RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 PTGDSP41222 190 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 BTDP43251 543 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 OR3A4PP47883 348 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 ZNF133P52736 654 aaPredicted RBP1.98□□□□□ -2.09
SCFD1-218ENST00000556256 HSPA2P54652 639 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 ZNF45Q02386 682 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 BCL2L1Q07817 233 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 C1orf61Q13536 156 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 CUL1Q13616 776 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 TPD52L1Q16890 204 aaPredicted RBP1.98□□□□□ -2.09
SCFD1-218ENST00000556256 CFAP221Q4G0U5 840 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 ATF7IP2Q5U623 682 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 SYT10Q6XYQ8 523 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 SCARA5Q6ZMJ2 495 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 IL34Q6ZMJ4 242 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 DNM1P46Q6ZS02 220 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 PPP1R42Q7Z4L9 355 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 ACOT1Q86TX2 421 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 LCA5Q86VQ0 697 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 TPRA1Q86W33 373 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 BBS1Q8NFJ9 593 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 STXBP6Q8NFX7 210 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 OR10H4Q8NGA5 316 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 OR52M1Q8NGK5 317 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 C7orf33Q8WU49 177 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 CTNNBL1Q8WYA6 563 aaPredicted RBP1.98□□□□□ -2.09
SCFD1-218ENST00000556256 PIGCQ92535 297 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 C16orf74Q96GX8 76 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 SMIM14Q96QK8 99 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 CCNL2Q96S94 520 aaPredicted RBP1.98□□□□□ -2.09
SCFD1-218ENST00000556256 ZNF607Q96SK3 696 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 MAPKAP1Q9BPZ7 522 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 KLHDC3Q9BQ90 382 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 CRACR2AQ9BSW2 395 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 ZSCAN5AQ9BUG6 496 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 NUDT15Q9NV35 164 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 SMOXQ9NWM0 555 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 RNF14Q9UBS8 474 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 DCDC2Q9UHG0 476 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 PCSK1NQ9UHG2 260 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 UBQLN1Q9UMX0 589 aaKnown RBP1.98□□□□□ -2.09
SCFD1-218ENST00000556256 KDRP35968 1356 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 TNRQ92752 1358 aa1.98□□□□□ -2.09
SCFD1-218ENST00000556256 FAM231BA6NCW3 169 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 VSTM2BA6NLU5 285 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 PRRG1O14668 218 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 ARPC3O15145 178 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 MAGEB3O15480 346 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 TPST2O60704 377 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 TBL1XO60907 577 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 SLITRK3O94933 977 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 UGT2B4P06133 528 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 LEPP41159 167 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 SLC26A2P50443 739 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 ARFIP1P53367 373 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 SPIBQ01892 262 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 CHRNB3Q05901 458 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 MESDQ14696 234 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 GANABQ14697 944 aaKnown RBP1.97□□□□□ -2.09
SCFD1-218ENST00000556256 KYAT1Q16773 422 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 CCDC14Q49A88 953 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 TP53I3Q53FA7 332 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 C10orf120Q5SQS8 335 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 WDR74Q6RFH5 385 aaPredicted RBP1.97□□□□□ -2.09
SCFD1-218ENST00000556256 UNQ9370/PRO34162Q6UXP9 181 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 HSD17B13Q7Z5P4 300 aaPredicted RBP1.97□□□□□ -2.09
SCFD1-218ENST00000556256 ZNF589Q86UQ0 364 aaPredicted RBP1.97□□□□□ -2.09
SCFD1-218ENST00000556256 SLC38A6Q8IZM9 456 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 CLEC4FQ8N1N0 589 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 OR2L13Q8N349 312 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 CCDC71LQ8N9Z2 235 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 OR4D9Q8NGE8 314 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 OR56B4Q8NH76 319 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 MRPS31Q92665 395 aaKnown RBP1.97□□□□□ -2.09
SCFD1-218ENST00000556256 NEIL2Q969S2 332 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 COQ2Q96H96 371 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 TGM7Q96PF1 710 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 TBX15Q96SF7 602 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 TUBGCP2Q9BSJ2 902 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 CNPY3Q9BT09 278 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 EDEM2Q9BV94 578 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 SPATA16Q9BXB7 569 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 NXF5Q9H1B4 397 aaKnown RBP1.97□□□□□ -2.09
SCFD1-218ENST00000556256 RAB18Q9NP72 206 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 SLC17A5Q9NRA2 495 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 PLSCR3Q9NRY6 295 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 UFSP2Q9NUQ7 469 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 IL36GQ9NZH8 169 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 RPH3ALQ9UNE2 315 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 ABCG2Q9UNQ0 655 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 POLDIP2Q9Y2S7 368 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 PLLPQ9Y342 182 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 MAD1L1Q9Y6D9 718 aa1.97□□□□□ -2.09
SCFD1-218ENST00000556256 DDX49Q9Y6V7 483 aaKnown RBP1.97□□□□□ -2.09
SCFD1-218ENST00000556256 KIF16BQ96L93 1317 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 A0A0G2JRQ6 117 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 LRP5LA4QPB2 252 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 H0YCG3 227 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 CPLX1O14810 134 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 CXCL13O43927 109 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms