RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 SLC22A25Q6T423 547 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 FAM151BQ6UXP7 276 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 HSDL2Q6YN16 418 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 ZNF767PQ75MW2 155 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 TRILQ7L0X0 811 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 NRARPQ7Z6K4 114 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 ANKRD46Q86W74 232 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 RDH10Q8IZV5 341 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 CYP4Z2PQ8N1L4 340 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 SLC5A8Q8N695 610 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 CLDN22Q8N7P3 220 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 PRR26Q8N8Z3 221 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 Q8N9G6 341 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-246ENST00000557030 B3GNT7Q8NFL0 401 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 OR4C15Q8NGM1 316 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 OR10Q1Q8NGQ4 319 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 GOT1L1Q8NHS2 421 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-246ENST00000557030 WDR36Q8NI36 951 aaKnown RBP4.34□□□□□ -1.71
ATXN3-246ENST00000557030 ENKURQ8TC29 256 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 SUN5Q8TC36 379 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 SPPL2AQ8TCT8 520 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 UTP15Q8TED0 518 aaKnown RBP4.34□□□□□ -1.71
ATXN3-246ENST00000557030 AP3S1Q92572 193 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 SH3KBP1Q96B97 665 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 TMEM80Q96HE8 168 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 OPALINQ96PE5 141 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 SMIM14Q96QK8 99 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 GFM1Q96RP9 751 aaKnown RBP4.34□□□□□ -1.71
ATXN3-246ENST00000557030 FEVQ99581 238 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 SEPT5Q99719 369 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-246ENST00000557030 PIP5K1AQ99755 562 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 NUDT16L1Q9BRJ7 211 aaKnown RBP4.34□□□□□ -1.71
ATXN3-246ENST00000557030 TMEM175Q9BSA9 504 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 RHNO1Q9BSD3 238 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 TMEM204Q9BSN7 226 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 CCM2Q9BSQ5 444 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 TAPBPLQ9BX59 468 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 BBS2Q9BXC9 721 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 SRRQ9GZT4 340 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 TMEM38AQ9H6F2 299 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 BRF2Q9HAW0 419 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 BPIFA1Q9NP55 256 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 RPRD1BQ9NQG5 326 aaKnown RBP4.34□□□□□ -1.71
ATXN3-246ENST00000557030 SLC6A13Q9NSD5 602 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 MS4A12Q9NXJ0 267 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 MRPL39Q9NYK5 338 aaKnown RBP4.34□□□□□ -1.71
ATXN3-246ENST00000557030 GPR83Q9NYM4 423 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 ZNF226Q9NYT6 803 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 VPS29Q9UBQ0 182 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 RAB23Q9ULC3 237 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 TBC1D24Q9ULP9 559 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 TMCC3Q9ULS5 477 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 SSR3Q9UNL2 185 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 ANGPT4Q9Y264 503 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 KLHL20Q9Y2M5 609 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 RPL36Q9Y3U8 105 aaKnown RBP4.34□□□□□ -1.71
ATXN3-246ENST00000557030 COL4A6Q14031 1691 aa4.34□□□□□ -1.71
ATXN3-246ENST00000557030 CHD5Q8TDI0 1954 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 CXorf51AA0A1B0GTR3 108 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 C1orf226A1L170 272 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 SYNDIG1LA6NDD5 238 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 ZNF840PA6NDX5 716 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 MGAT4DA6NG13 374 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 AGAP14A8MT82 685 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 H0YIV9 168 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 TLR4O00206 839 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 GAPDHSO14556 408 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-246ENST00000557030 CTDSP2O14595 271 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 MYL12BO14950 172 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 COCHO43405 550 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 SCN2BO60939 215 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 SOCS5O75159 536 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 SEMA3DO95025 777 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 DIRAS1O95057 198 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 LRATO95237 230 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 CPSF4O95639 269 aaKnown RBP4.33□□□□□ -1.72
ATXN3-246ENST00000557030 CD160O95971 181 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 C1QBP02746 253 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 CXCL10P02778 98 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 ALPPP05187 535 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 M6PRP20645 277 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 MAGP20916 626 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 CBLP22681 906 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 CPN2P22792 545 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 MYL9P24844 172 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 HOXD10P28358 340 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 SDC2P34741 201 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 XCR1P46094 333 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 NUDT6P53370 316 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 SMIM11AP58511 58 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 PPP3R1P63098 170 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 PSPHP78330 225 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 IRF8Q02556 426 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 BCL2L1Q07817 233 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 Q0VFX4 171 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 CHIT1Q13231 466 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 SCARB2Q14108 478 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 HNF4GQ14541 408 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 ANGPT1Q15389 498 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 RPE65Q16518 533 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms