RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 C21orf140B9A014 251 aa11.4□□□□□ -0.59
SHMT2-233ENST00000557529 TLX2O43763 284 aaPredicted RBP11.4□□□□□ -0.59
SHMT2-233ENST00000557529 PRKYO43930 277 aa11.4□□□□□ -0.59
SHMT2-233ENST00000557529 ZNF354AO60765 605 aaPredicted RBP11.4□□□□□ -0.59
SHMT2-233ENST00000557529 ENTPD6O75354 484 aa11.4□□□□□ -0.59
SHMT2-233ENST00000557529 OR2J2O76002 312 aa11.4□□□□□ -0.59
SHMT2-233ENST00000557529 DKK1O94907 266 aa11.4□□□□□ -0.59
SHMT2-233ENST00000557529 MT-ND2P03891 347 aa11.4□□□□□ -0.59
SHMT2-233ENST00000557529 PIPP12273 146 aaPredicted RBP11.4□□□□□ -0.59
SHMT2-233ENST00000557529 GP1BBP13224 206 aa11.4□□□□□ -0.59
SHMT2-233ENST00000557529 ICAM2P13598 275 aa11.4□□□□□ -0.59
SHMT2-233ENST00000557529 PTNP21246 168 aa11.4□□□□□ -0.59
SHMT2-233ENST00000557529 GRK5P34947 590 aa11.4□□□□□ -0.59
SHMT2-233ENST00000557529 SUMO3P55854 103 aaPredicted RBP11.4□□□□□ -0.59
SHMT2-233ENST00000557529 EFNB1P98172 346 aa11.4□□□□□ -0.59
SHMT2-233ENST00000557529 PIGFQ07326 219 aa11.4□□□□□ -0.59
SHMT2-233ENST00000557529 C17orf67Q0P5P2 114 aa11.4□□□□□ -0.59
SHMT2-233ENST00000557529 PMS2P3Q13401 168 aa11.4□□□□□ -0.59
SHMT2-233ENST00000557529 RAB39AQ14964 217 aa11.4□□□□□ -0.59
SHMT2-233ENST00000557529 CLEC12AQ5QGZ9 265 aa11.4□□□□□ -0.59
SHMT2-233ENST00000557529 XAF1Q6GPH4 301 aa11.4□□□□□ -0.59
SHMT2-233ENST00000557529 SMARCD3Q6STE5 483 aa11.4□□□□□ -0.59
SHMT2-233ENST00000557529 LYPD8Q6UX82 237 aa11.4□□□□□ -0.59
SHMT2-233ENST00000557529 RTL4Q6ZR62 310 aa11.4□□□□□ -0.59
SHMT2-233ENST00000557529 OAFQ86UD1 273 aa11.4□□□□□ -0.59
SHMT2-233ENST00000557529 DEFB124Q8NES8 71 aa11.4□□□□□ -0.59
SHMT2-233ENST00000557529 NLGN4YQ8NFZ3 816 aaPredicted RBP11.4□□□□□ -0.59
SHMT2-233ENST00000557529 RNF138Q8WVD3 245 aa11.4□□□□□ -0.59
SHMT2-233ENST00000557529 FCGR1BQ92637 280 aa11.4□□□□□ -0.59
SHMT2-233ENST00000557529 GGHQ92820 318 aa11.4□□□□□ -0.59
SHMT2-233ENST00000557529 TMIGD2Q96BF3 282 aa11.4□□□□□ -0.59
SHMT2-233ENST00000557529 SIGLEC11Q96RL6 698 aa11.4□□□□□ -0.59
SHMT2-233ENST00000557529 RTN4RQ9BZR6 473 aa11.4□□□□□ -0.59
SHMT2-233ENST00000557529 ADAM19Q9H013 955 aa11.4□□□□□ -0.59
SHMT2-233ENST00000557529 RBM38Q9H0Z9 239 aaKnown RBP11.4□□□□□ -0.59
SHMT2-233ENST00000557529 UBQLN3Q9H347 655 aa11.4□□□□□ -0.59
SHMT2-233ENST00000557529 SDHAF3Q9NRP4 125 aa11.4□□□□□ -0.59
SHMT2-233ENST00000557529 FOXJ2Q9P0K8 574 aa11.4□□□□□ -0.59
SHMT2-233ENST00000557529 SIGLEC7Q9Y286 467 aa11.4□□□□□ -0.59
SHMT2-233ENST00000557529 OTOGLQ3ZCN5 2332 aa11.4□□□□□ -0.59
SHMT2-233ENST00000557529 TP53I11O14683 189 aa11.39□□□□□ -0.59
SHMT2-233ENST00000557529 GNB5O14775 395 aa11.39□□□□□ -0.59
SHMT2-233ENST00000557529 PTP4A3O75365 173 aa11.39□□□□□ -0.59
SHMT2-233ENST00000557529 NUDT14O95848 222 aa11.39□□□□□ -0.59
SHMT2-233ENST00000557529 HPP00738 406 aa11.39□□□□□ -0.59
SHMT2-233ENST00000557529 CDK1P06493 297 aa11.39□□□□□ -0.59
SHMT2-233ENST00000557529 PCMT1P22061 227 aa11.39□□□□□ -0.59
SHMT2-233ENST00000557529 TACR3P29371 465 aa11.39□□□□□ -0.59
SHMT2-233ENST00000557529 HTR3AP46098 478 aa11.39□□□□□ -0.59
SHMT2-233ENST00000557529 NUDT6P53370 316 aa11.39□□□□□ -0.59
SHMT2-233ENST00000557529 EMX1Q04741 257 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-233ENST00000557529 DNASE1L3Q13609 305 aa11.39□□□□□ -0.59
SHMT2-233ENST00000557529 NTRK2Q16620 822 aa11.39□□□□□ -0.59
SHMT2-233ENST00000557529 SLC30A6Q6NXT4 461 aa11.39□□□□□ -0.59
SHMT2-233ENST00000557529 OPN5Q6U736 354 aa11.39□□□□□ -0.59
SHMT2-233ENST00000557529 PPP1R32Q7Z5V6 425 aa11.39□□□□□ -0.59
SHMT2-233ENST00000557529 DND1Q8IYX4 353 aaKnown RBP11.39□□□□□ -0.59
SHMT2-233ENST00000557529 LNX2Q8N448 690 aa11.39□□□□□ -0.59
SHMT2-233ENST00000557529 STX19Q8N4C7 294 aa11.39□□□□□ -0.59
SHMT2-233ENST00000557529 AMER2Q8N7J2 671 aa11.39□□□□□ -0.59
SHMT2-233ENST00000557529 OR5M3Q8NGP4 307 aa11.39□□□□□ -0.59
SHMT2-233ENST00000557529 OR13F1Q8NGS4 319 aa11.39□□□□□ -0.59
SHMT2-233ENST00000557529 OR13C2Q8NGS9 318 aa11.39□□□□□ -0.59
SHMT2-233ENST00000557529 OR4Q3Q8NH05 313 aa11.39□□□□□ -0.59
SHMT2-233ENST00000557529 C9orf43Q8TAL5 461 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-233ENST00000557529 GPR119Q8TDV5 335 aa11.39□□□□□ -0.59
SHMT2-233ENST00000557529 DUSP19Q8WTR2 217 aa11.39□□□□□ -0.59
SHMT2-233ENST00000557529 RORBQ92753 470 aa11.39□□□□□ -0.59
SHMT2-233ENST00000557529 MUL1Q969V5 352 aa11.39□□□□□ -0.59
SHMT2-233ENST00000557529 SPACA9Q96E40 222 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-233ENST00000557529 LRR1Q96L50 414 aa11.39□□□□□ -0.59
SHMT2-233ENST00000557529 RASL10BQ96S79 203 aa11.39□□□□□ -0.59
SHMT2-233ENST00000557529 AMBNQ9NP70 447 aa11.39□□□□□ -0.59
SHMT2-233ENST00000557529 GPR83Q9NYM4 423 aa11.39□□□□□ -0.59
SHMT2-233ENST00000557529 DNAJC27Q9NZQ0 273 aa11.39□□□□□ -0.59
SHMT2-233ENST00000557529 YARS2Q9Y2Z4 477 aaKnown RBP11.39□□□□□ -0.59
SHMT2-233ENST00000557529 CEPT1Q9Y6K0 416 aa11.39□□□□□ -0.59
SHMT2-233ENST00000557529 MUC3AQ02505 3323 aa11.38□□□□□ -0.59
SHMT2-233ENST00000557529 IGKV1D-42A0A075B6H8 117 aa11.38□□□□□ -0.59
SHMT2-233ENST00000557529 IRGMA1A4Y4 181 aa11.38□□□□□ -0.59
SHMT2-233ENST00000557529 ANKUB1A6NFN9 424 aa11.38□□□□□ -0.59
SHMT2-233ENST00000557529 ZNF99A8MXY4 864 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-233ENST00000557529 H3BSA7 217 aa11.38□□□□□ -0.59
SHMT2-233ENST00000557529 ZNF701M0R085 212 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-233ENST00000557529 M0R3G1 203 aa11.38□□□□□ -0.59
SHMT2-233ENST00000557529 SURF4O15260 269 aa11.38□□□□□ -0.59
SHMT2-233ENST00000557529 SEC14L2O76054 403 aa11.38□□□□□ -0.59
SHMT2-233ENST00000557529 OR7A10O76100 309 aa11.38□□□□□ -0.59
SHMT2-233ENST00000557529 TNFSF15O95150 251 aa11.38□□□□□ -0.59
SHMT2-233ENST00000557529 FTH1P19P0C7X4 201 aa11.38□□□□□ -0.59
SHMT2-233ENST00000557529 CXCR1P25024 350 aa11.38□□□□□ -0.59
SHMT2-233ENST00000557529 MST1P26927 711 aa11.38□□□□□ -0.59
SHMT2-233ENST00000557529 MSX1P28360 303 aa11.38□□□□□ -0.59
SHMT2-233ENST00000557529 SLC6A6P31641 620 aa11.38□□□□□ -0.59
SHMT2-233ENST00000557529 OTX2P32243 289 aa11.38□□□□□ -0.59
SHMT2-233ENST00000557529 SLC15A1P46059 708 aa11.38□□□□□ -0.59
SHMT2-233ENST00000557529 LIMK1P53667 647 aa11.38□□□□□ -0.59
SHMT2-233ENST00000557529 FXYD6P3P58550 94 aa11.38□□□□□ -0.59
SHMT2-233ENST00000557529 ST3GAL4Q11206 333 aa11.38□□□□□ -0.59
SHMT2-233ENST00000557529 QPRTQ15274 297 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms