RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 SYNPO2LQ9H987 977 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 MED31Q9Y3C7 131 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 SCN3AQ9NY46 2000 aa12.93□□□□□ -0.34
VPS9D1-202ENST00000561976 TRAV1-2A0A0B4J238 106 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 A0A1W2PPL8 197 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 C1QTNF3-AMACRE9PGA6 284 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 SCAMP1O15126 338 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 VEGFCP49767 419 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 ERVFC1P60507 584 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 ACTC1P68032 377 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 ACTA1P68133 377 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 DUSP8Q13202 625 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 BAIAP2L2Q6UXY1 529 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 KANSL1Q7Z3B3 1105 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 SLC51BQ86UW2 128 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 RFLNBQ8N5W9 214 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 GRHL3Q8TE85 626 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 SMIM4Q8WVI0 70 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 MBNL1Q9NR56 388 aaKnown RBP12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 LYARQ9NX58 379 aaKnown RBP12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 SPHK1Q9NYA1 384 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 HCN3Q9P1Z3 774 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 USP36Q9P275 1121 aaKnown RBP12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 SIGLEC7Q9Y286 467 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 SLC27A6Q9Y2P4 619 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 GMDSO60547 372 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 CEBPBP17676 345 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 ATF4P18848 351 aaPredicted RBP12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 NDUFS1P28331 727 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 CEBPEQ15744 281 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 GARNL3Q5VVW2 1013 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 Q6ZTK2 550 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 CMIPQ8IY22 773 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 ARL14Q8N4G2 192 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 SUSD6Q92537 303 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 RBPMSQ93062 196 aaKnown RBP12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 OR14A2Q96R54 314 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 RAB11FIP5Q9BXF6 653 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 ADAP2Q9NPF8 381 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 DEC1Q9P2X7 70 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 ST6GALNAC2Q9UJ37 374 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 PLEKHM1Q9Y4G2 1056 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 HYAL3O43820 417 aaPredicted RBP12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 TFP02787 698 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 ALDOBP05062 364 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 NT5EP21589 574 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 GBX2P52951 348 aaPredicted RBP12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 TCTE1Q5JU00 501 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 CMTM4Q8IZR5 234 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 ZMYND19Q96E35 227 aaPredicted RBP12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 FKBP7Q9Y680 259 aa12.92□□□□□ -0.34
VPS9D1-202ENST00000561976 MYO7AQ13402 2215 aa12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 TBC1D3EA0A087X179 549 aa12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 PEX12O00623 359 aa12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 TSPAN4O14817 238 aa12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 KHNYNO15037 678 aaKnown RBP12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 GSTZ1O43708 216 aaPredicted RBP12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 CMPK1P30085 196 aa12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 SIM1P81133 766 aaPredicted RBP12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 OPCMLQ14982 345 aa12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 AMZ1Q400G9 498 aa12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 UBE2NLQ5JXB2 153 aa12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 SLC25A25Q6KCM7 469 aa12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 UBE2Q1Q7Z7E8 422 aa12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 HDDC3Q8N4P3 179 aa12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 OR51L1Q8NGJ5 315 aa12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 DERL3Q96Q80 235 aa12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 C12orf10Q9HB07 376 aa12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 MGAT4CQ9UBM8 478 aa12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 TRBV2A0A0J9YWF9 115 aa12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 KHDRBS3O75525 346 aaKnown RBP12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 DBIP07108 87 aaKnown RBP12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 THBS1P07996 1170 aa12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 ADRB1P08588 477 aa12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 ZNF888P0CJ79 500 aaPredicted RBP12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 PSMB1P20618 241 aaKnown RBP12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 NAA10P41227 235 aaPredicted RBP12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 CCR9P51686 369 aa12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 ID2Q02363 134 aa12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 FAM69AQ5T7M9 428 aa12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 HES5Q5TA89 166 aa12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 TMPRSS11FQ6ZWK6 438 aa12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 ANKRD33Q7Z3H0 272 aa12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 SERPINA12Q8IW75 414 aa12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 ZNF619Q8N2I2 560 aa12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 MFSD9Q8NBP5 474 aa12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 OR11G2Q8NGC1 345 aa12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 OR4K14Q8NGD5 310 aa12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 SNX33Q8WV41 574 aa12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 HRASLSQ9HDD0 168 aa12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 FBXO34Q9NWN3 711 aa12.91□□□□□ -0.34
VPS9D1-202ENST00000561976 TRPM6Q9BX84 2022 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 MDC1Q14676 2089 aaKnown RBP12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 ARPC1BO15143 372 aaKnown RBP12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 MID1O15344 667 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 C4BPBP20851 252 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 SLC2A5P22732 501 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 EDNRAP25101 427 aa12.9□□□□□ -0.34
VPS9D1-202ENST00000561976 VIPR2P41587 438 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms