RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 PIGXQ8TBF5 258 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 TFAP2CQ92754 450 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 TMEM41AQ96HV5 264 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 FAM46AQ96IP4 442 aaKnown RBP9.24□□□□□ -0.93
SMG1-208ENST00000563448 HS6ST2Q96MM7 605 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 CCDC86Q9H6F5 360 aaKnown RBP9.24□□□□□ -0.93
SMG1-208ENST00000563448 C12orf10Q9HB07 376 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 MEPEQ9NQ76 525 aaPredicted RBP9.24□□□□□ -0.93
SMG1-208ENST00000563448 PAPOLBQ9NRJ5 636 aaKnown RBP9.24□□□□□ -0.93
SMG1-208ENST00000563448 DEPPQ9NTK1 212 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 C20orf141Q9NUB4 165 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 SELENONQ9NZV5 590 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 ORC6Q9Y5N6 252 aa9.24□□□□□ -0.93
SMG1-208ENST00000563448 IGKV1D-42A0A075B6H8 117 aa9.23□□□□□ -0.93
SMG1-208ENST00000563448 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.23□□□□□ -0.93
SMG1-208ENST00000563448 CDK2AP1O14519 115 aa9.23□□□□□ -0.93
SMG1-208ENST00000563448 KLF4O43474 513 aa9.23□□□□□ -0.93
SMG1-208ENST00000563448 TRIM3O75382 744 aaPredicted RBP9.23□□□□□ -0.93
SMG1-208ENST00000563448 SNX4O95219 450 aa9.23□□□□□ -0.93
SMG1-208ENST00000563448 TP53P04637 393 aaPredicted RBP9.23□□□□□ -0.93
SMG1-208ENST00000563448 ACADSP16219 412 aa9.23□□□□□ -0.93
SMG1-208ENST00000563448 PRKCAP17252 672 aa9.23□□□□□ -0.93
SMG1-208ENST00000563448 RBM34P42696 430 aaKnown RBP9.23□□□□□ -0.93
SMG1-208ENST00000563448 GSSP48637 474 aa9.23□□□□□ -0.93
SMG1-208ENST00000563448 DLX5P56178 289 aa9.23□□□□□ -0.93
SMG1-208ENST00000563448 PRKCDQ05655 676 aa9.23□□□□□ -0.93
SMG1-208ENST00000563448 OR1C1Q15619 314 aa9.23□□□□□ -0.93
SMG1-208ENST00000563448 PLCZ1Q86YW0 608 aa9.23□□□□□ -0.93
SMG1-208ENST00000563448 P3H2Q8IVL5 708 aa9.23□□□□□ -0.93
SMG1-208ENST00000563448 SPACA3Q8IXA5 215 aa9.23□□□□□ -0.93
SMG1-208ENST00000563448 DHRSXQ8N5I4 330 aa9.23□□□□□ -0.93
SMG1-208ENST00000563448 GNPDA2Q8TDQ7 276 aa9.23□□□□□ -0.93
SMG1-208ENST00000563448 GATA6Q92908 595 aa9.23□□□□□ -0.93
SMG1-208ENST00000563448 ZNF556Q9HAH1 456 aa9.23□□□□□ -0.93
SMG1-208ENST00000563448 TIMMDC1Q9NPL8 285 aa9.23□□□□□ -0.93
SMG1-208ENST00000563448 FAM118AQ9NWS6 357 aa9.23□□□□□ -0.93
SMG1-208ENST00000563448 REV1Q9UBZ9 1251 aa9.23□□□□□ -0.93
SMG1-208ENST00000563448 OSGIN1Q9UJX0 560 aa9.23□□□□□ -0.93
SMG1-208ENST00000563448 VDAC3Q9Y277 283 aa9.23□□□□□ -0.93
SMG1-208ENST00000563448 MED31Q9Y3C7 131 aa9.23□□□□□ -0.93
SMG1-208ENST00000563448 ELOA3DA6NLF2 546 aaPredicted RBP9.22□□□□□ -0.93
SMG1-208ENST00000563448 E9PQ18 207 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 ETV2O00321 342 aaPredicted RBP9.22□□□□□ -0.93
SMG1-208ENST00000563448 KPNA4O00629 521 aaPredicted RBP9.22□□□□□ -0.93
SMG1-208ENST00000563448 DENRO43583 198 aaKnown RBP9.22□□□□□ -0.93
SMG1-208ENST00000563448 CEACAM4O75871 244 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 PNMTP11086 282 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 IFI30P13284 250 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 MAKP20794 623 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 CNR1P21554 472 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 EPHA2P29317 976 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 IFNGR2P38484 337 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 GPR4P46093 362 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 CTBP2P56545 445 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 NPRL3Q12980 569 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 ELOA3BQ3SY89 546 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 CCDC81Q6ZN84 652 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 GRINAQ7Z429 371 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 ADGRG3Q86Y34 549 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 MDS2Q8NDY4 140 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 ELOA3Q8NG57 546 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 OR4K17Q8NGC6 315 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 OR1J4Q8NGS1 313 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 POC1BQ8TC44 478 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 CYGBQ8WWM9 190 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 TMEM234Q8WY98 164 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 ST8SIA1Q92185 356 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 C1GALT1C1Q96EU7 318 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 GABARAPL3Q9BY60 117 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 HES7Q9BYE0 225 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 UCK2Q9BZX2 261 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 GRIP2Q9C0E4 1043 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 RIBC2Q9H4K1 309 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 HHATLQ9HCP6 504 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 MED17Q9NVC6 651 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 TUBA8Q9NY65 449 aaPredicted RBP9.22□□□□□ -0.93
SMG1-208ENST00000563448 ASPMQ8IZT6 3477 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 URB1O60287 2271 aaKnown RBP9.22□□□□□ -0.93
SMG1-208ENST00000563448 MED12Q93074 2177 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 TMEM72A0PK05 275 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 PINLYPA6NC86 204 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 OR5H15A6NDH6 313 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 SHISA8B8ZZ34 492 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 H0YAE9 185 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 SLC25A12O75746 678 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 IGFBP1P08833 259 aaPredicted RBP9.22□□□□□ -0.93
SMG1-208ENST00000563448 CCNA2P20248 432 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 CAPGP40121 348 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 MASP1P48740 699 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 POLR2HP52434 150 aaKnown RBP9.22□□□□□ -0.93
SMG1-208ENST00000563448 GPR85P60893 370 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 EGR4Q05215 589 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 TSPAN31Q12999 210 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 PLPPR5Q32ZL2 321 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 SLC25A53Q5H9E4 307 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 TIGD3Q6B0B8 471 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 POMZP3Q6PJE2 187 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 IGFL2Q6UWQ7 119 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 CD300LDQ6UXZ3 194 aa9.22□□□□□ -0.93
SMG1-208ENST00000563448 CHERPQ8IWX8 916 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms