RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 UBTD1Q9HAC8 227 aa22.49■■□□□ 1.19
NME3-202ENST00000561637 KLHL13Q9P2N7 655 aa22.49■■□□□ 1.19
NME3-202ENST00000561637 STAB1Q9NY15 2570 aa22.49■■□□□ 1.19
NME3-202ENST00000561637 SMPD2O60906 423 aa22.48■■□□□ 1.19
NME3-202ENST00000561637 SLC7A1P30825 629 aa22.48■■□□□ 1.19
NME3-202ENST00000561637 RYKP34925 604 aa22.48■■□□□ 1.19
NME3-202ENST00000561637 MERTKQ12866 999 aa22.48■■□□□ 1.19
NME3-202ENST00000561637 ZNF621Q6ZSS3 439 aa22.48■■□□□ 1.19
NME3-202ENST00000561637 PLEKHM3Q6ZWE6 761 aa22.48■■□□□ 1.19
NME3-202ENST00000561637 ZC3HAV1Q7Z2W4 902 aaKnown RBP22.48■■□□□ 1.19
NME3-202ENST00000561637 CNOT9Q92600 299 aaKnown RBP22.48■■□□□ 1.19
NME3-202ENST00000561637 ZNF775Q96BV0 537 aaPredicted RBP22.48■■□□□ 1.19
NME3-202ENST00000561637 OR5B2Q96R09 309 aa22.48■■□□□ 1.19
NME3-202ENST00000561637 PANX1Q96RD7 426 aa22.48■■□□□ 1.19
NME3-202ENST00000561637 GLRX2Q9NS18 164 aa22.48■■□□□ 1.19
NME3-202ENST00000561637 NKIRAS1Q9NYS0 192 aa22.48■■□□□ 1.19
NME3-202ENST00000561637 CHD3Q12873 2000 aaKnown RBP22.48■■□□□ 1.19
NME3-202ENST00000561637 TRPC5OSA6NMA1 111 aa22.47■■□□□ 1.19
NME3-202ENST00000561637 AP3D1O14617 1153 aa22.47■■□□□ 1.19
NME3-202ENST00000561637 SMAD9O15198 467 aaKnown RBP22.47■■□□□ 1.19
NME3-202ENST00000561637 KLF4O43474 513 aa22.47■■□□□ 1.19
NME3-202ENST00000561637 MAPK11Q15759 364 aa22.47■■□□□ 1.19
NME3-202ENST00000561637 GTDC1Q4AE62 458 aa22.47■■□□□ 1.19
NME3-202ENST00000561637 ALKBH2Q6NS38 261 aa22.47■■□□□ 1.19
NME3-202ENST00000561637 WFDC8Q8IUA0 241 aa22.47■■□□□ 1.19
NME3-202ENST00000561637 OR9I1Q8NGQ6 314 aa22.47■■□□□ 1.19
NME3-202ENST00000561637 MAELQ96JY0 434 aaKnown RBP22.47■■□□□ 1.19
NME3-202ENST00000561637 ACTR6Q9GZN1 396 aa22.47■■□□□ 1.19
NME3-202ENST00000561637 SLC38A1Q9H2H9 487 aa22.47■■□□□ 1.19
NME3-202ENST00000561637 ACER3Q9NUN7 267 aa22.47■■□□□ 1.19
NME3-202ENST00000561637 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP22.46■■□□□ 1.19
NME3-202ENST00000561637 GJE1A6NN92 205 aa22.46■■□□□ 1.19
NME3-202ENST00000561637 GCM2O75603 506 aaPredicted RBP22.46■■□□□ 1.19
NME3-202ENST00000561637 AGR2O95994 175 aa22.46■■□□□ 1.19
NME3-202ENST00000561637 PLAUP00749 431 aa22.46■■□□□ 1.19
NME3-202ENST00000561637 SLC18A1P54219 525 aa22.46■■□□□ 1.19
NME3-202ENST00000561637 PPP2R2BQ00005 443 aa22.46■■□□□ 1.19
NME3-202ENST00000561637 ATG16L1Q676U5 607 aa22.46■■□□□ 1.19
NME3-202ENST00000561637 YTHDF3Q7Z739 585 aaKnown RBP22.46■■□□□ 1.19
NME3-202ENST00000561637 ST8SIA1Q92185 356 aa22.46■■□□□ 1.19
NME3-202ENST00000561637 REXO5Q96IC2 774 aaKnown RBP22.46■■□□□ 1.19
NME3-202ENST00000561637 ZNF300Q96RE9 604 aaPredicted RBP22.46■■□□□ 1.19
NME3-202ENST00000561637 PIP5K1AQ99755 562 aa22.46■■□□□ 1.19
NME3-202ENST00000561637 BDH2Q9BUT1 245 aa22.46■■□□□ 1.19
NME3-202ENST00000561637 TIGARQ9NQ88 270 aa22.46■■□□□ 1.19
NME3-202ENST00000561637 CTPS2Q9NRF8 586 aa22.46■■□□□ 1.19
NME3-202ENST00000561637 RAI1Q7Z5J4 1906 aaPredicted RBP22.45■■□□□ 1.18
NME3-202ENST00000561637 PGCP20142 388 aa22.45■■□□□ 1.18
NME3-202ENST00000561637 RNPS1Q15287 305 aaKnown RBP22.45■■□□□ 1.18
NME3-202ENST00000561637 PDCD4Q53EL6 469 aaKnown RBP22.45■■□□□ 1.18
NME3-202ENST00000561637 TMEM201Q5SNT2 666 aa22.45■■□□□ 1.18
NME3-202ENST00000561637 C3orf33Q6P1S2 294 aa22.45■■□□□ 1.18
NME3-202ENST00000561637 BEND4Q6ZU67 534 aa22.45■■□□□ 1.18
NME3-202ENST00000561637 GABRG1Q8N1C3 465 aa22.45■■□□□ 1.18
NME3-202ENST00000561637 ZNF75CPQ92670 426 aaPredicted RBP22.45■■□□□ 1.18
NME3-202ENST00000561637 ZBTB18Q99592 522 aa22.45■■□□□ 1.18
NME3-202ENST00000561637 PSD2Q9BQI7 771 aa22.45■■□□□ 1.18
NME3-202ENST00000561637 CCDC106Q9BWC9 280 aa22.45■■□□□ 1.18
NME3-202ENST00000561637 POLE3Q9NRF9 147 aa22.45■■□□□ 1.18
NME3-202ENST00000561637 USF3Q68DE3 2245 aa22.45■■□□□ 1.18
NME3-202ENST00000561637 ZNF814B7Z6K7 855 aa22.44■■□□□ 1.18
NME3-202ENST00000561637 ERLIN1O75477 346 aa22.44■■□□□ 1.18
NME3-202ENST00000561637 PRKD3O94806 890 aa22.44■■□□□ 1.18
NME3-202ENST00000561637 FESP07332 822 aa22.44■■□□□ 1.18
NME3-202ENST00000561637 GUSBP08236 651 aa22.44■■□□□ 1.18
NME3-202ENST00000561637 CCNA2P20248 432 aa22.44■■□□□ 1.18
NME3-202ENST00000561637 MVDP53602 400 aa22.44■■□□□ 1.18
NME3-202ENST00000561637 RAC3P60763 192 aa22.44■■□□□ 1.18
NME3-202ENST00000561637 KCNJ10P78508 379 aa22.44■■□□□ 1.18
NME3-202ENST00000561637 AP1ARQ63HQ0 302 aa22.44■■□□□ 1.18
NME3-202ENST00000561637 GTF2IRD2BQ6EKJ0 949 aa22.44■■□□□ 1.18
NME3-202ENST00000561637 PRSS57Q6UWY2 283 aa22.44■■□□□ 1.18
NME3-202ENST00000561637 ATG4DQ86TL0 474 aaPredicted RBP22.44■■□□□ 1.18
NME3-202ENST00000561637 GTF2IRD2Q86UP8 949 aa22.44■■□□□ 1.18
NME3-202ENST00000561637 RAB3IL1Q8TBN0 382 aa22.44■■□□□ 1.18
NME3-202ENST00000561637 S100PBPQ96BU1 408 aa22.44■■□□□ 1.18
NME3-202ENST00000561637 AURKBQ96GD4 344 aaPredicted RBP22.44■■□□□ 1.18
NME3-202ENST00000561637 OR11A1Q9GZK7 315 aa22.44■■□□□ 1.18
NME3-202ENST00000561637 MXRA5Q9NR99 2828 aa22.44■■□□□ 1.18
NME3-202ENST00000561637 PRSS50Q9UI38 385 aa22.44■■□□□ 1.18
NME3-202ENST00000561637 SLC35A3Q9Y2D2 325 aa22.44■■□□□ 1.18
NME3-202ENST00000561637 CADP27708 2225 aa22.43■■□□□ 1.18
NME3-202ENST00000561637 SLC22A3O75751 556 aa22.43■■□□□ 1.18
NME3-202ENST00000561637 YES1P07947 543 aa22.43■■□□□ 1.18
NME3-202ENST00000561637 PABPC4LP0CB38 370 aaKnown RBP22.43■■□□□ 1.18
NME3-202ENST00000561637 PSMB1P20618 241 aaKnown RBP22.43■■□□□ 1.18
NME3-202ENST00000561637 DIO1P49895 249 aa22.43■■□□□ 1.18
NME3-202ENST00000561637 HPCAP84074 193 aa22.43■■□□□ 1.18
NME3-202ENST00000561637 SYT14P1Q58G82 188 aa22.43■■□□□ 1.18
NME3-202ENST00000561637 STK32CQ86UX6 486 aa22.43■■□□□ 1.18
NME3-202ENST00000561637 ZNF563Q8TA94 476 aa22.43■■□□□ 1.18
NME3-202ENST00000561637 PIGTQ969N2 578 aa22.43■■□□□ 1.18
NME3-202ENST00000561637 PERPQ96FX8 193 aa22.43■■□□□ 1.18
NME3-202ENST00000561637 ARL5BQ96KC2 179 aa22.43■■□□□ 1.18
NME3-202ENST00000561637 TRNT1Q96Q11 434 aaKnown RBP22.43■■□□□ 1.18
NME3-202ENST00000561637 ST6GALNAC1Q9NSC7 600 aaPredicted RBP22.43■■□□□ 1.18
NME3-202ENST00000561637 RFXANKO14593 260 aa22.42■■□□□ 1.18
NME3-202ENST00000561637 TFPIP10646 304 aa22.42■■□□□ 1.18
NME3-202ENST00000561637 IDO1P14902 403 aa22.42■■□□□ 1.18
NME3-202ENST00000561637 ACKR1Q16570 336 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms