RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 SMYD3Q9H7B4 428 aa3.73□□□□□ -1.81
SYNE2-210ENST00000553455 POPDC2Q9HBU9 364 aa3.73□□□□□ -1.81
SYNE2-210ENST00000553455 NANSQ9NR45 359 aa3.73□□□□□ -1.81
SYNE2-210ENST00000553455 PRR34Q9NV39 138 aa3.73□□□□□ -1.81
SYNE2-210ENST00000553455 UBQLN1Q9UMX0 589 aaKnown RBP3.73□□□□□ -1.81
SYNE2-210ENST00000553455 PLLPQ9Y342 182 aa3.73□□□□□ -1.81
SYNE2-210ENST00000553455 ASB3Q9Y575 518 aa3.73□□□□□ -1.81
SYNE2-210ENST00000553455 IGLV3-10A0A075B6K4 115 aa3.72□□□□□ -1.81
SYNE2-210ENST00000553455 IGHV7-81A0A0B4J1V7 117 aa3.72□□□□□ -1.81
SYNE2-210ENST00000553455 EPOPA6NHQ4 379 aa3.72□□□□□ -1.81
SYNE2-210ENST00000553455 F5H6K3 240 aa3.72□□□□□ -1.81
SYNE2-210ENST00000553455 ZNF208O43345 1280 aa3.72□□□□□ -1.81
SYNE2-210ENST00000553455 OR10H3O60404 316 aa3.72□□□□□ -1.81
SYNE2-210ENST00000553455 SLITRK3O94933 977 aa3.72□□□□□ -1.81
SYNE2-210ENST00000553455 LYPD3O95274 346 aa3.72□□□□□ -1.81
SYNE2-210ENST00000553455 HSPB1P04792 205 aaKnown RBP3.72□□□□□ -1.81
SYNE2-210ENST00000553455 NCK1P16333 377 aa3.72□□□□□ -1.81
SYNE2-210ENST00000553455 PTGDSP41222 190 aa3.72□□□□□ -1.81
SYNE2-210ENST00000553455 MAP3K8P41279 467 aa3.72□□□□□ -1.81
SYNE2-210ENST00000553455 OR3A4PP47883 348 aa3.72□□□□□ -1.81
SYNE2-210ENST00000553455 TDO2P48775 406 aa3.72□□□□□ -1.81
SYNE2-210ENST00000553455 CCT3P49368 545 aaKnown RBP3.72□□□□□ -1.81
SYNE2-210ENST00000553455 DAP3P51398 398 aaKnown RBP3.72□□□□□ -1.81
SYNE2-210ENST00000553455 P2RY4P51582 365 aa3.72□□□□□ -1.81
SYNE2-210ENST00000553455 HNRNPA3P51991 378 aaKnown RBP3.72□□□□□ -1.81
SYNE2-210ENST00000553455 AIF1P55008 147 aa3.72□□□□□ -1.81
SYNE2-210ENST00000553455 KLRC3Q07444 240 aa3.72□□□□□ -1.81
SYNE2-210ENST00000553455 SFT2D3Q587I9 215 aa3.72□□□□□ -1.81
SYNE2-210ENST00000553455 GPRC6AQ5T6X5 926 aa3.72□□□□□ -1.81
SYNE2-210ENST00000553455 OR4F3Q6IEY1 312 aa3.72□□□□□ -1.81
SYNE2-210ENST00000553455 CCDC137Q6PK04 289 aaKnown RBP3.72□□□□□ -1.81
SYNE2-210ENST00000553455 TFAP2EQ6VUC0 442 aa3.72□□□□□ -1.81
SYNE2-210ENST00000553455 PPP1R27Q86WC6 154 aa3.72□□□□□ -1.81
SYNE2-210ENST00000553455 ZBED8Q8IZ13 594 aa3.72□□□□□ -1.81
SYNE2-210ENST00000553455 LRRC75A-AS1Q8N1F1 130 aa3.72□□□□□ -1.81
SYNE2-210ENST00000553455 MTURNQ8N3F0 131 aa3.72□□□□□ -1.81
SYNE2-210ENST00000553455 MFSD9Q8NBP5 474 aa3.72□□□□□ -1.81
SYNE2-210ENST00000553455 ZNF564Q8TBZ8 553 aaPredicted RBP3.72□□□□□ -1.81
SYNE2-210ENST00000553455 SHC3Q92529 594 aa3.72□□□□□ -1.81
SYNE2-210ENST00000553455 MRPS31Q92665 395 aaKnown RBP3.72□□□□□ -1.81
SYNE2-210ENST00000553455 FAM122AQ96E09 287 aa3.72□□□□□ -1.81
SYNE2-210ENST00000553455 CCNL2Q96S94 520 aaPredicted RBP3.72□□□□□ -1.81
SYNE2-210ENST00000553455 LRRC40Q9H9A6 602 aa3.72□□□□□ -1.81
SYNE2-210ENST00000553455 PHF11Q9UIL8 331 aa3.72□□□□□ -1.81
SYNE2-210ENST00000553455 ZFP92A6NM28 416 aa3.71□□□□□ -1.82
SYNE2-210ENST00000553455 TRDCB7Z8K6 153 aa3.71□□□□□ -1.82
SYNE2-210ENST00000553455 E7ESA3 106 aa3.71□□□□□ -1.82
SYNE2-210ENST00000553455 TNFSF11O14788 317 aa3.71□□□□□ -1.82
SYNE2-210ENST00000553455 PRKAB2O43741 272 aa3.71□□□□□ -1.82
SYNE2-210ENST00000553455 TBL1XO60907 577 aa3.71□□□□□ -1.82
SYNE2-210ENST00000553455 ECI2O75521 394 aa3.71□□□□□ -1.82
SYNE2-210ENST00000553455 LALBAP00709 142 aa3.71□□□□□ -1.82
SYNE2-210ENST00000553455 IGHV3-48P01763 117 aa3.71□□□□□ -1.82
SYNE2-210ENST00000553455 POU2F1P14859 743 aa3.71□□□□□ -1.82
SYNE2-210ENST00000553455 KLK2P20151 261 aa3.71□□□□□ -1.82
SYNE2-210ENST00000553455 HOXD10P28358 340 aa3.71□□□□□ -1.82
SYNE2-210ENST00000553455 YWHABP31946 246 aaKnown RBP3.71□□□□□ -1.82
SYNE2-210ENST00000553455 HLCSP50747 726 aa3.71□□□□□ -1.82
SYNE2-210ENST00000553455 DIO3P55073 304 aa3.71□□□□□ -1.82
SYNE2-210ENST00000553455 FGL1Q08830 312 aa3.71□□□□□ -1.82
SYNE2-210ENST00000553455 SLC10A7Q0GE19 358 aa3.71□□□□□ -1.82
SYNE2-210ENST00000553455 KLRB1Q12918 225 aa3.71□□□□□ -1.82
SYNE2-210ENST00000553455 RIPK1Q13546 671 aa3.71□□□□□ -1.82
SYNE2-210ENST00000553455 GRB7Q14451 532 aa3.71□□□□□ -1.82
SYNE2-210ENST00000553455 ISXQ2M1V0 245 aa3.71□□□□□ -1.82
SYNE2-210ENST00000553455 RNF212Q495C1 297 aa3.71□□□□□ -1.82
SYNE2-210ENST00000553455 C1orf220Q5T0J3 134 aa3.71□□□□□ -1.82
SYNE2-210ENST00000553455 PDZK1Q5T2W1 519 aa3.71□□□□□ -1.82
SYNE2-210ENST00000553455 ATL3Q6DD88 541 aa3.71□□□□□ -1.82
SYNE2-210ENST00000553455 LCA5Q86VQ0 697 aa3.71□□□□□ -1.82
SYNE2-210ENST00000553455 SLC35F2Q8IXU6 374 aa3.71□□□□□ -1.82
SYNE2-210ENST00000553455 OR10H4Q8NGA5 316 aa3.71□□□□□ -1.82
SYNE2-210ENST00000553455 TCTEX1D2Q8WW35 142 aa3.71□□□□□ -1.82
SYNE2-210ENST00000553455 PARD6BQ9BYG5 372 aa3.71□□□□□ -1.82
SYNE2-210ENST00000553455 CDH9Q9ULB4 789 aa3.71□□□□□ -1.82
SYNE2-210ENST00000553455 PNPLA6Q8IY17 1366 aa3.71□□□□□ -1.82
SYNE2-210ENST00000553455 TP53BP1Q12888 1972 aaPredicted RBP3.71□□□□□ -1.82
SYNE2-210ENST00000553455 NOTCH3Q9UM47 2321 aa3.7□□□□□ -1.82
SYNE2-210ENST00000553455 SYNJ2BP-COX16A0A087WUM0 186 aa3.7□□□□□ -1.82
SYNE2-210ENST00000553455 A0A1B0GUS0 222 aa3.7□□□□□ -1.82
SYNE2-210ENST00000553455 MPHOSPH10O00566 681 aaKnown RBP3.7□□□□□ -1.82
SYNE2-210ENST00000553455 NBR2O15453 112 aa3.7□□□□□ -1.82
SYNE2-210ENST00000553455 SCGNO76038 276 aa3.7□□□□□ -1.82
SYNE2-210ENST00000553455 IGKV3-15P01624 115 aa3.7□□□□□ -1.82
SYNE2-210ENST00000553455 OPN1MWP04001 364 aa3.7□□□□□ -1.82
SYNE2-210ENST00000553455 LGALS2P05162 132 aa3.7□□□□□ -1.82
SYNE2-210ENST00000553455 OPN1MW2P0DN77 364 aa3.7□□□□□ -1.82
SYNE2-210ENST00000553455 OPN1MW3P0DN78 364 aa3.7□□□□□ -1.82
SYNE2-210ENST00000553455 DBTP11182 482 aaKnown RBP3.7□□□□□ -1.82
SYNE2-210ENST00000553455 RNH1P13489 461 aaKnown RBP3.7□□□□□ -1.82
SYNE2-210ENST00000553455 GCAP28676 217 aa3.7□□□□□ -1.82
SYNE2-210ENST00000553455 TNFRSF17Q02223 184 aa3.7□□□□□ -1.82
SYNE2-210ENST00000553455 CHRNB3Q05901 458 aa3.7□□□□□ -1.82
SYNE2-210ENST00000553455 ZNF544Q6NX49 715 aa3.7□□□□□ -1.82
SYNE2-210ENST00000553455 DNM1P46Q6ZS02 220 aa3.7□□□□□ -1.82
SYNE2-210ENST00000553455 HSD17B13Q7Z5P4 300 aaPredicted RBP3.7□□□□□ -1.82
SYNE2-210ENST00000553455 ZNF589Q86UQ0 364 aaPredicted RBP3.7□□□□□ -1.82
SYNE2-210ENST00000553455 SLC38A2Q96QD8 506 aa3.7□□□□□ -1.82
SYNE2-210ENST00000553455 ZBTB18Q99592 522 aa3.7□□□□□ -1.82
SYNE2-210ENST00000553455 EHD1Q9H4M9 534 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms