RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 PDLIM1O00151 329 aa11.16□□□□□ -0.62
RABGGTA-213ENST00000560127 TMPRSS2O15393 492 aa11.16□□□□□ -0.62
RABGGTA-213ENST00000560127 PLIN3O60664 434 aa11.16□□□□□ -0.62
RABGGTA-213ENST00000560127 HMOX2P30519 316 aa11.16□□□□□ -0.62
RABGGTA-213ENST00000560127 SERPINF1P36955 418 aa11.16□□□□□ -0.62
RABGGTA-213ENST00000560127 SUMO3P55854 103 aaPredicted RBP11.16□□□□□ -0.62
RABGGTA-213ENST00000560127 HILS1P60008 231 aa11.16□□□□□ -0.62
RABGGTA-213ENST00000560127 TRIP10Q15642 601 aa11.16□□□□□ -0.62
RABGGTA-213ENST00000560127 NDUFAF6Q330K2 333 aa11.16□□□□□ -0.62
RABGGTA-213ENST00000560127 AWAT1Q58HT5 328 aa11.16□□□□□ -0.62
RABGGTA-213ENST00000560127 SLC25A53Q5H9E4 307 aa11.16□□□□□ -0.62
RABGGTA-213ENST00000560127 ZNF678Q5SXM1 525 aa11.16□□□□□ -0.62
RABGGTA-213ENST00000560127 MTERF4Q7Z6M4 381 aaKnown RBP11.16□□□□□ -0.62
RABGGTA-213ENST00000560127 NUP43Q8NFH3 380 aa11.16□□□□□ -0.62
RABGGTA-213ENST00000560127 OR52E4Q8NGH9 312 aa11.16□□□□□ -0.62
RABGGTA-213ENST00000560127 CEP70Q8NHQ1 597 aa11.16□□□□□ -0.62
RABGGTA-213ENST00000560127 METTL6Q8TCB7 284 aa11.16□□□□□ -0.62
RABGGTA-213ENST00000560127 ZNF418Q8TF45 676 aaPredicted RBP11.16□□□□□ -0.62
RABGGTA-213ENST00000560127 ZBTB9Q96C00 473 aa11.16□□□□□ -0.62
RABGGTA-213ENST00000560127 C16orf58Q96GQ5 468 aa11.16□□□□□ -0.62
RABGGTA-213ENST00000560127 OR5B2Q96R09 309 aa11.16□□□□□ -0.62
RABGGTA-213ENST00000560127 ZNF382Q96SR6 550 aa11.16□□□□□ -0.62
RABGGTA-213ENST00000560127 TMEM109Q9BVC6 243 aa11.16□□□□□ -0.62
RABGGTA-213ENST00000560127 GSTO2Q9H4Y5 243 aa11.16□□□□□ -0.62
RABGGTA-213ENST00000560127 PPCSQ9HAB8 311 aa11.16□□□□□ -0.62
RABGGTA-213ENST00000560127 SLC17A5Q9NRA2 495 aa11.16□□□□□ -0.62
RABGGTA-213ENST00000560127 EMC3Q9P0I2 261 aa11.16□□□□□ -0.62
RABGGTA-213ENST00000560127 NOSIPQ9Y314 301 aaKnown RBP11.16□□□□□ -0.62
RABGGTA-213ENST00000560127 ETV2O00321 342 aaPredicted RBP11.15□□□□□ -0.62
RABGGTA-213ENST00000560127 GSTA1P08263 222 aa11.15□□□□□ -0.62
RABGGTA-213ENST00000560127 PGCP20142 388 aa11.15□□□□□ -0.62
RABGGTA-213ENST00000560127 PCMT1P22061 227 aa11.15□□□□□ -0.62
RABGGTA-213ENST00000560127 ATP5F1P24539 256 aaPredicted RBP11.15□□□□□ -0.62
RABGGTA-213ENST00000560127 GPC1P35052 558 aa11.15□□□□□ -0.62
RABGGTA-213ENST00000560127 SERPINB4P48594 390 aa11.15□□□□□ -0.62
RABGGTA-213ENST00000560127 DIO1P49895 249 aa11.15□□□□□ -0.62
RABGGTA-213ENST00000560127 PDK3Q15120 406 aa11.15□□□□□ -0.62
RABGGTA-213ENST00000560127 KLHL26Q53HC5 615 aa11.15□□□□□ -0.62
RABGGTA-213ENST00000560127 EXOSC6Q5RKV6 272 aaKnown RBP11.15□□□□□ -0.62
RABGGTA-213ENST00000560127 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.15□□□□□ -0.62
RABGGTA-213ENST00000560127 C9orf135Q5VTT2 229 aa11.15□□□□□ -0.62
RABGGTA-213ENST00000560127 ZYG11AQ6WRX3 759 aa11.15□□□□□ -0.62
RABGGTA-213ENST00000560127 GPRIN3Q6ZVF9 776 aa11.15□□□□□ -0.62
RABGGTA-213ENST00000560127 LCA5Q86VQ0 697 aa11.15□□□□□ -0.62
RABGGTA-213ENST00000560127 COX18Q8N8Q8 333 aa11.15□□□□□ -0.62
RABGGTA-213ENST00000560127 ZNF527Q8NB42 609 aa11.15□□□□□ -0.62
RABGGTA-213ENST00000560127 TOR1AIP2Q8NFQ8 470 aa11.15□□□□□ -0.62
RABGGTA-213ENST00000560127 CIDECQ96AQ7 238 aaPredicted RBP11.15□□□□□ -0.62
RABGGTA-213ENST00000560127 RBM4Q9BWF3 364 aaKnown RBP11.15□□□□□ -0.62
RABGGTA-213ENST00000560127 PLK3Q9H4B4 646 aa11.15□□□□□ -0.62
RABGGTA-213ENST00000560127 TNFRSF12AQ9NP84 129 aa11.15□□□□□ -0.62
RABGGTA-213ENST00000560127 MKS1Q9NXB0 559 aa11.15□□□□□ -0.62
RABGGTA-213ENST00000560127 PCDHB10Q9UN67 800 aa11.15□□□□□ -0.62
RABGGTA-213ENST00000560127 AMDHD2Q9Y303 409 aa11.15□□□□□ -0.62
RABGGTA-213ENST00000560127 TIMM22Q9Y584 194 aa11.15□□□□□ -0.62
RABGGTA-213ENST00000560127 TLDC2A0PJX2 215 aa11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 B9A039 149 aa11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 TRIM77I1YAP6 450 aa11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 GLRA3O75311 464 aa11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 SUPT7LO94864 414 aa11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 SNUPNO95149 360 aaKnown RBP11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 ALOX5P09917 674 aa11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 DAOP14920 347 aa11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 KRT4P19013 534 aa11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 CRHR1P34998 444 aa11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 PPOXP50336 477 aa11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 IDH3GP51553 393 aaPredicted RBP11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 ARFIP2P53365 341 aa11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 PRKAA2P54646 552 aa11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 CCNIQ14094 377 aa11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 PCLAFQ15004 111 aa11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 QPRTQ15274 297 aa11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 ADIPOQQ15848 244 aa11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 TNFAIP8L3Q5GJ75 292 aa11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 SPDYAQ5MJ70 313 aa11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 C3orf33Q6P1S2 294 aa11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 LRIG3Q6UXM1 1119 aa11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 TMPPEQ6ZT21 453 aa11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 USP43Q70EL4 1123 aa11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 SZRD1Q7Z422 152 aa11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 SPATA19Q7Z5L4 167 aa11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 MTDHQ86UE4 582 aaKnown RBP11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 RIBC1Q8N443 379 aaPredicted RBP11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 C17orf78Q8N4C9 275 aa11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 L3HYPDHQ96EM0 354 aa11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 MS4A4EQ96PG1 132 aa11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 KCNA7Q96RP8 456 aa11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 BTBD2Q9BX70 525 aa11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 QRSL1Q9H0R6 528 aaKnown RBP11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 CA10Q9NS85 328 aa11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 GIN1Q9NXP7 522 aa11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 WBP11Q9Y2W2 641 aaKnown RBP11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 POLR3HQ9Y535 204 aaPredicted RBP11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 PCDHGB1Q9Y5G3 927 aa11.14□□□□□ -0.63
RABGGTA-213ENST00000560127 SERTM1A2A2V5 107 aa11.13□□□□□ -0.63
RABGGTA-213ENST00000560127 B4DSR2 109 aa11.13□□□□□ -0.63
RABGGTA-213ENST00000560127 SULT2B1O00204 365 aa11.13□□□□□ -0.63
RABGGTA-213ENST00000560127 PDPK1O15530 556 aa11.13□□□□□ -0.63
RABGGTA-213ENST00000560127 MRPL33O75394 65 aaKnown RBP11.13□□□□□ -0.63
RABGGTA-213ENST00000560127 HSPA4LO95757 839 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms