RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 VSTM5A8MXK1 200 aa10.7□□□□□ -0.7
SNRPF-204ENST00000552085 STX16-NPEPL1H3BU86 382 aa10.7□□□□□ -0.7
SNRPF-204ENST00000552085 KIF2AO00139 706 aaPredicted RBP10.7□□□□□ -0.7
SNRPF-204ENST00000552085 PDLIM1O00151 329 aa10.7□□□□□ -0.7
SNRPF-204ENST00000552085 STX16O14662 325 aa10.7□□□□□ -0.7
SNRPF-204ENST00000552085 PPIHO43447 177 aaKnown RBP10.7□□□□□ -0.7
SNRPF-204ENST00000552085 PSMG1O95456 288 aa10.7□□□□□ -0.7
SNRPF-204ENST00000552085 ESRRBO95718 433 aa10.7□□□□□ -0.7
SNRPF-204ENST00000552085 PDYNP01213 254 aa10.7□□□□□ -0.7
SNRPF-204ENST00000552085 NGFRP08138 427 aa10.7□□□□□ -0.7
SNRPF-204ENST00000552085 HSD3B1P14060 373 aa10.7□□□□□ -0.7
SNRPF-204ENST00000552085 TCP1P17987 556 aaKnown RBP10.7□□□□□ -0.7
SNRPF-204ENST00000552085 NPR2P20594 1047 aa10.7□□□□□ -0.7
SNRPF-204ENST00000552085 HSD3B2P26439 372 aa10.7□□□□□ -0.7
SNRPF-204ENST00000552085 SLC7A1P30825 629 aa10.7□□□□□ -0.7
SNRPF-204ENST00000552085 KRTAP10-3P60369 221 aa10.7□□□□□ -0.7
SNRPF-204ENST00000552085 HEPACAMQ14CZ8 416 aa10.7□□□□□ -0.7
SNRPF-204ENST00000552085 SAMD5Q5TGI4 173 aa10.7□□□□□ -0.7
SNRPF-204ENST00000552085 GALNT18Q6P9A2 607 aa10.7□□□□□ -0.7
SNRPF-204ENST00000552085 C16orf87Q6PH81 154 aa10.7□□□□□ -0.7
SNRPF-204ENST00000552085 KLHL24Q6TFL4 600 aa10.7□□□□□ -0.7
SNRPF-204ENST00000552085 KLHL7Q8IXQ5 586 aa10.7□□□□□ -0.7
SNRPF-204ENST00000552085 CDK20Q8IZL9 346 aa10.7□□□□□ -0.7
SNRPF-204ENST00000552085 BCL6BQ8N143 479 aaPredicted RBP10.7□□□□□ -0.7
SNRPF-204ENST00000552085 C1orf52Q8N6N3 182 aaKnown RBP10.7□□□□□ -0.7
SNRPF-204ENST00000552085 OR4F6Q8NGB9 312 aa10.7□□□□□ -0.7
SNRPF-204ENST00000552085 OR52E4Q8NGH9 312 aa10.7□□□□□ -0.7
SNRPF-204ENST00000552085 SELENOMQ8WWX9 145 aa10.7□□□□□ -0.7
SNRPF-204ENST00000552085 GTF3AQ92664 365 aaKnown RBP10.7□□□□□ -0.7
SNRPF-204ENST00000552085 RDH5Q92781 318 aa10.7□□□□□ -0.7
SNRPF-204ENST00000552085 WWC2-AS2Q96NR7 200 aa10.7□□□□□ -0.7
SNRPF-204ENST00000552085 SLC38A2Q96QD8 506 aa10.7□□□□□ -0.7
SNRPF-204ENST00000552085 ZNF442Q9H7R0 627 aa10.7□□□□□ -0.7
SNRPF-204ENST00000552085 C3orf14Q9HBI5 128 aa10.7□□□□□ -0.7
SNRPF-204ENST00000552085 ZNF275Q9NSD4 429 aaPredicted RBP10.7□□□□□ -0.7
SNRPF-204ENST00000552085 FARSBQ9NSD9 589 aaKnown RBP10.7□□□□□ -0.7
SNRPF-204ENST00000552085 CPSF2Q9P2I0 782 aaKnown RBP10.7□□□□□ -0.7
SNRPF-204ENST00000552085 DCTN4Q9UJW0 460 aa10.7□□□□□ -0.7
SNRPF-204ENST00000552085 NUP50Q9UKX7 468 aa10.7□□□□□ -0.7
SNRPF-204ENST00000552085 NFU1Q9UMS0 254 aa10.7□□□□□ -0.7
SNRPF-204ENST00000552085 C19orf53Q9UNZ5 99 aaPredicted RBP10.7□□□□□ -0.7
SNRPF-204ENST00000552085 IGKV3D-15A0A087WSY6 115 aa10.69□□□□□ -0.7
SNRPF-204ENST00000552085 TTC36A6NLP5 189 aa10.69□□□□□ -0.7
SNRPF-204ENST00000552085 MYO1GB0I1T2 1018 aa10.69□□□□□ -0.7
SNRPF-204ENST00000552085 KLF11O14901 512 aa10.69□□□□□ -0.7
SNRPF-204ENST00000552085 OXSR1O95747 527 aaPredicted RBP10.69□□□□□ -0.7
SNRPF-204ENST00000552085 OTCP00480 354 aa10.69□□□□□ -0.7
SNRPF-204ENST00000552085 IL3P08700 152 aa10.69□□□□□ -0.7
SNRPF-204ENST00000552085 THBS4P35443 961 aa10.69□□□□□ -0.7
SNRPF-204ENST00000552085 GSTM5P46439 218 aa10.69□□□□□ -0.7
SNRPF-204ENST00000552085 RAG2P55895 527 aa10.69□□□□□ -0.7
SNRPF-204ENST00000552085 HLXQ14774 488 aaPredicted RBP10.69□□□□□ -0.7
SNRPF-204ENST00000552085 SGO1Q5FBB7 561 aa10.69□□□□□ -0.7
SNRPF-204ENST00000552085 SYT10Q6XYQ8 523 aa10.69□□□□□ -0.7
SNRPF-204ENST00000552085 SLC35F6Q8N357 371 aa10.69□□□□□ -0.7
SNRPF-204ENST00000552085 PTGR2Q8N8N7 351 aaPredicted RBP10.69□□□□□ -0.7
SNRPF-204ENST00000552085 NUP37Q8NFH4 326 aa10.69□□□□□ -0.7
SNRPF-204ENST00000552085 OR4F15Q8NGB8 312 aa10.69□□□□□ -0.7
SNRPF-204ENST00000552085 B4GALNT2Q8NHY0 566 aa10.69□□□□□ -0.7
SNRPF-204ENST00000552085 FBXO27Q8NI29 283 aa10.69□□□□□ -0.7
SNRPF-204ENST00000552085 RNF166Q96A37 237 aaPredicted RBP10.69□□□□□ -0.7
SNRPF-204ENST00000552085 EXOSC8Q96B26 276 aaKnown RBP10.69□□□□□ -0.7
SNRPF-204ENST00000552085 RAB39BQ96DA2 213 aa10.69□□□□□ -0.7
SNRPF-204ENST00000552085 ANKRD27Q96NW4 1050 aa10.69□□□□□ -0.7
SNRPF-204ENST00000552085 LMF2Q9BU23 707 aaKnown RBP10.69□□□□□ -0.7
SNRPF-204ENST00000552085 TRIM31Q9BZY9 425 aa10.69□□□□□ -0.7
SNRPF-204ENST00000552085 PLEK2Q9NYT0 353 aa10.69□□□□□ -0.7
SNRPF-204ENST00000552085 CCDC188H7C350 402 aa10.68□□□□□ -0.7
SNRPF-204ENST00000552085 IGKV1D-16P01601 117 aa10.68□□□□□ -0.7
SNRPF-204ENST00000552085 HPXP02790 462 aa10.68□□□□□ -0.7
SNRPF-204ENST00000552085 IFI6P09912 130 aa10.68□□□□□ -0.7
SNRPF-204ENST00000552085 SELEP16581 610 aa10.68□□□□□ -0.7
SNRPF-204ENST00000552085 STX2P32856 288 aa10.68□□□□□ -0.7
SNRPF-204ENST00000552085 NTF4P34130 210 aa10.68□□□□□ -0.7
SNRPF-204ENST00000552085 PRIM2P49643 509 aa10.68□□□□□ -0.7
SNRPF-204ENST00000552085 NAAAQ02083 359 aa10.68□□□□□ -0.7
SNRPF-204ENST00000552085 POU3F1Q03052 451 aaPredicted RBP10.68□□□□□ -0.7
SNRPF-204ENST00000552085 TGFBR3Q03167 851 aa10.68□□□□□ -0.7
SNRPF-204ENST00000552085 PDK3Q15120 406 aa10.68□□□□□ -0.7
SNRPF-204ENST00000552085 TECRLQ5HYJ1 363 aa10.68□□□□□ -0.7
SNRPF-204ENST00000552085 ABLIM2Q6H8Q1 611 aa10.68□□□□□ -0.7
SNRPF-204ENST00000552085 GAS2L3Q86XJ1 694 aa10.68□□□□□ -0.7
SNRPF-204ENST00000552085 OR2L13Q8N349 312 aa10.68□□□□□ -0.7
SNRPF-204ENST00000552085 ZNF527Q8NB42 609 aa10.68□□□□□ -0.7
SNRPF-204ENST00000552085 SLC16A11Q8NCK7 471 aa10.68□□□□□ -0.7
SNRPF-204ENST00000552085 OR4C3Q8NH37 302 aa10.68□□□□□ -0.7
SNRPF-204ENST00000552085 YIPF5Q969M3 257 aa10.68□□□□□ -0.7
SNRPF-204ENST00000552085 PHF21BQ96EK2 531 aa10.68□□□□□ -0.7
SNRPF-204ENST00000552085 BBS4Q96RK4 519 aa10.68□□□□□ -0.7
SNRPF-204ENST00000552085 GRID1Q9ULK0 1009 aa10.68□□□□□ -0.7
SNRPF-204ENST00000552085 SNX24Q9Y343 169 aa10.68□□□□□ -0.7
SNRPF-204ENST00000552085 COL7A1Q02388 2944 aa10.67□□□□□ -0.7
SNRPF-204ENST00000552085 A0A096LPK6 155 aa10.67□□□□□ -0.7
SNRPF-204ENST00000552085 GNG14A0A1W2PPG7 69 aa10.67□□□□□ -0.7
SNRPF-204ENST00000552085 HMX2A2RU54 273 aa10.67□□□□□ -0.7
SNRPF-204ENST00000552085 CLPSL1A2RUU4 121 aa10.67□□□□□ -0.7
SNRPF-204ENST00000552085 UPK1AO00322 258 aa10.67□□□□□ -0.7
SNRPF-204ENST00000552085 PIP5K1BO14986 540 aa10.67□□□□□ -0.7
SNRPF-204ENST00000552085 PCDH7O60245 1069 aa10.67□□□□□ -0.7
SNRPF-204ENST00000552085 MRPL33O75394 65 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms