RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 FESP07332 822 aa13.71□□□□□ -0.21
SNX6-205ENST00000555648 CD3EP07766 207 aa13.71□□□□□ -0.21
SNX6-205ENST00000555648 KITP10721 976 aa13.71□□□□□ -0.21
SNX6-205ENST00000555648 UQCRBP14927 111 aa13.71□□□□□ -0.21
SNX6-205ENST00000555648 LOXP28300 417 aaPredicted RBP13.71□□□□□ -0.21
SNX6-205ENST00000555648 PGM1P36871 562 aa13.71□□□□□ -0.21
SNX6-205ENST00000555648 DIO1P49895 249 aa13.71□□□□□ -0.21
SNX6-205ENST00000555648 KCNJ10P78508 379 aa13.71□□□□□ -0.21
SNX6-205ENST00000555648 TSC22D1Q15714 1073 aa13.71□□□□□ -0.21
SNX6-205ENST00000555648 STK11Q15831 433 aa13.71□□□□□ -0.21
SNX6-205ENST00000555648 FRRS1Q6ZNA5 592 aa13.71□□□□□ -0.21
SNX6-205ENST00000555648 BHLHA15Q7RTS1 189 aaPredicted RBP13.71□□□□□ -0.21
SNX6-205ENST00000555648 GRINAQ7Z429 371 aa13.71□□□□□ -0.21
SNX6-205ENST00000555648 GLB1L3Q8NCI6 653 aaPredicted RBP13.71□□□□□ -0.21
SNX6-205ENST00000555648 AKAP1Q92667 903 aaKnown RBP eCLIP13.71□□□□□ -0.21
SNX6-205ENST00000555648 ZNF775Q96BV0 537 aaPredicted RBP13.71□□□□□ -0.21
SNX6-205ENST00000555648 MUCL1Q96DR8 90 aa13.71□□□□□ -0.21
SNX6-205ENST00000555648 PSD2Q9BQI7 771 aa13.71□□□□□ -0.21
SNX6-205ENST00000555648 POTEKPQ9BYX7 375 aa13.71□□□□□ -0.21
SNX6-205ENST00000555648 CACYBPQ9HB71 228 aaKnown RBP13.71□□□□□ -0.21
SNX6-205ENST00000555648 CHRNA9Q9UGM1 479 aa13.71□□□□□ -0.21
SNX6-205ENST00000555648 RNF115Q9Y4L5 304 aa13.71□□□□□ -0.21
SNX6-205ENST00000555648 MTORP42345 2549 aa13.7□□□□□ -0.22
SNX6-205ENST00000555648 ITPR3Q14573 2671 aa13.7□□□□□ -0.22
SNX6-205ENST00000555648 ZNF724A8MTY0 619 aa13.7□□□□□ -0.22
SNX6-205ENST00000555648 SDHDO14521 159 aa13.7□□□□□ -0.22
SNX6-205ENST00000555648 SMAD9O15198 467 aaKnown RBP13.7□□□□□ -0.22
SNX6-205ENST00000555648 DNAJA2O60884 412 aa13.7□□□□□ -0.22
SNX6-205ENST00000555648 TMCC2O75069 709 aa13.7□□□□□ -0.22
SNX6-205ENST00000555648 GCM2O75603 506 aaPredicted RBP13.7□□□□□ -0.22
SNX6-205ENST00000555648 NR2F1P10589 423 aa13.7□□□□□ -0.22
SNX6-205ENST00000555648 CCNA2P20248 432 aa13.7□□□□□ -0.22
SNX6-205ENST00000555648 EPHA3P29320 983 aa13.7□□□□□ -0.22
SNX6-205ENST00000555648 HTR3AP46098 478 aa13.7□□□□□ -0.22
SNX6-205ENST00000555648 OR3A2P47893 321 aa13.7□□□□□ -0.22
SNX6-205ENST00000555648 PTH2RP49190 550 aa13.7□□□□□ -0.22
SNX6-205ENST00000555648 CHRNEQ04844 493 aa13.7□□□□□ -0.22
SNX6-205ENST00000555648 LTBQ06643 244 aa13.7□□□□□ -0.22
SNX6-205ENST00000555648 MAPK14Q16539 360 aa13.7□□□□□ -0.22
SNX6-205ENST00000555648 KRTAP21-3Q3LHN1 58 aa13.7□□□□□ -0.22
SNX6-205ENST00000555648 TNFAIP8L3Q5GJ75 292 aa13.7□□□□□ -0.22
SNX6-205ENST00000555648 Q6ZT83 130 aa13.7□□□□□ -0.22
SNX6-205ENST00000555648 Q71RC1 249 aaPredicted RBP13.7□□□□□ -0.22
SNX6-205ENST00000555648 HMGN2P46Q86SG4 172 aa13.7□□□□□ -0.22
SNX6-205ENST00000555648 MTDHQ86UE4 582 aaKnown RBP13.7□□□□□ -0.22
SNX6-205ENST00000555648 KRTAP1-3Q8IUG1 177 aa13.7□□□□□ -0.22
SNX6-205ENST00000555648 CMIPQ8IY22 773 aa13.7□□□□□ -0.22
SNX6-205ENST00000555648 UBE2J2Q8N2K1 259 aa13.7□□□□□ -0.22
SNX6-205ENST00000555648 ZNF611Q8N823 705 aa13.7□□□□□ -0.22
SNX6-205ENST00000555648 TRNT1Q96Q11 434 aaKnown RBP13.7□□□□□ -0.22
SNX6-205ENST00000555648 GSX2Q9BZM3 304 aa13.7□□□□□ -0.22
SNX6-205ENST00000555648 SAP130Q9H0E3 1048 aa13.7□□□□□ -0.22
SNX6-205ENST00000555648 WDR55Q9H6Y2 383 aaPredicted RBP13.7□□□□□ -0.22
SNX6-205ENST00000555648 EXOSC3Q9NQT5 275 aaKnown RBP13.7□□□□□ -0.22
SNX6-205ENST00000555648 CTPS2Q9NRF8 586 aa13.7□□□□□ -0.22
SNX6-205ENST00000555648 H7C1Q1 480 aa13.69□□□□□ -0.22
SNX6-205ENST00000555648 HMGN4O00479 90 aa13.69□□□□□ -0.22
SNX6-205ENST00000555648 RFXANKO14593 260 aa13.69□□□□□ -0.22
SNX6-205ENST00000555648 SMAD7O15105 426 aaKnown RBP13.69□□□□□ -0.22
SNX6-205ENST00000555648 ANP32DO95626 131 aa13.69□□□□□ -0.22
SNX6-205ENST00000555648 PLAUP00749 431 aa13.69□□□□□ -0.22
SNX6-205ENST00000555648 GSNP06396 782 aa13.69□□□□□ -0.22
SNX6-205ENST00000555648 ALDOCP09972 364 aaKnown RBP13.69□□□□□ -0.22
SNX6-205ENST00000555648 NID1P14543 1247 aa13.69□□□□□ -0.22
SNX6-205ENST00000555648 IDO1P14902 403 aa13.69□□□□□ -0.22
SNX6-205ENST00000555648 IL7RP16871 459 aa13.69□□□□□ -0.22
SNX6-205ENST00000555648 IDH2P48735 452 aaKnown RBP13.69□□□□□ -0.22
SNX6-205ENST00000555648 CLK1P49759 484 aaKnown RBP13.69□□□□□ -0.22
SNX6-205ENST00000555648 ATP5J2P56134 94 aa13.69□□□□□ -0.22
SNX6-205ENST00000555648 OR2B6P58173 313 aa13.69□□□□□ -0.22
SNX6-205ENST00000555648 TAB1Q15750 504 aa13.69□□□□□ -0.22
SNX6-205ENST00000555648 SSX8Q7RTT4 187 aa13.69□□□□□ -0.22
SNX6-205ENST00000555648 FAM71CQ8NEG0 241 aa13.69□□□□□ -0.22
SNX6-205ENST00000555648 PIGXQ8TBF5 258 aa13.69□□□□□ -0.22
SNX6-205ENST00000555648 PNPT1Q8TCS8 783 aaKnown RBP13.69□□□□□ -0.22
SNX6-205ENST00000555648 GTPBP3Q969Y2 492 aaKnown RBP13.69□□□□□ -0.22
SNX6-205ENST00000555648 ZNF524Q96C55 264 aa13.69□□□□□ -0.22
SNX6-205ENST00000555648 TEX37Q96LM6 180 aa13.69□□□□□ -0.22
SNX6-205ENST00000555648 ZNF300Q96RE9 604 aaPredicted RBP13.69□□□□□ -0.22
SNX6-205ENST00000555648 SMR3AQ99954 134 aa13.69□□□□□ -0.22
SNX6-205ENST00000555648 MTHFD2LQ9H903 347 aaPredicted RBP13.69□□□□□ -0.22
SNX6-205ENST00000555648 PRSS50Q9UI38 385 aa13.69□□□□□ -0.22
SNX6-205ENST00000555648 NOSIPQ9Y314 301 aaKnown RBP13.69□□□□□ -0.22
SNX6-205ENST00000555648 HDGFL3Q9Y3E1 203 aa13.69□□□□□ -0.22
SNX6-205ENST00000555648 PCNX3Q9H6A9 2034 aa13.68□□□□□ -0.22
SNX6-205ENST00000555648 TMEM247A6NEH6 219 aa13.68□□□□□ -0.22
SNX6-205ENST00000555648 ZNF814B7Z6K7 855 aa13.68□□□□□ -0.22
SNX6-205ENST00000555648 GPR171O14626 319 aa13.68□□□□□ -0.22
SNX6-205ENST00000555648 SLC22A3O75751 556 aa13.68□□□□□ -0.22
SNX6-205ENST00000555648 LYZL6O75951 148 aa13.68□□□□□ -0.22
SNX6-205ENST00000555648 IL6P05231 212 aa13.68□□□□□ -0.22
SNX6-205ENST00000555648 RPS4XP62701 263 aaKnown RBP13.68□□□□□ -0.22
SNX6-205ENST00000555648 FUT5Q11128 374 aa13.68□□□□□ -0.22
SNX6-205ENST00000555648 SYPL1Q16563 259 aa13.68□□□□□ -0.22
SNX6-205ENST00000555648 LRRC74BQ6ZQY2 392 aa13.68□□□□□ -0.22
SNX6-205ENST00000555648 PEX5LQ8IYB4 626 aa13.68□□□□□ -0.22
SNX6-205ENST00000555648 ANKFN1Q8N957 763 aa13.68□□□□□ -0.22
SNX6-205ENST00000555648 RAB3IL1Q8TBN0 382 aa13.68□□□□□ -0.22
SNX6-205ENST00000555648 WDR60Q8WVS4 1066 aa13.68□□□□□ -0.22
SNX6-205ENST00000555648 FBXW5Q969U6 566 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms