RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 ENPP5Q9UJA9 477 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 YJEFN3A6XGL0 299 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 FOXD2O60548 495 aaPredicted RBP13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 JUPP14923 745 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 NME2P22392 152 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 GGT5P36269 586 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 NSDHLQ15738 373 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 STK11Q15831 433 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 AAK1Q2M2I8 961 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 ATRNL1Q5VV63 1379 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 LOC102723971A0A1B0GUV8 181 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 TMEM82A0PJX8 343 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 MS4A13Q5J8X5 152 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 ETFRF1Q6IPR1 90 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 ADAM29Q9UKF5 820 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 MADDQ8WXG6 1647 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 F3P13726 295 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 SLC35G3Q8N808 338 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 ZNF454Q8N9F8 522 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 PIGCQ92535 297 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 MCRIP1C9JLW8 97 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 ZNF701M0R085 212 aaPredicted RBP13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 LMO2P25791 158 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 RBPJQ06330 500 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 GPM6BQ13491 265 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 PPP1R3AQ16821 1122 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 TP53I3Q53FA7 332 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 ZNF684Q5T5D7 378 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 SLC6A19Q695T7 634 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 Q6ZRG5 221 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 RAB7BQ96AH8 199 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 METTL9Q9H1A3 318 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 SLC25A18Q9H1K4 315 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 PCDHAC2Q9Y5I4 1007 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 H7BYZ3 331 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 ZNF728P0DKX0 622 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 NTF3P20783 257 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 PIN1Q13526 163 aaPredicted RBP13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 FCRLBQ6BAA4 426 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 ADAMTS14Q8WXS8 1223 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 CALCRP30988 508 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 MEF2AQ02078 507 aaPredicted RBP13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 CEBPEQ15744 281 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 C3orf38Q5JPI3 329 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 C6orf136Q5SQH8 315 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 TREML2Q5T2D2 321 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 HSD17B14Q9BPX1 270 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 ARHGAP39Q9C0H5 1083 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 THSD1Q9NS62 852 aa13.04□□□□□ -0.32
CSPG4P12-202ENST00000559989 GSTP1P09211 210 aaKnown RBP13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 SSTR4P31391 388 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 XCR1P46094 333 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 KIAA0141Q14154 515 aaPredicted RBP13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 ADAMTS16Q8TE57 1224 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 PURBQ96QR8 312 aaKnown RBP13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 SLC22A7Q9Y694 548 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 TCRBV7S3A2A0A539 114 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 SFTPDP35247 375 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 TPMTP51580 245 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 NOGQ13253 232 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 TATDN3Q17R31 274 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 LARP4Q71RC2 724 aaKnown RBP eCLIP13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 OLAHQ9NV23 265 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 MED16Q9Y2X0 877 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 FEZF1A0PJY2 475 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 KLRG2A4D1S0 409 aaPredicted RBP13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 AREGP15514 252 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 CDHR3Q6ZTQ4 885 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 ADGRG3Q86Y34 549 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 C4orf36Q96KX1 117 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 SEC22CQ9BRL7 303 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 ZFP92A6NM28 416 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 CHRM4P08173 479 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 ACSM1Q08AH1 577 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 MANEALQ5VSG8 457 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 C22orf39Q6P5X5 142 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 SLCO2A1Q92959 643 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 CHRDL1Q9BU40 450 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 DECR2Q9NUI1 292 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 B4GALT6Q9UBX8 382 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 RASD1Q9Y272 281 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 BET1O15155 118 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 HNRNPA2B1P22626 353 aaKnown RBP13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 INCA1Q0VD86 236 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 ECM1Q16610 540 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 SCAMP5Q8TAC9 235 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 MARC2Q969Z3 335 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 MS4A4EQ96PG1 132 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 SPHK1Q9NYA1 384 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 PGAP2Q9UHJ9 254 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 NRXN1Q9ULB1 1477 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 DPP4P27487 766 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 DEFB115Q30KQ5 88 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 ZNF805Q5CZA5 627 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 RHEBL1Q8TAI7 183 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 BOCQ9BWV1 1114 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 SHARPINQ9H0F6 387 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 SLC2A6Q9UGQ3 507 aa13.03□□□□□ -0.32
CSPG4P12-202ENST00000559989 HPNP05981 417 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms