RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 C6orf226Q5I0X4 101 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 TCHHL1Q5QJ38 904 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-211ENST00000554437 MARC1Q5VT66 337 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 TMEM107Q6UX40 140 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 APOOLQ6UXV4 268 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 DPY19L2P2Q6ZN68 376 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 ZNF600Q6ZNG1 722 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 MOB2Q70IA6 237 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 GPR142Q7Z601 462 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 PARGQ86W56 976 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 NAXDQ8IW45 347 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 SLC38A6Q8IZM9 456 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 KLHL30-AS1Q8NEE0 82 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 FAM83FQ8NEG4 500 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-211ENST00000554437 OR13F1Q8NGS4 319 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 GLYATL2Q8WU03 294 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 ZNF707Q96C28 371 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-211ENST00000554437 MSANTD3Q96H12 275 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 ARL5BQ96KC2 179 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 C7orf34Q96L11 122 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 CCT8L2Q96SF2 557 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 RIT2Q99578 217 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 CENPKQ9BS16 269 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 TTYH2Q9BSA4 534 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 ST6GALNAC5Q9BVH7 336 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 TSSK1BQ9BXA7 367 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 ANKRA2Q9H9E1 313 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 PARVGQ9HBI0 331 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.82□□□□□ -1.8
SCFD1-211ENST00000554437 C1orf123Q9NWV4 160 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 TUBGCP4Q9UGJ1 667 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 MLXQ9UH92 298 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 CIDEBQ9UHD4 219 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 EMCNQ9ULC0 261 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 TBC1D24Q9ULP9 559 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 VSIG4Q9Y279 399 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 GSTK1Q9Y2Q3 226 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 C15orf41Q9Y2V0 281 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 NPTNQ9Y639 398 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 BZW2Q9Y6E2 419 aaKnown RBP3.82□□□□□ -1.8
SCFD1-211ENST00000554437 CCDC7Q96M83 1385 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 A0A0J9YYE9 177 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 ERICH2A1L162 156 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 WASHC1A8K0Z3 465 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 NBR2O15453 112 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 RRP8O43159 456 aaKnown RBP3.81□□□□□ -1.8
SCFD1-211ENST00000554437 STK17BO94768 372 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 TGM6O95932 706 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 TRBC1P01850 177 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 APOA1P02647 267 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 MCF2P10911 925 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 UMPSP11172 480 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 NCK1P16333 377 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 TUBG1P23258 451 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 NAMPTP43490 491 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 HTR5AP47898 357 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 NDST1P52848 882 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 PLA2G16P53816 162 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 OSTNP61366 133 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 YWHAGP61981 247 aaKnown RBP eCLIP3.81□□□□□ -1.8
SCFD1-211ENST00000554437 PPIL2Q13356 520 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 TGFBIQ15582 683 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 HAGHQ16775 308 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 ACER2Q5QJU3 275 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 PDZK1Q5T2W1 519 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 FAM219BQ5XKK7 198 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 OR2A2Q6IF42 318 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 TMEM53Q6P2H8 277 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 DEGS2Q6QHC5 323 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 CCDC80Q76M96 950 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 SH2D6Q7Z4S9 175 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 KIAA1328Q86T90 577 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 LINC00523Q86TU6 105 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 TPRA1Q86W33 373 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 MICU2Q8IYU8 434 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 GTPBP8Q8N3Z3 284 aaPredicted RBP3.81□□□□□ -1.8
SCFD1-211ENST00000554437 NFAM1Q8NET5 270 aaPredicted RBP3.81□□□□□ -1.8
SCFD1-211ENST00000554437 OR1L4Q8NGR5 311 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 LKAAEAR1Q8TD35 194 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 GPX8Q8TED1 209 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 SCFD1Q8WVM8 642 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 PIBF1Q8WXW3 757 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 ST8SIA1Q92185 356 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 FAM3CQ92520 227 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 BIRC7Q96CA5 298 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 SERAC1Q96JX3 654 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 ZNF396Q96N95 335 aaPredicted RBP3.81□□□□□ -1.8
SCFD1-211ENST00000554437 CATSPER2Q96P56 530 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 TECTBQ96PL2 329 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 SPACA1Q9HBV2 294 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 ADGRL4Q9HBW9 690 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 TUBG2Q9NRH3 451 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 RSPH14Q9UHP6 348 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 IKZF3Q9UKT9 509 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 RNF6Q9Y252 685 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 FKBP7Q9Y680 259 aa3.81□□□□□ -1.8
SCFD1-211ENST00000554437 PTPRUQ92729 1446 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 PPIAL4EA0A075B759 164 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 A0A1W2PQ72 361 aa3.8□□□□□ -1.8
SCFD1-211ENST00000554437 SMCO3A2RU48 225 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms