RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 SIGLEC8Q9NYZ4 499 aa3.34□□□□□ -1.87
CASC4-206ENST00000558847 KLHL21Q9UJP4 597 aa3.34□□□□□ -1.87
CASC4-206ENST00000558847 PRPF19Q9UMS4 504 aaKnown RBP3.34□□□□□ -1.87
CASC4-206ENST00000558847 RRP15Q9Y3B9 282 aaKnown RBP3.34□□□□□ -1.87
CASC4-206ENST00000558847 A0A1B0GWB2 263 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 TRDCB7Z8K6 153 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 UBXN8O00124 270 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 OR10H3O60404 316 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 CLDN9O95484 217 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 ALOX5P09917 674 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 COX5AP20674 150 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 GATA2P23769 480 aaPredicted RBP3.33□□□□□ -1.88
CASC4-206ENST00000558847 IL2RGP31785 369 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 MAP3K8P41279 467 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 CASP4P49662 377 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 TNFRSF17Q02223 184 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 ELAVL3Q14576 367 aaKnown RBP3.33□□□□□ -1.88
CASC4-206ENST00000558847 SSX2Q16385 188 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 IMMTQ16891 758 aaKnown RBP3.33□□□□□ -1.88
CASC4-206ENST00000558847 LRRC36Q1X8D7 754 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 KLHL38Q2WGJ6 581 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 MAJINQ3KP22 176 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 TMEM52BQ4KMG9 183 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 TP53I3Q53FA7 332 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 OR2B11Q5JQS5 317 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 TPGS2Q68CL5 300 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 OR4F3Q6IEY1 312 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 CGB2Q6NT52 195 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 WDR74Q6RFH5 385 aaPredicted RBP3.33□□□□□ -1.88
CASC4-206ENST00000558847 FRA10AC1Q70Z53 315 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 ARCQ7LC44 396 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 TAS2R42Q7RTR8 314 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 TRPM8Q7Z2W7 1104 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 NANOGNBQ7Z5D8 188 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 PPP1R27Q86WC6 154 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 SKA3Q8IX90 412 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 NECAB1Q8N987 351 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 OR4D9Q8NGE8 314 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 GTSF1Q8WW33 167 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 ARNTL2Q8WYA1 636 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 SEC22AQ96IW7 307 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 SMIM14Q96QK8 99 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 IL4I1Q96RQ9 567 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 COPS8Q99627 209 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 SLITRK2Q9H156 845 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 NHEJ1Q9H9Q4 299 aaPredicted RBP3.33□□□□□ -1.88
CASC4-206ENST00000558847 MCCC2Q9HCC0 563 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 B3GNT2Q9NY97 397 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 POLDIP2Q9Y2S7 368 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 ASB3Q9Y575 518 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 TIMM10BQ9Y5J6 103 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 N6AMT1Q9Y5N5 214 aa3.33□□□□□ -1.88
CASC4-206ENST00000558847 RPAP1Q9BWH6 1393 aaPredicted RBP3.33□□□□□ -1.88
CASC4-206ENST00000558847 MED7O43513 233 aa3.32□□□□□ -1.88
CASC4-206ENST00000558847 LATO43561 262 aa3.32□□□□□ -1.88
CASC4-206ENST00000558847 PRKAB2O43741 272 aa3.32□□□□□ -1.88
CASC4-206ENST00000558847 FCMRO60667 390 aa3.32□□□□□ -1.88
CASC4-206ENST00000558847 TSC22D2O75157 780 aa3.32□□□□□ -1.88
CASC4-206ENST00000558847 TSPAN12O95859 305 aa3.32□□□□□ -1.88
CASC4-206ENST00000558847 NCF2P19878 526 aaPredicted RBP3.32□□□□□ -1.88
CASC4-206ENST00000558847 VDAC1P21796 283 aa3.32□□□□□ -1.88
CASC4-206ENST00000558847 GCAP28676 217 aa3.32□□□□□ -1.88
CASC4-206ENST00000558847 LEPP41159 167 aa3.32□□□□□ -1.88
CASC4-206ENST00000558847 STARP49675 285 aa3.32□□□□□ -1.88
CASC4-206ENST00000558847 CRYBB1P53674 252 aaPredicted RBP3.32□□□□□ -1.88
CASC4-206ENST00000558847 LIM2P55344 173 aa3.32□□□□□ -1.88
CASC4-206ENST00000558847 CCDC173Q0VFZ6 552 aa3.32□□□□□ -1.88
CASC4-206ENST00000558847 C1orf61Q13536 156 aa3.32□□□□□ -1.88
CASC4-206ENST00000558847 KIAA0040Q15053 153 aa3.32□□□□□ -1.88
CASC4-206ENST00000558847 PHYHD1Q5SRE7 291 aa3.32□□□□□ -1.88
CASC4-206ENST00000558847 ATL3Q6DD88 541 aa3.32□□□□□ -1.88
CASC4-206ENST00000558847 Q6ZR54 194 aa3.32□□□□□ -1.88
CASC4-206ENST00000558847 ATP6V0D2Q8N8Y2 350 aa3.32□□□□□ -1.88
CASC4-206ENST00000558847 MFSD9Q8NBP5 474 aa3.32□□□□□ -1.88
CASC4-206ENST00000558847 TYMSOSQ8TAI1 123 aa3.32□□□□□ -1.88
CASC4-206ENST00000558847 FAM122AQ96E09 287 aa3.32□□□□□ -1.88
CASC4-206ENST00000558847 CLCC1Q96S66 551 aa3.32□□□□□ -1.88
CASC4-206ENST00000558847 ZNF670Q9BS34 389 aa3.32□□□□□ -1.88
CASC4-206ENST00000558847 SRXN1Q9BYN0 137 aa3.32□□□□□ -1.88
CASC4-206ENST00000558847 RAB18Q9NP72 206 aa3.32□□□□□ -1.88
CASC4-206ENST00000558847 FANCFQ9NPI8 374 aa3.32□□□□□ -1.88
CASC4-206ENST00000558847 HYPKQ9NX55 129 aa3.32□□□□□ -1.88
CASC4-206ENST00000558847 SEC14L3Q9UDX4 400 aa3.32□□□□□ -1.88
CASC4-206ENST00000558847 ZNF107Q9UII5 783 aaPredicted RBP3.32□□□□□ -1.88
CASC4-206ENST00000558847 ADAM28Q9UKQ2 775 aa3.32□□□□□ -1.88
CASC4-206ENST00000558847 TMCO1Q9UM00 188 aa3.32□□□□□ -1.88
CASC4-206ENST00000558847 RABL2BQ9UNT1 228 aa3.32□□□□□ -1.88
CASC4-206ENST00000558847 CLSPNQ9HAW4 1339 aa3.32□□□□□ -1.88
CASC4-206ENST00000558847 HCFC1P51610 2035 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 CCDC182A6NF36 153 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 HELTA6NFD8 242 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 FRG2CA6NGY1 282 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 SNTNA6NMZ2 147 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 HIP1O00291 1037 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 CDX4O14627 284 aaPredicted RBP3.31□□□□□ -1.88
CASC4-206ENST00000558847 PFKFB2O60825 505 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 SLITRK3O94933 977 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 NDUFB10O96000 172 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 SEMG1P04279 462 aa3.31□□□□□ -1.88
CASC4-206ENST00000558847 MX1P20591 662 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms