RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 SAP130Q9H0E3 1048 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 OR10A4Q9H209 315 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 HHATLQ9HCP6 504 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 ACER3Q9NUN7 267 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 YLPM1P49750 1951 aaKnown RBP11.98□□□□□ -0.49
VPS18-203ENST00000558855 ZNF716A6NP11 495 aa11.98□□□□□ -0.49
VPS18-203ENST00000558855 KIAA1324LA8MWY0 1029 aaPredicted RBP11.98□□□□□ -0.49
VPS18-203ENST00000558855 HMGN4O00479 90 aa11.98□□□□□ -0.49
VPS18-203ENST00000558855 BIRC5O15392 142 aa11.98□□□□□ -0.49
VPS18-203ENST00000558855 RGS16O15492 202 aaPredicted RBP11.98□□□□□ -0.49
VPS18-203ENST00000558855 CLOCKO15516 846 aa11.98□□□□□ -0.49
VPS18-203ENST00000558855 SOX30O94993 753 aa11.98□□□□□ -0.49
VPS18-203ENST00000558855 UQCRC2P22695 453 aa11.98□□□□□ -0.49
VPS18-203ENST00000558855 PCSK6P29122 969 aa11.98□□□□□ -0.49
VPS18-203ENST00000558855 RYKP34925 604 aa11.98□□□□□ -0.49
VPS18-203ENST00000558855 RPL14P50914 215 aaKnown RBP11.98□□□□□ -0.49
VPS18-203ENST00000558855 BSPH1Q075Z2 132 aa11.98□□□□□ -0.49
VPS18-203ENST00000558855 SPOCK1Q08629 439 aa11.98□□□□□ -0.49
VPS18-203ENST00000558855 RASGEF1BQ0VAM2 473 aa11.98□□□□□ -0.49
VPS18-203ENST00000558855 MAD2L1Q13257 205 aaPredicted RBP11.98□□□□□ -0.49
VPS18-203ENST00000558855 PGGHGQ32M88 737 aa11.98□□□□□ -0.49
VPS18-203ENST00000558855 FAM174BQ3ZCQ3 159 aa11.98□□□□□ -0.49
VPS18-203ENST00000558855 SYT14P1Q58G82 188 aa11.98□□□□□ -0.49
VPS18-203ENST00000558855 ADAM5Q6NVV9 412 aa11.98□□□□□ -0.49
VPS18-203ENST00000558855 BHLHA15Q7RTS1 189 aaPredicted RBP11.98□□□□□ -0.49
VPS18-203ENST00000558855 C16orf62Q7Z3J2 963 aa11.98□□□□□ -0.49
VPS18-203ENST00000558855 STEAP2Q8NFT2 490 aa11.98□□□□□ -0.49
VPS18-203ENST00000558855 SLC35A5Q9BS91 424 aa11.98□□□□□ -0.49
VPS18-203ENST00000558855 SLC38A1Q9H2H9 487 aa11.98□□□□□ -0.49
VPS18-203ENST00000558855 WDR55Q9H6Y2 383 aaPredicted RBP11.98□□□□□ -0.49
VPS18-203ENST00000558855 MEAF6Q9HAF1 191 aa11.98□□□□□ -0.49
VPS18-203ENST00000558855 SSU72Q9NP77 194 aaKnown RBP11.98□□□□□ -0.49
VPS18-203ENST00000558855 AIG1Q9NVV5 245 aa11.98□□□□□ -0.49
VPS18-203ENST00000558855 ADAM21Q9UKJ8 722 aa11.98□□□□□ -0.49
VPS18-203ENST00000558855 LAMP3Q9UQV4 416 aa11.98□□□□□ -0.49
VPS18-203ENST00000558855 WDR45Q9Y484 360 aa11.98□□□□□ -0.49
VPS18-203ENST00000558855 RNF115Q9Y4L5 304 aa11.98□□□□□ -0.49
VPS18-203ENST00000558855 MAGED1Q9Y5V3 778 aaPredicted RBP11.98□□□□□ -0.49
VPS18-203ENST00000558855 CSPG4Q6UVK1 2322 aa11.98□□□□□ -0.49
VPS18-203ENST00000558855 GOLGA8QA0A0J9YX86 632 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 PRSS51A0A1B0GVH4 220 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 GOLGA8OA6NCC3 632 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 SHISA9B4DS77 424 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 INAFM1C9JVW0 142 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 E9PBE3 544 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 GOLGA8NF8WBI6 632 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 OVOL3O00110 214 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 AK1P00568 194 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 CD8AP01732 235 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 GSNP06396 782 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 THBS1P07996 1170 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 MYZAPP0CAP1 466 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 LBPP18428 481 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 CCNA2P20248 432 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 COX5AP20674 150 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 IL32P24001 234 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 ITGADQ13349 1161 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 TNK1Q13470 666 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 CEP85LQ5SZL2 805 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 AP1ARQ63HQ0 302 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 GTF2IRD2BQ6EKJ0 949 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 TMPPEQ6ZT21 453 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 Q6ZT83 130 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 MAVSQ7Z434 540 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 GTF2IRD2Q86UP8 949 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 RNF130Q86XS8 419 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 ADGRG3Q86Y34 549 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 CCDC103Q8IW40 242 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 ANKRD42Q8N9B4 389 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 PIWIL2Q8TC59 973 aaKnown RBP11.97□□□□□ -0.49
VPS18-203ENST00000558855 PNPT1Q8TCS8 783 aaKnown RBP11.97□□□□□ -0.49
VPS18-203ENST00000558855 TMEM171Q8WVE6 324 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 ST8SIA1Q92185 356 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 KISS1RQ969F8 398 aaPredicted RBP11.97□□□□□ -0.49
VPS18-203ENST00000558855 REXO5Q96IC2 774 aaKnown RBP11.97□□□□□ -0.49
VPS18-203ENST00000558855 CCDC115Q96NT0 180 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 POTEKPQ9BYX7 375 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 GP6Q9HCN6 339 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 TIGARQ9NQ88 270 aa11.97□□□□□ -0.49
VPS18-203ENST00000558855 MARCOQ9UEW3 520 aaPredicted RBP11.97□□□□□ -0.49
VPS18-203ENST00000558855 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.97□□□□□ -0.49
VPS18-203ENST00000558855 CHD3Q12873 2000 aaKnown RBP11.97□□□□□ -0.49
VPS18-203ENST00000558855 FBN1P35555 2871 aaKnown RBP11.96□□□□□ -0.49
VPS18-203ENST00000558855 A0A1W2PR80 420 aa11.96□□□□□ -0.49
VPS18-203ENST00000558855 ZC3H12DA2A288 527 aaKnown RBP11.96□□□□□ -0.49
VPS18-203ENST00000558855 GJE1A6NN92 205 aa11.96□□□□□ -0.49
VPS18-203ENST00000558855 TM9SF1O15321 606 aa11.96□□□□□ -0.49
VPS18-203ENST00000558855 PABPC4LP0CB38 370 aaKnown RBP11.96□□□□□ -0.49
VPS18-203ENST00000558855 IMPDH2P12268 514 aa11.96□□□□□ -0.49
VPS18-203ENST00000558855 PGCP20142 388 aa11.96□□□□□ -0.49
VPS18-203ENST00000558855 EPHA3P29320 983 aa11.96□□□□□ -0.49
VPS18-203ENST00000558855 KHKP50053 298 aa11.96□□□□□ -0.49
VPS18-203ENST00000558855 MVDP53602 400 aa11.96□□□□□ -0.49
VPS18-203ENST00000558855 ATP5J2P56134 94 aa11.96□□□□□ -0.49
VPS18-203ENST00000558855 STX3Q13277 289 aa11.96□□□□□ -0.49
VPS18-203ENST00000558855 STK11Q15831 433 aa11.96□□□□□ -0.49
VPS18-203ENST00000558855 GTDC1Q4AE62 458 aa11.96□□□□□ -0.49
VPS18-203ENST00000558855 OGFOD2Q6N063 350 aa11.96□□□□□ -0.49
VPS18-203ENST00000558855 EIF3MQ7L2H7 374 aaKnown RBP11.96□□□□□ -0.49
VPS18-203ENST00000558855 SLC43A2Q8N370 569 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms