RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.6□□□□□ -0.71
HERC1-202ENST00000558324 SLC6A13Q9NSD5 602 aa10.6□□□□□ -0.71
HERC1-202ENST00000558324 GPR52Q9Y2T5 361 aa10.6□□□□□ -0.71
HERC1-202ENST00000558324 NUP214P35658 2090 aaPredicted RBP10.6□□□□□ -0.71
HERC1-202ENST00000558324 MED13LQ71F56 2210 aa10.6□□□□□ -0.71
HERC1-202ENST00000558324 SULT2B1O00204 365 aa10.59□□□□□ -0.71
HERC1-202ENST00000558324 KLF4O43474 513 aa10.59□□□□□ -0.71
HERC1-202ENST00000558324 SMPD2O60906 423 aa10.59□□□□□ -0.71
HERC1-202ENST00000558324 GCM2O75603 506 aaPredicted RBP10.59□□□□□ -0.71
HERC1-202ENST00000558324 KRT75O95678 551 aa10.59□□□□□ -0.71
HERC1-202ENST00000558324 PLAUP00749 431 aa10.59□□□□□ -0.71
HERC1-202ENST00000558324 ADAP00813 363 aa10.59□□□□□ -0.71
HERC1-202ENST00000558324 IL6P05231 212 aa10.59□□□□□ -0.71
HERC1-202ENST00000558324 GUSBP08236 651 aa10.59□□□□□ -0.71
HERC1-202ENST00000558324 PSMB1P20618 241 aaKnown RBP10.59□□□□□ -0.71
HERC1-202ENST00000558324 EDNRAP25101 427 aa10.59□□□□□ -0.71
HERC1-202ENST00000558324 IDH2P48735 452 aaKnown RBP10.59□□□□□ -0.71
HERC1-202ENST00000558324 RASGEF1BQ0VAM2 473 aa10.59□□□□□ -0.71
HERC1-202ENST00000558324 GTDC1Q4AE62 458 aa10.59□□□□□ -0.71
HERC1-202ENST00000558324 C6orf10Q5SRN2 563 aa10.59□□□□□ -0.71
HERC1-202ENST00000558324 ZNF704Q6ZNC4 412 aaPredicted RBP10.59□□□□□ -0.71
HERC1-202ENST00000558324 GRINAQ7Z429 371 aa10.59□□□□□ -0.71
HERC1-202ENST00000558324 KRTAP1-3Q8IUG1 177 aa10.59□□□□□ -0.71
HERC1-202ENST00000558324 P3H2Q8IVL5 708 aa10.59□□□□□ -0.71
HERC1-202ENST00000558324 GABRG1Q8N1C3 465 aa10.59□□□□□ -0.71
HERC1-202ENST00000558324 GLB1L3Q8NCI6 653 aaPredicted RBP10.59□□□□□ -0.71
HERC1-202ENST00000558324 STEAP2Q8NFT2 490 aa10.59□□□□□ -0.71
HERC1-202ENST00000558324 PIWIL2Q8TC59 973 aaKnown RBP10.59□□□□□ -0.71
HERC1-202ENST00000558324 SLC25A43Q8WUT9 341 aaPredicted RBP10.59□□□□□ -0.71
HERC1-202ENST00000558324 WDR60Q8WVS4 1066 aa10.59□□□□□ -0.71
HERC1-202ENST00000558324 OIT3Q8WWZ8 545 aa10.59□□□□□ -0.71
HERC1-202ENST00000558324 ZNF75CPQ92670 426 aaPredicted RBP10.59□□□□□ -0.71
HERC1-202ENST00000558324 VPS33AQ96AX1 596 aa10.59□□□□□ -0.71
HERC1-202ENST00000558324 PERPQ96FX8 193 aa10.59□□□□□ -0.71
HERC1-202ENST00000558324 MAELQ96JY0 434 aaKnown RBP10.59□□□□□ -0.71
HERC1-202ENST00000558324 TRNT1Q96Q11 434 aaKnown RBP10.59□□□□□ -0.71
HERC1-202ENST00000558324 CCDC106Q9BWC9 280 aa10.59□□□□□ -0.71
HERC1-202ENST00000558324 OR11A1Q9GZK7 315 aa10.59□□□□□ -0.71
HERC1-202ENST00000558324 GP6Q9HCN6 339 aa10.59□□□□□ -0.71
HERC1-202ENST00000558324 CHRNA9Q9UGM1 479 aa10.59□□□□□ -0.71
HERC1-202ENST00000558324 PRSS50Q9UI38 385 aa10.59□□□□□ -0.71
HERC1-202ENST00000558324 ING1Q9UK53 422 aaPredicted RBP10.59□□□□□ -0.71
HERC1-202ENST00000558324 LIPT1Q9Y234 373 aa10.59□□□□□ -0.71
HERC1-202ENST00000558324 SPIN1Q9Y657 262 aaPredicted RBP10.59□□□□□ -0.71
HERC1-202ENST00000558324 AGAP5A6NIR3 686 aa10.58□□□□□ -0.72
HERC1-202ENST00000558324 ZNF814B7Z6K7 855 aa10.58□□□□□ -0.72
HERC1-202ENST00000558324 UBDO15205 165 aa10.58□□□□□ -0.72
HERC1-202ENST00000558324 CYTIPO60759 359 aa10.58□□□□□ -0.72
HERC1-202ENST00000558324 BCHEP06276 602 aa10.58□□□□□ -0.72
HERC1-202ENST00000558324 ETFAP13804 333 aa10.58□□□□□ -0.72
HERC1-202ENST00000558324 IL7RP16871 459 aa10.58□□□□□ -0.72
HERC1-202ENST00000558324 FPR1P21462 350 aa10.58□□□□□ -0.72
HERC1-202ENST00000558324 HOXC12P31275 282 aa10.58□□□□□ -0.72
HERC1-202ENST00000558324 APOBEC1P41238 236 aaKnown RBP10.58□□□□□ -0.72
HERC1-202ENST00000558324 CRATP43155 626 aa10.58□□□□□ -0.72
HERC1-202ENST00000558324 CSNK2A1P68400 391 aaPredicted RBP10.58□□□□□ -0.72
HERC1-202ENST00000558324 LRRC74AQ0VAA2 488 aa10.58□□□□□ -0.72
HERC1-202ENST00000558324 CAPRIN1Q14444 709 aaKnown RBP10.58□□□□□ -0.72
HERC1-202ENST00000558324 GSTA3Q16772 222 aa10.58□□□□□ -0.72
HERC1-202ENST00000558324 Q5PR19 223 aa10.58□□□□□ -0.72
HERC1-202ENST00000558324 SFRP5Q5T4F7 317 aa10.58□□□□□ -0.72
HERC1-202ENST00000558324 MRPL2Q5T653 305 aaKnown RBP10.58□□□□□ -0.72
HERC1-202ENST00000558324 C20orf204Q6ZNR8 217 aa10.58□□□□□ -0.72
HERC1-202ENST00000558324 LRRC74BQ6ZQY2 392 aa10.58□□□□□ -0.72
HERC1-202ENST00000558324 TMPPEQ6ZT21 453 aa10.58□□□□□ -0.72
HERC1-202ENST00000558324 MIER2Q8N344 545 aa10.58□□□□□ -0.72
HERC1-202ENST00000558324 KISS1RQ969F8 398 aaPredicted RBP10.58□□□□□ -0.72
HERC1-202ENST00000558324 PIGTQ969N2 578 aa10.58□□□□□ -0.72
HERC1-202ENST00000558324 AURKBQ96GD4 344 aaPredicted RBP10.58□□□□□ -0.72
HERC1-202ENST00000558324 ARL5BQ96KC2 179 aa10.58□□□□□ -0.72
HERC1-202ENST00000558324 TACO1Q9BSH4 297 aaKnown RBP10.58□□□□□ -0.72
HERC1-202ENST00000558324 GSX1Q9H4S2 264 aaPredicted RBP10.58□□□□□ -0.72
HERC1-202ENST00000558324 RMND5AQ9H871 391 aa10.58□□□□□ -0.72
HERC1-202ENST00000558324 BCO1Q9HAY6 547 aa10.58□□□□□ -0.72
HERC1-202ENST00000558324 EXOSC3Q9NQT5 275 aaKnown RBP10.58□□□□□ -0.72
HERC1-202ENST00000558324 SDR39U1Q9NRG7 319 aaPredicted RBP10.58□□□□□ -0.72
HERC1-202ENST00000558324 ZIM2Q9NZV7 527 aa10.58□□□□□ -0.72
HERC1-202ENST00000558324 USH1CQ9Y6N9 552 aa10.58□□□□□ -0.72
HERC1-202ENST00000558324 TMED7-TICAM2A0A0A6YYA0 188 aa10.57□□□□□ -0.72
HERC1-202ENST00000558324 KLF11O14901 512 aa10.57□□□□□ -0.72
HERC1-202ENST00000558324 CLOCKO15516 846 aa10.57□□□□□ -0.72
HERC1-202ENST00000558324 LYZL6O75951 148 aa10.57□□□□□ -0.72
HERC1-202ENST00000558324 IGHV3-9P01782 118 aa10.57□□□□□ -0.72
HERC1-202ENST00000558324 DBIP07108 87 aaKnown RBP10.57□□□□□ -0.72
HERC1-202ENST00000558324 OR3A2P47893 321 aa10.57□□□□□ -0.72
HERC1-202ENST00000558324 POLR2JP52435 117 aaKnown RBP10.57□□□□□ -0.72
HERC1-202ENST00000558324 NR1H2P55055 460 aa10.57□□□□□ -0.72
HERC1-202ENST00000558324 OR2B6P58173 313 aa10.57□□□□□ -0.72
HERC1-202ENST00000558324 DSTNP60981 165 aa10.57□□□□□ -0.72
HERC1-202ENST00000558324 TXNL4AP83876 142 aaKnown RBP10.57□□□□□ -0.72
HERC1-202ENST00000558324 GNA13Q14344 377 aa10.57□□□□□ -0.72
HERC1-202ENST00000558324 TAB1Q15750 504 aa10.57□□□□□ -0.72
HERC1-202ENST00000558324 STK11Q15831 433 aa10.57□□□□□ -0.72
HERC1-202ENST00000558324 RPS26P11Q5JNZ5 115 aaPredicted RBP10.57□□□□□ -0.72
HERC1-202ENST00000558324 AGBL2Q5U5Z8 902 aa10.57□□□□□ -0.72
HERC1-202ENST00000558324 ABLIM2Q6H8Q1 611 aa10.57□□□□□ -0.72
HERC1-202ENST00000558324 BHLHA15Q7RTS1 189 aaPredicted RBP10.57□□□□□ -0.72
HERC1-202ENST00000558324 ATG4DQ86TL0 474 aaPredicted RBP10.57□□□□□ -0.72
HERC1-202ENST00000558324 VRK2Q86Y07 508 aa10.57□□□□□ -0.72
HERC1-202ENST00000558324 ADGRG3Q86Y34 549 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms