RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 NOP53Q9NZM5 478 aaKnown RBP18■□□□□ 0.47
SSH1-207ENST00000547862 ABCA1O95477 2261 aa18■□□□□ 0.47
SSH1-207ENST00000547862 A0A1W2PR80 420 aa17.99■□□□□ 0.47
SSH1-207ENST00000547862 WDR91A4D1P6 747 aa17.99■□□□□ 0.47
SSH1-207ENST00000547862 SHISA9B4DS77 424 aa17.99■□□□□ 0.47
SSH1-207ENST00000547862 BCAS1O75363 584 aaPredicted RBP17.99■□□□□ 0.47
SSH1-207ENST00000547862 CPSF4O95639 269 aaKnown RBP17.99■□□□□ 0.47
SSH1-207ENST00000547862 AK1P00568 194 aa17.99■□□□□ 0.47
SSH1-207ENST00000547862 OR12D1P0DN82 309 aa17.99■□□□□ 0.47
SSH1-207ENST00000547862 CCNA2P20248 432 aa17.99■□□□□ 0.47
SSH1-207ENST00000547862 SERPINB5P36952 375 aa17.99■□□□□ 0.47
SSH1-207ENST00000547862 CSNK2A1P68400 391 aaPredicted RBP17.99■□□□□ 0.47
SSH1-207ENST00000547862 MAD2L1Q13257 205 aaPredicted RBP17.99■□□□□ 0.47
SSH1-207ENST00000547862 ZNF141Q15928 474 aa17.99■□□□□ 0.47
SSH1-207ENST00000547862 ABLIM2Q6H8Q1 611 aa17.99■□□□□ 0.47
SSH1-207ENST00000547862 TMEM234Q8WY98 164 aa17.99■□□□□ 0.47
SSH1-207ENST00000547862 ZNF350Q9GZX5 532 aa17.99■□□□□ 0.47
SSH1-207ENST00000547862 CTPS2Q9NRF8 586 aa17.99■□□□□ 0.47
SSH1-207ENST00000547862 YAE1D1Q9NRH1 226 aa17.99■□□□□ 0.47
SSH1-207ENST00000547862 EXD2Q9NVH0 621 aa17.99■□□□□ 0.47
SSH1-207ENST00000547862 EMC3Q9P0I2 261 aa17.99■□□□□ 0.47
SSH1-207ENST00000547862 LGALS13Q9UHV8 139 aa17.99■□□□□ 0.47
SSH1-207ENST00000547862 POU2F3Q9UKI9 436 aa17.99■□□□□ 0.47
SSH1-207ENST00000547862 ANK3Q12955 4377 aaKnown RBP17.99■□□□□ 0.47
SSH1-207ENST00000547862 CIB4A0PJX0 185 aa17.98■□□□□ 0.47
SSH1-207ENST00000547862 DUXAA6NLW8 204 aa17.98■□□□□ 0.47
SSH1-207ENST00000547862 CCT8L1PA6NM43 557 aa17.98■□□□□ 0.47
SSH1-207ENST00000547862 SSX4O60224 188 aa17.98■□□□□ 0.47
SSH1-207ENST00000547862 BPGMP07738 259 aa17.98■□□□□ 0.47
SSH1-207ENST00000547862 COX5AP20674 150 aa17.98■□□□□ 0.47
SSH1-207ENST00000547862 ZNF83P51522 516 aa17.98■□□□□ 0.47
SSH1-207ENST00000547862 CLDN8P56748 225 aa17.98■□□□□ 0.47
SSH1-207ENST00000547862 CHRNEQ04844 493 aa17.98■□□□□ 0.47
SSH1-207ENST00000547862 MAPK14Q16539 360 aa17.98■□□□□ 0.47
SSH1-207ENST00000547862 ARHGAP11BQ3KRB8 267 aa17.98■□□□□ 0.47
SSH1-207ENST00000547862 ATAD3BQ5T9A4 648 aa17.98■□□□□ 0.47
SSH1-207ENST00000547862 HEPHL1Q6MZM0 1159 aa17.98■□□□□ 0.47
SSH1-207ENST00000547862 TMPPEQ6ZT21 453 aa17.98■□□□□ 0.47
SSH1-207ENST00000547862 EIF3MQ7L2H7 374 aaKnown RBP17.98■□□□□ 0.47
SSH1-207ENST00000547862 XAGE5Q8WWM1 108 aa17.98■□□□□ 0.47
SSH1-207ENST00000547862 ZNF75CPQ92670 426 aaPredicted RBP17.98■□□□□ 0.47
SSH1-207ENST00000547862 HTRA1Q92743 480 aa17.98■□□□□ 0.47
SSH1-207ENST00000547862 USB1Q9BQ65 265 aaKnown RBP17.98■□□□□ 0.47
SSH1-207ENST00000547862 FAIMQ9NVQ4 179 aa17.98■□□□□ 0.47
SSH1-207ENST00000547862 PCDHGB4Q9UN71 923 aa17.98■□□□□ 0.47
SSH1-207ENST00000547862 NOSIPQ9Y314 301 aaKnown RBP17.98■□□□□ 0.47
SSH1-207ENST00000547862 WDR45Q9Y484 360 aa17.98■□□□□ 0.47
SSH1-207ENST00000547862 ZNF724A8MTY0 619 aa17.97■□□□□ 0.47
SSH1-207ENST00000547862 ETV2O00321 342 aaPredicted RBP17.97■□□□□ 0.47
SSH1-207ENST00000547862 ITM2AO43736 263 aa17.97■□□□□ 0.47
SSH1-207ENST00000547862 KIAA0513O60268 411 aa17.97■□□□□ 0.47
SSH1-207ENST00000547862 NUDT6P53370 316 aa17.97■□□□□ 0.47
SSH1-207ENST00000547862 TIMM23BQ5SRD1 257 aa17.97■□□□□ 0.47
SSH1-207ENST00000547862 ZNF433Q8N7K0 673 aaPredicted RBP17.97■□□□□ 0.47
SSH1-207ENST00000547862 ZNF781Q8N8C0 355 aa17.97■□□□□ 0.47
SSH1-207ENST00000547862 SLC25A43Q8WUT9 341 aaPredicted RBP17.97■□□□□ 0.47
SSH1-207ENST00000547862 APH1AQ96BI3 265 aa17.97■□□□□ 0.47
SSH1-207ENST00000547862 ZHX1-C8orf76Q96EF9 292 aa17.97■□□□□ 0.47
SSH1-207ENST00000547862 CACNG6Q9BXT2 260 aa17.97■□□□□ 0.47
SSH1-207ENST00000547862 DPY30Q9C005 99 aa17.97■□□□□ 0.47
SSH1-207ENST00000547862 OR11A1Q9GZK7 315 aa17.97■□□□□ 0.47
SSH1-207ENST00000547862 ACER3Q9NUN7 267 aa17.97■□□□□ 0.47
SSH1-207ENST00000547862 SPIN1Q9Y657 262 aaPredicted RBP17.97■□□□□ 0.47
SSH1-207ENST00000547862 OR5H1A6NKK0 313 aa17.96■□□□□ 0.47
SSH1-207ENST00000547862 M0R1B8 84 aa17.96■□□□□ 0.47
SSH1-207ENST00000547862 RNASET2O00584 256 aaKnown RBP17.96■□□□□ 0.47
SSH1-207ENST00000547862 CD8AP01732 235 aa17.96■□□□□ 0.47
SSH1-207ENST00000547862 NUDT17P0C025 328 aa17.96■□□□□ 0.47
SSH1-207ENST00000547862 KHKP50053 298 aa17.96■□□□□ 0.47
SSH1-207ENST00000547862 VSNL1P62760 191 aa17.96■□□□□ 0.47
SSH1-207ENST00000547862 HPCAP84074 193 aa17.96■□□□□ 0.47
SSH1-207ENST00000547862 EMX2Q04743 252 aa17.96■□□□□ 0.47
SSH1-207ENST00000547862 FUT5Q11128 374 aa17.96■□□□□ 0.47
SSH1-207ENST00000547862 GPAT3Q53EU6 434 aa17.96■□□□□ 0.47
SSH1-207ENST00000547862 C9orf135Q5VTT2 229 aa17.96■□□□□ 0.47
SSH1-207ENST00000547862 TYW3Q6IPR3 259 aaKnown RBP17.96■□□□□ 0.47
SSH1-207ENST00000547862 SLC22A25Q6T423 547 aa17.96■□□□□ 0.47
SSH1-207ENST00000547862 NUDCD3Q8IVD9 361 aa17.96■□□□□ 0.47
SSH1-207ENST00000547862 ARL5BQ96KC2 179 aa17.96■□□□□ 0.47
SSH1-207ENST00000547862 BARX1Q9HBU1 254 aaPredicted RBP17.96■□□□□ 0.47
SSH1-207ENST00000547862 CHRNA9Q9UGM1 479 aa17.96■□□□□ 0.47
SSH1-207ENST00000547862 FBN1P35555 2871 aaKnown RBP17.96■□□□□ 0.47
SSH1-207ENST00000547862 CLDN24A6NM45 220 aa17.95■□□□□ 0.46
SSH1-207ENST00000547862 CHI3L1P36222 383 aaPredicted RBP17.95■□□□□ 0.46
SSH1-207ENST00000547862 PGM1P36871 562 aa17.95■□□□□ 0.46
SSH1-207ENST00000547862 OR2B6P58173 313 aa17.95■□□□□ 0.46
SSH1-207ENST00000547862 CHI3L2Q15782 390 aa17.95■□□□□ 0.46
SSH1-207ENST00000547862 AGAP6Q5VW22 663 aa17.95■□□□□ 0.46
SSH1-207ENST00000547862 FBXW9Q5XUX1 488 aa17.95■□□□□ 0.46
SSH1-207ENST00000547862 HMBOX1Q6NT76 420 aa17.95■□□□□ 0.46
SSH1-207ENST00000547862 CASP12Q6UXS9 341 aa17.95■□□□□ 0.46
SSH1-207ENST00000547862 DTX2Q86UW9 622 aa17.95■□□□□ 0.46
SSH1-207ENST00000547862 ROPN1LQ96C74 230 aa17.95■□□□□ 0.46
SSH1-207ENST00000547862 TRIM44Q96DX7 344 aaPredicted RBP17.95■□□□□ 0.46
SSH1-207ENST00000547862 CCDC106Q9BWC9 280 aa17.95■□□□□ 0.46
SSH1-207ENST00000547862 C1QTNF6Q9BXI9 259 aa17.95■□□□□ 0.46
SSH1-207ENST00000547862 AKTIPQ9H8T0 292 aa17.95■□□□□ 0.46
SSH1-207ENST00000547862 B3GALT5Q9Y2C3 310 aa17.95■□□□□ 0.46
SSH1-207ENST00000547862 SLC35A3Q9Y2D2 325 aa17.95■□□□□ 0.46
SSH1-207ENST00000547862 PLCE1Q9P212 2302 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms