RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 HSH2DQ96JZ2 352 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 LRGUKQ96M69 825 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 TRIM2Q9C040 744 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 AMBRA1Q9C0C7 1298 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 TMEM27Q9HBJ8 222 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 CTPS2Q9NRF8 586 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 SERINC1Q9NRX5 453 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 STOML1Q9UBI4 398 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 RPS6KB2Q9UBS0 482 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 TESQ9UGI8 421 aaKnown RBP9.28□□□□□ -0.92
LRRC28-221ENST00000561276 OSGIN1Q9UJX0 560 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 ZNF835Q9Y2P0 537 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 AP4B1Q9Y6B7 739 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 V9GYQ6 96 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 ZNF407Q9C0G0 2248 aa9.28□□□□□ -0.92
LRRC28-221ENST00000561276 ARHGAP21Q5T5U3 1957 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 TMED7-TICAM2A0A0A6YYA0 188 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 TCRBV5S2A0A599 114 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 CPSF4LA6NMK7 179 aaKnown RBP9.27□□□□□ -0.93
LRRC28-221ENST00000561276 KALRNO60229 2985 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 FMO6PO60774 539 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 SEMA7AO75326 666 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 IFNW1P05000 195 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 TPOP07202 933 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 CPN1P15169 458 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 POLR2HP52434 150 aaKnown RBP9.27□□□□□ -0.93
LRRC28-221ENST00000561276 SUCLG1P53597 346 aaKnown RBP9.27□□□□□ -0.93
LRRC28-221ENST00000561276 CLDN20P56880 219 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 RAC1P63000 192 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 KCNC4Q03721 635 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 SRYQ05066 204 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 MRPL49Q13405 166 aaKnown RBP9.27□□□□□ -0.93
LRRC28-221ENST00000561276 FLOT2Q14254 428 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 BCL2A1Q16548 175 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 MTX3Q5HYI7 312 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 EMC4Q5J8M3 183 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 WLSQ5T9L3 541 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 ULK3Q6PHR2 472 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 THSD4Q6ZMP0 1018 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 DEF8Q6ZN54 512 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 UBQLNLQ8IYU4 475 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 GALNT11Q8NCW6 608 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 OR5M9Q8NGP3 310 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 FAM57AQ8TBR7 257 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 ADAMTS16Q8TE57 1224 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 DNAJA4Q8WW22 397 aaPredicted RBP9.27□□□□□ -0.93
LRRC28-221ENST00000561276 GEMIN6Q8WXD5 167 aaKnown RBP9.27□□□□□ -0.93
LRRC28-221ENST00000561276 SMPDL3BQ92485 455 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 SLC38A4Q969I6 547 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 RELTQ969Z4 430 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 WDYHV1Q96HA8 205 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 SEPHS2Q99611 448 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 PNPLA3Q9NST1 481 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 ALKBH4Q9NXW9 302 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 CAMK2AQ9UQM7 478 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 TMED7Q9Y3B3 224 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 ATRXP46100 2492 aa9.27□□□□□ -0.93
LRRC28-221ENST00000561276 PRRC2CQ9Y520 2896 aaKnown RBP9.26□□□□□ -0.93
LRRC28-221ENST00000561276 KIAA1549Q9HCM3 1950 aa9.26□□□□□ -0.93
LRRC28-221ENST00000561276 BSNQ9UPA5 3926 aa9.26□□□□□ -0.93
LRRC28-221ENST00000561276 A0A1B0GWA3 101 aa9.26□□□□□ -0.93
LRRC28-221ENST00000561276 H0YC42 278 aa9.26□□□□□ -0.93
LRRC28-221ENST00000561276 PRRG2O14669 202 aa9.26□□□□□ -0.93
LRRC28-221ENST00000561276 BCKDKO14874 412 aa9.26□□□□□ -0.93
LRRC28-221ENST00000561276 SLC19A2O60779 497 aa9.26□□□□□ -0.93
LRRC28-221ENST00000561276 ZNF708P17019 499 aa9.26□□□□□ -0.93
LRRC28-221ENST00000561276 POU3F2P20265 443 aaPredicted RBP9.26□□□□□ -0.93
LRRC28-221ENST00000561276 FKBP2P26885 142 aaKnown RBP9.26□□□□□ -0.93
LRRC28-221ENST00000561276 ELK4P28324 431 aa9.26□□□□□ -0.93
LRRC28-221ENST00000561276 SFTPDP35247 375 aa9.26□□□□□ -0.93
LRRC28-221ENST00000561276 YAP1P46937 504 aaKnown RBP9.26□□□□□ -0.93
LRRC28-221ENST00000561276 CDH12P55289 794 aa9.26□□□□□ -0.93
LRRC28-221ENST00000561276 TPD52P55327 224 aaPredicted RBP9.26□□□□□ -0.93
LRRC28-221ENST00000561276 CLDN15P56746 228 aa9.26□□□□□ -0.93
LRRC28-221ENST00000561276 CLDN18P56856 261 aa9.26□□□□□ -0.93
LRRC28-221ENST00000561276 FOXD4Q12950 439 aaPredicted RBP9.26□□□□□ -0.93
LRRC28-221ENST00000561276 SELENBP1Q13228 472 aa9.26□□□□□ -0.93
LRRC28-221ENST00000561276 PIN1Q13526 163 aaPredicted RBP9.26□□□□□ -0.93
LRRC28-221ENST00000561276 C3AR1Q16581 482 aa9.26□□□□□ -0.93
LRRC28-221ENST00000561276 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.26□□□□□ -0.93
LRRC28-221ENST00000561276 EIF2S3LQ2VIR3 472 aaKnown RBP9.26□□□□□ -0.93
LRRC28-221ENST00000561276 TMEM176BQ3YBM2 270 aaPredicted RBP9.26□□□□□ -0.93
LRRC28-221ENST00000561276 ALG10BQ5I7T1 473 aa9.26□□□□□ -0.93
LRRC28-221ENST00000561276 ZNF613Q6PF04 617 aa9.26□□□□□ -0.93
LRRC28-221ENST00000561276 Q6ZPB1 254 aaPredicted RBP9.26□□□□□ -0.93
LRRC28-221ENST00000561276 TSEN54Q7Z6J9 526 aaKnown RBP9.26□□□□□ -0.93
LRRC28-221ENST00000561276 ATG4DQ86TL0 474 aaPredicted RBP9.26□□□□□ -0.93
LRRC28-221ENST00000561276 GGNQ86UU5 652 aa9.26□□□□□ -0.93
LRRC28-221ENST00000561276 TSPYL5Q86VY4 417 aaPredicted RBP9.26□□□□□ -0.93
LRRC28-221ENST00000561276 ATCAYQ86WG3 371 aa9.26□□□□□ -0.93
LRRC28-221ENST00000561276 LSRQ86X29 649 aaPredicted RBP9.26□□□□□ -0.93
LRRC28-221ENST00000561276 DOLPP1Q86YN1 238 aa9.26□□□□□ -0.93
LRRC28-221ENST00000561276 PRR7Q8TB68 274 aa9.26□□□□□ -0.93
LRRC28-221ENST00000561276 RNF217Q8TC41 542 aa9.26□□□□□ -0.93
LRRC28-221ENST00000561276 PHF10Q8WUB8 498 aaKnown RBP9.26□□□□□ -0.93
LRRC28-221ENST00000561276 UTP4Q969X6 686 aaKnown RBP9.26□□□□□ -0.93
LRRC28-221ENST00000561276 C3orf49Q96BT1 292 aa9.26□□□□□ -0.93
LRRC28-221ENST00000561276 SLC47A1Q96FL8 570 aa9.26□□□□□ -0.93
LRRC28-221ENST00000561276 C7orf34Q96L11 122 aa9.26□□□□□ -0.93
LRRC28-221ENST00000561276 PRDM14Q9GZV8 571 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms