0.17
CDH11-209ENST00000564317 IGFBP7Q16270 282 aa13.98□□□□□ -0.17
CDH11-209ENST00000564317 ULK3Q6PHR2 472 aa13.98□□□□□ -0.17
CDH11-209ENST00000564317 ZDHHC21Q8IVQ6 265 aa13.98□□□□□ -0.17
CDH11-209ENST00000564317 DNAJA4Q8WW22 397 aaPredicted RBP13.98□□□□□ -0.17
CDH11-209ENST00000564317 SLCO4A1Q96BD0 722 aa13.98□□□□□ -0.17
CDH11-209ENST00000564317 SARAFQ96BY9 339 aa13.98□□□□□ -0.17
CDH11-209ENST00000564317 WDYHV1Q96HA8 205 aa13.98□□□□□ -0.17
CDH11-209ENST00000564317 PRSS27Q9BQR3 290 aa13.98□□□□□ -0.17
CDH11-209ENST00000564317 OR11A1Q9GZK7 315 aa13.98□□□□□ -0.17
CDH11-209ENST00000564317 POLR2J2Q9GZM3 115 aaKnown RBP13.98□□□□□ -0.17
CDH11-209ENST00000564317 POLR2J3Q9H1A7 115 aaKnown RBP13.98□□□□□ -0.17
CDH11-209ENST00000564317 C12orf10Q9HB07 376 aa13.98□□□□□ -0.17
CDH11-209ENST00000564317 IL1RAPQ9NPH3 570 aa13.98□□□□□ -0.17
CDH11-209ENST00000564317 MAN2C1Q9NTJ4 1040 aa13.98□□□□□ -0.17
CDH11-209ENST00000564317 RIMS3Q9UJD0 308 aa13.98□□□□□ -0.17
CDH11-209ENST00000564317 ACAD8Q9UKU7 415 aa13.98□□□□□ -0.17
CDH11-209ENST00000564317 SLC7A7Q9UM01 511 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms