RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 GTPBP3Q969Y2 492 aaKnown RBP16.62■□□□□ 0.25
CPSF2-203ENST00000554290 ROPN1LQ96C74 230 aa16.62■□□□□ 0.25
CPSF2-203ENST00000554290 ZHX1-C8orf76Q96EF9 292 aa16.62■□□□□ 0.25
CPSF2-203ENST00000554290 ZNF300Q96RE9 604 aaPredicted RBP16.62■□□□□ 0.25
CPSF2-203ENST00000554290 SSU72Q9NP77 194 aaKnown RBP16.62■□□□□ 0.25
CPSF2-203ENST00000554290 PRSS50Q9UI38 385 aa16.62■□□□□ 0.25
CPSF2-203ENST00000554290 ROS1P08922 2347 aa16.61■□□□□ 0.25
CPSF2-203ENST00000554290 A0A1W2PP18 115 aa16.61■□□□□ 0.25
CPSF2-203ENST00000554290 OVOL3O00110 214 aa16.61■□□□□ 0.25
CPSF2-203ENST00000554290 TM9SF1O15321 606 aa16.61■□□□□ 0.25
CPSF2-203ENST00000554290 SCN2BO60939 215 aa16.61■□□□□ 0.25
CPSF2-203ENST00000554290 DANCRP0C864 163 aa16.61■□□□□ 0.25
CPSF2-203ENST00000554290 IDUAP35475 653 aa16.61■□□□□ 0.25
CPSF2-203ENST00000554290 CHI3L1P36222 383 aaPredicted RBP16.61■□□□□ 0.25
CPSF2-203ENST00000554290 PGM1P36871 562 aa16.61■□□□□ 0.25
CPSF2-203ENST00000554290 SLC1A6P48664 564 aa16.61■□□□□ 0.25
CPSF2-203ENST00000554290 KHKP50053 298 aa16.61■□□□□ 0.25
CPSF2-203ENST00000554290 CLNS1AP54105 237 aaKnown RBP16.61■□□□□ 0.25
CPSF2-203ENST00000554290 HPCAP84074 193 aa16.61■□□□□ 0.25
CPSF2-203ENST00000554290 BSPH1Q075Z2 132 aa16.61■□□□□ 0.25
CPSF2-203ENST00000554290 TNK1Q13470 666 aa16.61■□□□□ 0.25
CPSF2-203ENST00000554290 PPA1Q15181 289 aa16.61■□□□□ 0.25
CPSF2-203ENST00000554290 STK11Q15831 433 aa16.61■□□□□ 0.25
CPSF2-203ENST00000554290 MAPK14Q16539 360 aa16.61■□□□□ 0.25
CPSF2-203ENST00000554290 CLEC12BQ2HXU8 276 aa16.61■□□□□ 0.25
CPSF2-203ENST00000554290 AP1ARQ63HQ0 302 aa16.61■□□□□ 0.25
CPSF2-203ENST00000554290 TYW3Q6IPR3 259 aaKnown RBP16.61■□□□□ 0.25
CPSF2-203ENST00000554290 TNFAIP8L2Q6P589 184 aaPredicted RBP16.61■□□□□ 0.25
CPSF2-203ENST00000554290 P2RY8Q86VZ1 359 aa16.61■□□□□ 0.25
CPSF2-203ENST00000554290 LRRC34Q8IZ02 419 aa16.61■□□□□ 0.25
CPSF2-203ENST00000554290 ZNF75CPQ92670 426 aaPredicted RBP16.61■□□□□ 0.25
CPSF2-203ENST00000554290 RAB8BQ92930 207 aa16.61■□□□□ 0.25
CPSF2-203ENST00000554290 SAP130Q9H0E3 1048 aa16.61■□□□□ 0.25
CPSF2-203ENST00000554290 DPRXA6NFQ7 191 aa16.6■□□□□ 0.25
CPSF2-203ENST00000554290 SOD3P08294 240 aa16.6■□□□□ 0.25
CPSF2-203ENST00000554290 LBPP18428 481 aa16.6■□□□□ 0.25
CPSF2-203ENST00000554290 GGT1P19440 569 aa16.6■□□□□ 0.25
CPSF2-203ENST00000554290 RYKP34925 604 aa16.6■□□□□ 0.25
CPSF2-203ENST00000554290 VEZF1Q14119 521 aa16.6■□□□□ 0.25
CPSF2-203ENST00000554290 CASP8Q14790 479 aa16.6■□□□□ 0.25
CPSF2-203ENST00000554290 PDK3Q15120 406 aa16.6■□□□□ 0.25
CPSF2-203ENST00000554290 GPAT3Q53EU6 434 aa16.6■□□□□ 0.25
CPSF2-203ENST00000554290 TIMM23BQ5SRD1 257 aa16.6■□□□□ 0.25
CPSF2-203ENST00000554290 SAXO2Q658L1 398 aa16.6■□□□□ 0.25
CPSF2-203ENST00000554290 MREGQ8N565 214 aa16.6■□□□□ 0.25
CPSF2-203ENST00000554290 ARFGAP2Q8N6H7 521 aa16.6■□□□□ 0.25
CPSF2-203ENST00000554290 FAM71CQ8NEG0 241 aa16.6■□□□□ 0.25
CPSF2-203ENST00000554290 NEURL3Q96EH8 262 aa16.6■□□□□ 0.25
CPSF2-203ENST00000554290 CCDC106Q9BWC9 280 aa16.6■□□□□ 0.25
CPSF2-203ENST00000554290 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.6■□□□□ 0.25
CPSF2-203ENST00000554290 MARCOQ9UEW3 520 aaPredicted RBP16.6■□□□□ 0.25
CPSF2-203ENST00000554290 CHRNA9Q9UGM1 479 aa16.6■□□□□ 0.25
CPSF2-203ENST00000554290 LIPT1Q9Y234 373 aa16.6■□□□□ 0.25
CPSF2-203ENST00000554290 NUP214P35658 2090 aaPredicted RBP16.6■□□□□ 0.25
CPSF2-203ENST00000554290 IGKV3D-15A0A087WSY6 115 aa16.59■□□□□ 0.25
CPSF2-203ENST00000554290 INAFM1C9JVW0 142 aa16.59■□□□□ 0.25
CPSF2-203ENST00000554290 GPR171O14626 319 aa16.59■□□□□ 0.25
CPSF2-203ENST00000554290 COX5AP20674 150 aa16.59■□□□□ 0.25
CPSF2-203ENST00000554290 S100A3P33764 101 aa16.59■□□□□ 0.25
CPSF2-203ENST00000554290 CLK1P49759 484 aaKnown RBP16.59■□□□□ 0.25
CPSF2-203ENST00000554290 PHC1P78364 1004 aa16.59■□□□□ 0.25
CPSF2-203ENST00000554290 KCNJ10P78508 379 aa16.59■□□□□ 0.25
CPSF2-203ENST00000554290 SPANXN4Q5MJ08 99 aa16.59■□□□□ 0.25
CPSF2-203ENST00000554290 FBXW9Q5XUX1 488 aa16.59■□□□□ 0.25
CPSF2-203ENST00000554290 ABLIM2Q6H8Q1 611 aa16.59■□□□□ 0.25
CPSF2-203ENST00000554290 SEZ6L2Q6UXD5 910 aa16.59■□□□□ 0.25
CPSF2-203ENST00000554290 FRRS1Q6ZNA5 592 aa16.59■□□□□ 0.25
CPSF2-203ENST00000554290 GRINAQ7Z429 371 aa16.59■□□□□ 0.25
CPSF2-203ENST00000554290 UBE2J2Q8N2K1 259 aa16.59■□□□□ 0.25
CPSF2-203ENST00000554290 TRIML2Q8N7C3 387 aa16.59■□□□□ 0.25
CPSF2-203ENST00000554290 KBTBD8Q8NFY9 601 aa16.59■□□□□ 0.25
CPSF2-203ENST00000554290 NEUROG1Q92886 237 aa16.59■□□□□ 0.25
CPSF2-203ENST00000554290 SORT1Q99523 831 aa16.59■□□□□ 0.25
CPSF2-203ENST00000554290 SLC35A5Q9BS91 424 aa16.59■□□□□ 0.25
CPSF2-203ENST00000554290 NUF2Q9BZD4 464 aa16.59■□□□□ 0.25
CPSF2-203ENST00000554290 TRIM2Q9C040 744 aa16.59■□□□□ 0.25
CPSF2-203ENST00000554290 C20orf27Q9GZN8 174 aa16.59■□□□□ 0.25
CPSF2-203ENST00000554290 EXOSC3Q9NQT5 275 aaKnown RBP16.59■□□□□ 0.25
CPSF2-203ENST00000554290 CTPS2Q9NRF8 586 aa16.59■□□□□ 0.25
CPSF2-203ENST00000554290 FAIMQ9NVQ4 179 aa16.59■□□□□ 0.25
CPSF2-203ENST00000554290 NOSIPQ9Y314 301 aaKnown RBP16.59■□□□□ 0.25
CPSF2-203ENST00000554290 HDGFL3Q9Y3E1 203 aa16.59■□□□□ 0.25
CPSF2-203ENST00000554290 FN1P02751 2386 aaKnown RBP16.59■□□□□ 0.25
CPSF2-203ENST00000554290 OR5H1A6NKK0 313 aa16.58■□□□□ 0.24
CPSF2-203ENST00000554290 E9PBE3 544 aa16.58■□□□□ 0.24
CPSF2-203ENST00000554290 DNPH1O43598 174 aa16.58■□□□□ 0.24
CPSF2-203ENST00000554290 PMS2P2O95744 297 aa16.58■□□□□ 0.24
CPSF2-203ENST00000554290 DHRS4L1P0CG22 281 aa16.58■□□□□ 0.24
CPSF2-203ENST00000554290 IGHV1-2P23083 117 aa16.58■□□□□ 0.24
CPSF2-203ENST00000554290 HTR3AP46098 478 aa16.58■□□□□ 0.24
CPSF2-203ENST00000554290 ANXA11P50995 505 aaKnown RBP16.58■□□□□ 0.24
CPSF2-203ENST00000554290 STX3Q13277 289 aa16.58■□□□□ 0.24
CPSF2-203ENST00000554290 FAM174BQ3ZCQ3 159 aa16.58■□□□□ 0.24
CPSF2-203ENST00000554290 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.58■□□□□ 0.24
CPSF2-203ENST00000554290 ATG4DQ86TL0 474 aaPredicted RBP16.58■□□□□ 0.24
CPSF2-203ENST00000554290 PIGXQ8TBF5 258 aa16.58■□□□□ 0.24
CPSF2-203ENST00000554290 APH1AQ96BI3 265 aa16.58■□□□□ 0.24
CPSF2-203ENST00000554290 ZG16BQ96DA0 208 aa16.58■□□□□ 0.24
CPSF2-203ENST00000554290 RADILQ96JH8 1075 aa16.58■□□□□ 0.24
CPSF2-203ENST00000554290 CENPHQ9H3R5 247 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms