RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 NR1H2P55055 460 aa9.71□□□□□ -0.86
CRTC3-209ENST00000560320 SUMO3P55854 103 aaPredicted RBP9.71□□□□□ -0.86
CRTC3-209ENST00000560320 CTBP2P56545 445 aa9.71□□□□□ -0.86
CRTC3-209ENST00000560320 TUBA4AP68366 448 aa9.71□□□□□ -0.86
CRTC3-209ENST00000560320 PLAURQ03405 335 aa9.71□□□□□ -0.86
CRTC3-209ENST00000560320 ZNF117Q03924 483 aa9.71□□□□□ -0.86
CRTC3-209ENST00000560320 GINS1Q14691 196 aa9.71□□□□□ -0.86
CRTC3-209ENST00000560320 NTRK2Q16620 822 aa9.71□□□□□ -0.86
CRTC3-209ENST00000560320 BROXQ5VW32 411 aa9.71□□□□□ -0.86
CRTC3-209ENST00000560320 SLC27A4Q6P1M0 643 aa9.71□□□□□ -0.86
CRTC3-209ENST00000560320 APOOLQ6UXV4 268 aa9.71□□□□□ -0.86
CRTC3-209ENST00000560320 C16orf47Q6ZP98 133 aaPredicted RBP9.71□□□□□ -0.86
CRTC3-209ENST00000560320 RPS19BP1Q86WX3 136 aaKnown RBP9.71□□□□□ -0.86
CRTC3-209ENST00000560320 TMEM156Q8N614 296 aa9.71□□□□□ -0.86
CRTC3-209ENST00000560320 CLDN22Q8N7P3 220 aa9.71□□□□□ -0.86
CRTC3-209ENST00000560320 BPIFB6Q8NFQ5 453 aa9.71□□□□□ -0.86
CRTC3-209ENST00000560320 CNIH3Q8TBE1 160 aa9.71□□□□□ -0.86
CRTC3-209ENST00000560320 FBLIM1Q8WUP2 373 aa9.71□□□□□ -0.86
CRTC3-209ENST00000560320 TRUB1Q8WWH5 349 aaKnown RBP9.71□□□□□ -0.86
CRTC3-209ENST00000560320 HGDQ93099 445 aa9.71□□□□□ -0.86
CRTC3-209ENST00000560320 ZNF566Q969W8 418 aa9.71□□□□□ -0.86
CRTC3-209ENST00000560320 BPIFA2Q96DR5 249 aa9.71□□□□□ -0.86
CRTC3-209ENST00000560320 SPACA9Q96E40 222 aaPredicted RBP9.71□□□□□ -0.86
CRTC3-209ENST00000560320 SGTBQ96EQ0 304 aa9.71□□□□□ -0.86
CRTC3-209ENST00000560320 RASL10BQ96S79 203 aa9.71□□□□□ -0.86
CRTC3-209ENST00000560320 MESP1Q9BRJ9 268 aa9.71□□□□□ -0.86
CRTC3-209ENST00000560320 SLC19A3Q9BZV2 496 aa9.71□□□□□ -0.86
CRTC3-209ENST00000560320 CDCP1Q9H5V8 836 aa9.71□□□□□ -0.86
CRTC3-209ENST00000560320 SLC25A19Q9HC21 320 aa9.71□□□□□ -0.86
CRTC3-209ENST00000560320 CCNB1IP1Q9NPC3 277 aa9.71□□□□□ -0.86
CRTC3-209ENST00000560320 RASSF1Q9NS23 344 aa9.71□□□□□ -0.86
CRTC3-209ENST00000560320 P4HTMQ9NXG6 502 aa9.71□□□□□ -0.86
CRTC3-209ENST00000560320 PPP4R1LQ9P1A2 415 aa9.71□□□□□ -0.86
CRTC3-209ENST00000560320 FBXL4Q9UKA2 621 aa9.71□□□□□ -0.86
CRTC3-209ENST00000560320 PCDHGB6Q9Y5F9 930 aa9.71□□□□□ -0.86
CRTC3-209ENST00000560320 CDH10Q9Y6N8 788 aa9.71□□□□□ -0.86
CRTC3-209ENST00000560320 EML6Q6ZMW3 1958 aa9.71□□□□□ -0.86
CRTC3-209ENST00000560320 PCNX3Q9H6A9 2034 aa9.71□□□□□ -0.86
CRTC3-209ENST00000560320 A0A087WUJ7 227 aa9.7□□□□□ -0.86
CRTC3-209ENST00000560320 ANKUB1A6NFN9 424 aa9.7□□□□□ -0.86
CRTC3-209ENST00000560320 TMEM200CA6NKL6 621 aa9.7□□□□□ -0.86
CRTC3-209ENST00000560320 SNTNA6NMZ2 147 aa9.7□□□□□ -0.86
CRTC3-209ENST00000560320 E9PQ18 207 aa9.7□□□□□ -0.86
CRTC3-209ENST00000560320 CDC40O60508 579 aaKnown RBP eCLIP9.7□□□□□ -0.86
CRTC3-209ENST00000560320 ITGA10O75578 1167 aa9.7□□□□□ -0.86
CRTC3-209ENST00000560320 HMGN1P05114 100 aa9.7□□□□□ -0.86
CRTC3-209ENST00000560320 SPINK2P20155 84 aa9.7□□□□□ -0.86
CRTC3-209ENST00000560320 FMO3P31513 532 aa9.7□□□□□ -0.86
CRTC3-209ENST00000560320 SLC1A3P43003 542 aa9.7□□□□□ -0.86
CRTC3-209ENST00000560320 HTR3AP46098 478 aa9.7□□□□□ -0.86
CRTC3-209ENST00000560320 RPL5P46777 297 aaKnown RBP9.7□□□□□ -0.86
CRTC3-209ENST00000560320 CRYZQ08257 329 aaKnown RBP9.7□□□□□ -0.86
CRTC3-209ENST00000560320 CTU2Q2VPK5 515 aaKnown RBP9.7□□□□□ -0.86
CRTC3-209ENST00000560320 C12orf73Q69YU5 71 aa9.7□□□□□ -0.86
CRTC3-209ENST00000560320 ZNF773Q6PK81 442 aa9.7□□□□□ -0.86
CRTC3-209ENST00000560320 WDR88Q6ZMY6 472 aa9.7□□□□□ -0.86
CRTC3-209ENST00000560320 Q6ZPB1 254 aaPredicted RBP9.7□□□□□ -0.86
CRTC3-209ENST00000560320 TMPRSS11FQ6ZWK6 438 aa9.7□□□□□ -0.86
CRTC3-209ENST00000560320 ENTHD1Q8IYW4 607 aa9.7□□□□□ -0.86
CRTC3-209ENST00000560320 SLC43A2Q8N370 569 aa9.7□□□□□ -0.86
CRTC3-209ENST00000560320 PFN4Q8NHR9 129 aa9.7□□□□□ -0.86
CRTC3-209ENST00000560320 FANK1Q8TC84 345 aa9.7□□□□□ -0.86
CRTC3-209ENST00000560320 DUSP19Q8WTR2 217 aa9.7□□□□□ -0.86
CRTC3-209ENST00000560320 IPCEF1Q8WWN9 437 aaPredicted RBP9.7□□□□□ -0.86
CRTC3-209ENST00000560320 C3orf49Q96BT1 292 aa9.7□□□□□ -0.86
CRTC3-209ENST00000560320 NODALQ96S42 347 aa9.7□□□□□ -0.86
CRTC3-209ENST00000560320 SECISBP2Q96T21 854 aaKnown RBP9.7□□□□□ -0.86
CRTC3-209ENST00000560320 TMEM43Q9BTV4 400 aa9.7□□□□□ -0.86
CRTC3-209ENST00000560320 TSSK6Q9BXA6 273 aa9.7□□□□□ -0.86
CRTC3-209ENST00000560320 DPH1Q9BZG8 443 aa9.7□□□□□ -0.86
CRTC3-209ENST00000560320 GPN2Q9H9Y4 310 aaPredicted RBP9.7□□□□□ -0.86
CRTC3-209ENST00000560320 WDR70Q9NW82 654 aa9.7□□□□□ -0.86
CRTC3-209ENST00000560320 HPF1Q9NWY4 346 aa9.7□□□□□ -0.86
CRTC3-209ENST00000560320 TAS2R10Q9NYW0 307 aa9.7□□□□□ -0.86
CRTC3-209ENST00000560320 NDUFA13Q9P0J0 144 aa9.7□□□□□ -0.86
CRTC3-209ENST00000560320 ABI3Q9P2A4 366 aa9.7□□□□□ -0.86
CRTC3-209ENST00000560320 RNF6Q9Y252 685 aa9.7□□□□□ -0.86
CRTC3-209ENST00000560320 LOC101059948A0A1B0GTJ6 334 aa9.69□□□□□ -0.86
CRTC3-209ENST00000560320 SH3D21A4FU49 640 aa9.69□□□□□ -0.86
CRTC3-209ENST00000560320 ENO4A6NNW6 628 aa9.69□□□□□ -0.86
CRTC3-209ENST00000560320 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.69□□□□□ -0.86
CRTC3-209ENST00000560320 M0R3G1 203 aa9.69□□□□□ -0.86
CRTC3-209ENST00000560320 GNB5O14775 395 aa9.69□□□□□ -0.86
CRTC3-209ENST00000560320 OIP5O43482 229 aa9.69□□□□□ -0.86
CRTC3-209ENST00000560320 GMFGO60234 142 aa9.69□□□□□ -0.86
CRTC3-209ENST00000560320 MRPS14O60783 128 aaKnown RBP9.69□□□□□ -0.86
CRTC3-209ENST00000560320 SERPINA7P05543 415 aa9.69□□□□□ -0.86
CRTC3-209ENST00000560320 SMIM18P0DKX4 95 aa9.69□□□□□ -0.86
CRTC3-209ENST00000560320 PTNP21246 168 aa9.69□□□□□ -0.86
CRTC3-209ENST00000560320 CRHBPP24387 322 aa9.69□□□□□ -0.86
CRTC3-209ENST00000560320 SOX3P41225 446 aa9.69□□□□□ -0.86
CRTC3-209ENST00000560320 GIPRP48546 466 aa9.69□□□□□ -0.86
CRTC3-209ENST00000560320 SLC9A3P48764 834 aa9.69□□□□□ -0.86
CRTC3-209ENST00000560320 ZNF41P51814 821 aaPredicted RBP9.69□□□□□ -0.86
CRTC3-209ENST00000560320 POLR2HP52434 150 aaKnown RBP9.69□□□□□ -0.86
CRTC3-209ENST00000560320 MLF1P58340 268 aa9.69□□□□□ -0.86
CRTC3-209ENST00000560320 SNRPGP62308 76 aaKnown RBP9.69□□□□□ -0.86
CRTC3-209ENST00000560320 CDK5Q00535 292 aa9.69□□□□□ -0.86
CRTC3-209ENST00000560320 CHAF1BQ13112 559 aa9.69□□□□□ -0.86
CRTC3-209ENST00000560320 SNTA1Q13424 505 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms