RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 ZNF524Q96C55 264 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 IMMP1LQ96LU5 166 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 NODALQ96S42 347 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 ZNF426Q9BUY5 554 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 TSSK6Q9BXA6 273 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 FAM192AQ9GZU8 254 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 LAT2Q9GZY6 243 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 DUSP21Q9H596 190 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 IL20Q9NYY1 176 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 ERVK-18Q9QC07 812 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 FARSAQ9Y285 508 aaKnown RBP10.07□□□□□ -0.8
SCG3-202ENST00000542355 A0A087WUJ7 227 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 NSG1A0A0A6YYJ2 146 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 SPAARA0A1B0GVQ0 90 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 UNC119BA6NIH7 251 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 TLX2O43763 284 aaPredicted RBP10.07□□□□□ -0.8
SCG3-202ENST00000542355 NUDT14O95848 222 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 RBM34P42696 430 aaKnown RBP10.07□□□□□ -0.8
SCG3-202ENST00000542355 CRYZQ08257 329 aaKnown RBP10.07□□□□□ -0.8
SCG3-202ENST00000542355 SLC30A6Q6NXT4 461 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 ZNF620Q6ZNG0 422 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 TMPRSS11FQ6ZWK6 438 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 AHSA2Q719I0 299 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 DUSP19Q8WTR2 217 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 TRUB1Q8WWH5 349 aaKnown RBP10.07□□□□□ -0.8
SCG3-202ENST00000542355 OSTF1Q92882 214 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 TMCO6Q96DC7 493 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 USB1Q9BQ65 265 aaKnown RBP10.07□□□□□ -0.8
SCG3-202ENST00000542355 ZNF160Q9HCG1 818 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 TBC1D23Q9NUY8 699 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 SNX5Q9Y5X3 404 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 KIF26BQ2KJY2 2108 aa10.06□□□□□ -0.8
SCG3-202ENST00000542355 MASP2O00187 686 aa10.06□□□□□ -0.8
SCG3-202ENST00000542355 SOCS6O14544 535 aa10.06□□□□□ -0.8
SCG3-202ENST00000542355 PRKYO43930 277 aa10.06□□□□□ -0.8
SCG3-202ENST00000542355 TNFSF15O95150 251 aa10.06□□□□□ -0.8
SCG3-202ENST00000542355 CH25HO95992 272 aa10.06□□□□□ -0.8
SCG3-202ENST00000542355 OTX2P32243 289 aa10.06□□□□□ -0.8
SCG3-202ENST00000542355 NBL1P41271 181 aa10.06□□□□□ -0.8
SCG3-202ENST00000542355 PCYT1AP49585 367 aa10.06□□□□□ -0.8
SCG3-202ENST00000542355 CTBP2P56545 445 aa10.06□□□□□ -0.8
SCG3-202ENST00000542355 RPS15P62841 145 aaKnown RBP10.06□□□□□ -0.8
SCG3-202ENST00000542355 PMS2P3Q13401 168 aa10.06□□□□□ -0.8
SCG3-202ENST00000542355 EXT1Q16394 746 aa10.06□□□□□ -0.8
SCG3-202ENST00000542355 SNAPC1Q16533 368 aa10.06□□□□□ -0.8
SCG3-202ENST00000542355 PLAG1Q6DJT9 500 aa10.06□□□□□ -0.8
SCG3-202ENST00000542355 OR5M10Q6IEU7 315 aa10.06□□□□□ -0.8
SCG3-202ENST00000542355 MARCH9Q86YJ5 346 aa10.06□□□□□ -0.8
SCG3-202ENST00000542355 OR51A7Q8NH64 312 aa10.06□□□□□ -0.8
SCG3-202ENST00000542355 SAMD8Q96LT4 415 aa10.06□□□□□ -0.8
SCG3-202ENST00000542355 CLN6Q9NWW5 311 aa10.06□□□□□ -0.8
SCG3-202ENST00000542355 ICAM5Q9UMF0 924 aa10.06□□□□□ -0.8
SCG3-202ENST00000542355 TMEM5Q9Y2B1 443 aa10.06□□□□□ -0.8
SCG3-202ENST00000542355 SMIM31A0A1B0GVY4 71 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 CCDC160A6NGH7 325 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 ENO4A6NNW6 628 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 CLCA1A8K7I4 914 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 EFCAB9A8MZ26 197 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 H3BSA7 217 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 EIF4E2O60573 245 aaKnown RBP10.05□□□□□ -0.8
SCG3-202ENST00000542355 ENTPD6O75354 484 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 IGHEP01854 428 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 RAB40ALP0C0E4 278 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 CDK4P11802 303 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 NAGAP17050 411 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 ENDOUP21128 410 aaKnown RBP10.05□□□□□ -0.8
SCG3-202ENST00000542355 MST1P26927 711 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 SLC6A8P48029 635 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 SNRPGP62308 76 aaKnown RBP10.05□□□□□ -0.8
SCG3-202ENST00000542355 SSPNQ14714 243 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 TOMM34Q15785 309 aaPredicted RBP10.05□□□□□ -0.8
SCG3-202ENST00000542355 NDUFAF7Q7L592 441 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 BCDIN3DQ7Z5W3 292 aaKnown RBP10.05□□□□□ -0.8
SCG3-202ENST00000542355 ZBTB46Q86UZ6 589 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 OR8J1Q8NGP2 316 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 OR13C2Q8NGS9 318 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 OR5W2Q8NH69 310 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 M1APQ8TC57 530 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 SLC22A8Q8TCC7 542 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 IPCEF1Q8WWN9 437 aaPredicted RBP10.05□□□□□ -0.8
SCG3-202ENST00000542355 GGHQ92820 318 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 HGDQ93099 445 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 RASL10BQ96S79 203 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 OR52D1Q9H346 318 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 SLC25A19Q9HC21 320 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 GALNT9Q9HCQ5 603 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 MMP25Q9NPA2 562 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 PLCXD1Q9NUJ7 323 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 NDUFA13Q9P0J0 144 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 PSORS1C1Q9UIG5 152 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 CDH10Q9Y6N8 788 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 TRAV27A0A087WT01 109 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 ELOA3DA6NLF2 546 aaPredicted RBP10.05□□□□□ -0.8
SCG3-202ENST00000542355 LRRN3E7EW58 273 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 RGS10O43665 173 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 ITGA10O75578 1167 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 FTH1P19P0C7X4 201 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 BMP7P18075 431 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 SLC1A3P43003 542 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 MLLT10P55197 1068 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms