RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 KIRREL1Q96J84 757 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 KCNJ15Q99712 375 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 EBF4Q9BQW3 602 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 TMEM127O75204 238 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 ITGAMP11215 1152 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 SELPP16109 830 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 ACOT6Q3I5F7 207 aaPredicted RBP8.33□□□□□ -1.08
SYNE3-205ENST00000557275 SLC22A6Q4U2R8 563 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 DESI1Q6ICB0 168 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 CPNE8Q86YQ8 564 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 SMOC2Q9H3U7 446 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 SEMA4GQ9NTN9 838 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 LOC102723971A0A1B0GUV8 181 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 PHOX2AO14813 284 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 KIAA0355O15063 1070 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 MLLT11Q13015 90 aaPredicted RBP8.33□□□□□ -1.08
SYNE3-205ENST00000557275 SLC35F2Q8IXU6 374 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 NAT8LQ8N9F0 302 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 SFXN2Q96NB2 322 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 NKX6-2Q9C056 277 aaPredicted RBP8.33□□□□□ -1.08
SYNE3-205ENST00000557275 DTLQ9NZJ0 730 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 CXXC1Q9P0U4 656 aaPredicted RBP8.33□□□□□ -1.08
SYNE3-205ENST00000557275 OR1A2Q9Y585 309 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 UBE2Q2LH0YL09 131 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 DDAH2O95865 285 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 ZNF28P17035 718 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 PCGF2P35227 344 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 RPS18P62269 152 aaKnown RBP8.33□□□□□ -1.08
SYNE3-205ENST00000557275 GLYR1Q49A26 553 aaPredicted RBP8.33□□□□□ -1.08
SYNE3-205ENST00000557275 DGAT2L6Q6ZPD8 337 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 ACER1Q8TDN7 264 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 FOXJ1Q92949 421 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 SLC22A12Q96S37 553 aa8.33□□□□□ -1.08
SYNE3-205ENST00000557275 ARPC1BO15143 372 aaKnown RBP8.32□□□□□ -1.08
SYNE3-205ENST00000557275 SIAH2O43255 324 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 GABRA3P34903 492 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 RPS15P62841 145 aaKnown RBP8.32□□□□□ -1.08
SYNE3-205ENST00000557275 CES4AQ5XG92 561 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 TIGD3Q6B0B8 471 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 PLXDC1Q8IUK5 500 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 SRRQ9GZT4 340 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 YIPF1Q9Y548 306 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 AGLP35573 1532 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 OR6C68A6NDL8 312 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 G3V3Q6 166 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 CLDN5O00501 218 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 TERTO14746 1132 aaKnown RBP8.32□□□□□ -1.08
SYNE3-205ENST00000557275 PREPP48147 710 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 CXADRP78310 365 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 H3F3CQ6NXT2 135 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 FAM163AQ96GL9 167 aaPredicted RBP8.32□□□□□ -1.08
SYNE3-205ENST00000557275 BORCS6Q96GS4 357 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 OR51I2Q9H344 312 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 ESRP2Q9H6T0 727 aaKnown RBP8.32□□□□□ -1.08
SYNE3-205ENST00000557275 CPA4Q9UI42 421 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 PCDHGA1Q9Y5H4 931 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 MEOX1P50221 254 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 BAXQ07812 192 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 ADAM5Q6NVV9 412 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 OR4E2Q8NGC2 313 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 ZNF566Q969W8 418 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 BABAM2Q9NXR7 383 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 CTXN2P0C2S0 81 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 OR8U8P0C7N1 319 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 GIFP27352 417 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 TBCEQ15813 527 aaPredicted RBP8.32□□□□□ -1.08
SYNE3-205ENST00000557275 SLC23A2Q9UGH3 650 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 CD84Q9UIB8 345 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 TMEM98Q9Y2Y6 226 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 PCDHGC4Q9Y5F7 938 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 UBIAD1Q9Y5Z9 338 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 ANKRD63C9JTQ0 380 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 TSPAN6O43657 245 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 HOXA11P31270 313 aaPredicted RBP8.32□□□□□ -1.08
SYNE3-205ENST00000557275 SOX18P35713 384 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 ZNF239Q16600 458 aaKnown RBP8.32□□□□□ -1.08
SYNE3-205ENST00000557275 OR52E2Q8NGJ4 325 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 OR2F2O95006 317 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 ZIC2O95409 532 aaPredicted RBP8.32□□□□□ -1.08
SYNE3-205ENST00000557275 G0S2P27469 103 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 LILRA4P59901 499 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 OR2F1Q13607 317 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 PCED1BQ96HM7 432 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 NLE1Q9NVX2 485 aaPredicted RBP8.32□□□□□ -1.08
SYNE3-205ENST00000557275 COL5A2P05997 1499 aaPredicted RBP8.32□□□□□ -1.08
SYNE3-205ENST00000557275 CFIP05156 583 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 SGSHP51688 502 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 TSLPQ969D9 159 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 RPL10LQ96L21 214 aaKnown RBP8.32□□□□□ -1.08
SYNE3-205ENST00000557275 SLC25A32Q9H2D1 315 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 ZNF337Q9Y3M9 751 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 ENPP3O14638 875 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 TGM1P22735 817 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 REEP5Q00765 189 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 VEZF1Q14119 521 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 OR2M3Q8NG83 312 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 SCARB1Q8WTV0 552 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 CPNE4Q96A23 557 aaPredicted RBP8.32□□□□□ -1.08
SYNE3-205ENST00000557275 MBD5Q9P267 1494 aa8.32□□□□□ -1.08
SYNE3-205ENST00000557275 DEDDO75618 318 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms