RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 SORT1Q99523 831 aa5.8□□□□□ -1.48
FOXN3-205ENST00000553904 NPAS1Q99742 590 aa5.8□□□□□ -1.48
FOXN3-205ENST00000553904 GSX2Q9BZM3 304 aa5.8□□□□□ -1.48
FOXN3-205ENST00000553904 C20orf27Q9GZN8 174 aa5.8□□□□□ -1.48
FOXN3-205ENST00000553904 RAD21L1Q9H4I0 556 aa5.8□□□□□ -1.48
FOXN3-205ENST00000553904 PNPOQ9NVS9 261 aa5.8□□□□□ -1.48
FOXN3-205ENST00000553904 ASB6Q9NWX5 421 aa5.8□□□□□ -1.48
FOXN3-205ENST00000553904 MGAT4BQ9UQ53 548 aa5.8□□□□□ -1.48
FOXN3-205ENST00000553904 NOSIPQ9Y314 301 aaKnown RBP5.8□□□□□ -1.48
FOXN3-205ENST00000553904 IFT52Q9Y366 437 aa5.8□□□□□ -1.48
FOXN3-205ENST00000553904 RNF115Q9Y4L5 304 aa5.8□□□□□ -1.48
FOXN3-205ENST00000553904 CACNA1CQ13936 2221 aa5.8□□□□□ -1.48
FOXN3-205ENST00000553904 ARHGAP21Q5T5U3 1957 aa5.8□□□□□ -1.48
FOXN3-205ENST00000553904 NCKAP5O14513 1909 aa5.8□□□□□ -1.48
FOXN3-205ENST00000553904 INTS1Q8N201 2190 aaKnown RBP5.79□□□□□ -1.48
FOXN3-205ENST00000553904 A0A1W2PNR3 127 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 CIB4A0PJX0 185 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 CFAP73A6NFT4 308 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 AGAP5A6NIR3 686 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 CCT8L1PA6NM43 557 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 HMGN4O00479 90 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 FAAHO00519 579 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 UBDO15205 165 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 ZNF208O43345 1280 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 KIAA0513O60268 411 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 DIAPH2O60879 1101 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 GCM2O75603 506 aaPredicted RBP5.79□□□□□ -1.48
FOXN3-205ENST00000553904 TGDSO95455 350 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 H6PDO95479 791 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 THBDP07204 575 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 ZCCHC18P0CG32 403 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 KITP10721 976 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 NID1P14543 1247 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 PAX1P15863 534 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 CXCR1P25024 350 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 EPHA3P29320 983 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 SHC1P29353 583 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 IDUAP35475 653 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 SLC1A3P43003 542 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 CRATP43155 626 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 IDH2P48735 452 aaKnown RBP5.79□□□□□ -1.48
FOXN3-205ENST00000553904 POLR2HP52434 150 aaKnown RBP5.79□□□□□ -1.48
FOXN3-205ENST00000553904 CRISP3P54108 245 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 ATP5J2P56134 94 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 OR2B6P58173 313 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 MAGOHP61326 146 aaKnown RBP5.79□□□□□ -1.48
FOXN3-205ENST00000553904 UFM1P61960 85 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 PHC1P78364 1004 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 IRX1P78414 480 aaPredicted RBP5.79□□□□□ -1.48
FOXN3-205ENST00000553904 CHRNEQ04844 493 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 MPP2Q14168 576 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 PPA1Q15181 289 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 TAB1Q15750 504 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 NDUFAF6Q330K2 333 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 PDCD4Q53EL6 469 aaKnown RBP5.79□□□□□ -1.48
FOXN3-205ENST00000553904 Q5PR19 223 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 TIMM23BQ5SRD1 257 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 NCMAPQ5T1S8 102 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 TMEM225Q6GV28 225 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 KLHL17Q6TDP4 642 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 TMEM108Q6UXF1 575 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 TFAP2EQ6VUC0 442 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 MSANTD1Q6ZTZ1 278 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 BHLHA15Q7RTS1 189 aaPredicted RBP5.79□□□□□ -1.48
FOXN3-205ENST00000553904 ABHD12BQ7Z5M8 362 aaPredicted RBP5.79□□□□□ -1.48
FOXN3-205ENST00000553904 YTHDF3Q7Z739 585 aaKnown RBP5.79□□□□□ -1.48
FOXN3-205ENST00000553904 RNF130Q86XS8 419 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 GABRG1Q8N1C3 465 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 CLEC4FQ8N1N0 589 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 NUDT8Q8WV74 236 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 WDR60Q8WVS4 1066 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 AKAP1Q92667 903 aaKnown RBP eCLIP5.79□□□□□ -1.48
FOXN3-205ENST00000553904 FBXW5Q969U6 566 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 APH1AQ96BI3 265 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 PERPQ96FX8 193 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 MARK4Q96L34 752 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 PSD2Q9BQI7 771 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 CCDC106Q9BWC9 280 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 SRXN1Q9BYN0 137 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 POTEKPQ9BYX7 375 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 QRSL1Q9H0R6 528 aaKnown RBP5.79□□□□□ -1.48
FOXN3-205ENST00000553904 ALG2Q9H553 416 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 PIF1Q9H611 641 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 DLL4Q9NR61 685 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 CTPS2Q9NRF8 586 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 AIG1Q9NVV5 245 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 ZIM2Q9NZV7 527 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 TMEM181Q9P2C4 612 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 P2RX2Q9UBL9 471 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 UPB1Q9UBR1 384 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 KCNE5Q9UJ90 142 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 GPR45Q9Y5Y3 372 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 APCP25054 2843 aa5.79□□□□□ -1.48
FOXN3-205ENST00000553904 IGKV3D-15A0A087WSY6 115 aa5.78□□□□□ -1.48
FOXN3-205ENST00000553904 A0A096LPI6 279 aa5.78□□□□□ -1.48
FOXN3-205ENST00000553904 TMED7-TICAM2A0A0A6YYA0 188 aa5.78□□□□□ -1.48
FOXN3-205ENST00000553904 IGHV3-15A0A0B4J1V0 119 aa5.78□□□□□ -1.48
FOXN3-205ENST00000553904 A0A0G2JPF8 293 aa5.78□□□□□ -1.48
FOXN3-205ENST00000553904 GOLGA8QA0A0J9YX86 632 aa5.78□□□□□ -1.48
FOXN3-205ENST00000553904 A0A1W2PP18 115 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms