RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 TRANK1O15050 2925 aa14.2□□□□□ -0.14
CNOT9-208ENST00000542068 MPC2O95563 127 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 IGHA1P01876 353 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 THBS2P35442 1172 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 SELENOPP49908 381 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 RAB14P61106 215 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 C1orf61Q13536 156 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 SLC36A2Q495M3 483 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 PRRT3Q5FWE3 981 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 ZNF836Q6ZNA1 936 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 PARGQ86W56 976 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 SLC44A3Q8N4M1 653 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 DERL3Q96Q80 235 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 RANBP3Q9H6Z4 567 aaPredicted RBP14.19□□□□□ -0.14
CNOT9-208ENST00000542068 GPR171O14626 319 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 CLEC3AO75596 197 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 RGS11O94810 467 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 F8A1P23610 371 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 HSD17B2P37059 387 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 TSPAN5P62079 268 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 RPS21P63220 83 aaKnown RBP14.19□□□□□ -0.14
CNOT9-208ENST00000542068 ARHGAP19Q14CB8 494 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 SLC25A25Q6KCM7 469 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 GLRX5Q86SX6 157 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 THAP4Q8WY91 577 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 ACOT12Q8WYK0 555 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 DDOQ99489 341 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 SEC22CQ9BRL7 303 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 APOOQ9BUR5 198 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 PBX4Q9BYU1 374 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 PRDM7Q9NQW5 492 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 RCE1Q9Y256 329 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 EXOGQ9Y2C4 368 aaKnown RBP14.19□□□□□ -0.14
CNOT9-208ENST00000542068 MDC1Q14676 2089 aaKnown RBP14.19□□□□□ -0.14
CNOT9-208ENST00000542068 MTCL1Q9Y4B5 1905 aaKnown RBP14.19□□□□□ -0.14
CNOT9-208ENST00000542068 GMDSO60547 372 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 SLC35G6P0C7Q6 338 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 NPR2P20594 1047 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 IGFALSP35858 605 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 DUSP5Q16690 384 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 TRMT12Q53H54 448 aaKnown RBP14.19□□□□□ -0.14
CNOT9-208ENST00000542068 ZNF776Q68DI1 518 aaPredicted RBP14.19□□□□□ -0.14
CNOT9-208ENST00000542068 OR2L5Q8NG80 312 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 OR4K13Q8NH42 304 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 SMPDL3BQ92485 455 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 RIT1Q92963 219 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 WDR89Q96FK6 387 aaPredicted RBP14.19□□□□□ -0.14
CNOT9-208ENST00000542068 SIPA1Q96FS4 1042 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 TEAD3Q99594 435 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 ARHGDIGQ99819 225 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 NT5DC2Q9H857 520 aa14.19□□□□□ -0.14
CNOT9-208ENST00000542068 OR2W5A6NFC9 320 aa14.18□□□□□ -0.14
CNOT9-208ENST00000542068 PRKNO60260 465 aaPredicted RBP14.18□□□□□ -0.14
CNOT9-208ENST00000542068 LAMP2P13473 410 aa14.18□□□□□ -0.14
CNOT9-208ENST00000542068 F3P13726 295 aa14.18□□□□□ -0.14
CNOT9-208ENST00000542068 VEGFCP49767 419 aa14.18□□□□□ -0.14
CNOT9-208ENST00000542068 DECR1Q16698 335 aa14.18□□□□□ -0.14
CNOT9-208ENST00000542068 PYHIN1Q6K0P9 492 aa14.18□□□□□ -0.14
CNOT9-208ENST00000542068 GALNT11Q8NCW6 608 aa14.18□□□□□ -0.14
CNOT9-208ENST00000542068 OR5T3Q8NGG3 340 aa14.18□□□□□ -0.14
CNOT9-208ENST00000542068 YIPF5Q969M3 257 aa14.18□□□□□ -0.14
CNOT9-208ENST00000542068 SCMH1Q96GD3 660 aa14.18□□□□□ -0.14
CNOT9-208ENST00000542068 OR14A2Q96R54 314 aa14.18□□□□□ -0.14
CNOT9-208ENST00000542068 TIMP4Q99727 224 aa14.18□□□□□ -0.14
CNOT9-208ENST00000542068 HDAC8Q9BY41 377 aa14.18□□□□□ -0.14
CNOT9-208ENST00000542068 ELF5Q9UKW6 265 aaPredicted RBP14.18□□□□□ -0.14
CNOT9-208ENST00000542068 OR6C74A6NCV1 312 aa14.18□□□□□ -0.14
CNOT9-208ENST00000542068 FAM86C2PA6NEL3 165 aa14.18□□□□□ -0.14
CNOT9-208ENST00000542068 KLF8O95600 359 aaPredicted RBP14.18□□□□□ -0.14
CNOT9-208ENST00000542068 ALDOBP05062 364 aa14.18□□□□□ -0.14
CNOT9-208ENST00000542068 RBMS1P29558 406 aaKnown RBP14.18□□□□□ -0.14
CNOT9-208ENST00000542068 FXYD6P3P58550 94 aa14.18□□□□□ -0.14
CNOT9-208ENST00000542068 BTG1P62324 171 aa14.18□□□□□ -0.14
CNOT9-208ENST00000542068 EXOSC7Q15024 291 aaKnown RBP14.18□□□□□ -0.14
CNOT9-208ENST00000542068 SLC48A1Q6P1K1 146 aa14.18□□□□□ -0.14
CNOT9-208ENST00000542068 FRRS1Q6ZNA5 592 aa14.18□□□□□ -0.14
CNOT9-208ENST00000542068 SPERTQ8NA61 448 aa14.18□□□□□ -0.14
CNOT9-208ENST00000542068 FAM98AQ8NCA5 519 aaKnown RBP14.18□□□□□ -0.14
CNOT9-208ENST00000542068 SDR9C7Q8NEX9 313 aa14.18□□□□□ -0.14
CNOT9-208ENST00000542068 RPLP0P6Q8NHW5 317 aa14.18□□□□□ -0.14
CNOT9-208ENST00000542068 HS6ST2Q96MM7 605 aa14.18□□□□□ -0.14
CNOT9-208ENST00000542068 ACTRT3Q9BYD9 372 aa14.18□□□□□ -0.14
CNOT9-208ENST00000542068 ZMIZ1Q9ULJ6 1067 aa14.18□□□□□ -0.14
CNOT9-208ENST00000542068 TRABD2BA6NFA1 517 aa14.17□□□□□ -0.14
CNOT9-208ENST00000542068 LRRN3E7EW58 273 aa14.17□□□□□ -0.14
CNOT9-208ENST00000542068 IMPA2O14732 288 aa14.17□□□□□ -0.14
CNOT9-208ENST00000542068 C5AR1P21730 350 aa14.17□□□□□ -0.14
CNOT9-208ENST00000542068 FOXK2Q01167 660 aa14.17□□□□□ -0.14
CNOT9-208ENST00000542068 ITPRIPL2Q3MIP1 535 aa14.17□□□□□ -0.14
CNOT9-208ENST00000542068 PRSS41Q7RTY9 318 aa14.17□□□□□ -0.14
CNOT9-208ENST00000542068 LGALS14Q8TCE9 139 aa14.17□□□□□ -0.14
CNOT9-208ENST00000542068 HERVK_113Q902F9 699 aa14.17□□□□□ -0.14
CNOT9-208ENST00000542068 GPR137Q96N19 417 aa14.17□□□□□ -0.14
CNOT9-208ENST00000542068 PTCHD1Q96NR3 888 aa14.17□□□□□ -0.14
CNOT9-208ENST00000542068 MYADMQ96S97 322 aa14.17□□□□□ -0.14
CNOT9-208ENST00000542068 LRRN3Q9H3W5 708 aa14.17□□□□□ -0.14
CNOT9-208ENST00000542068 NANSQ9NR45 359 aa14.17□□□□□ -0.14
CNOT9-208ENST00000542068 GNG8Q9UK08 70 aa14.17□□□□□ -0.14
CNOT9-208ENST00000542068 PLXNA2O75051 1894 aa14.17□□□□□ -0.14
CNOT9-208ENST00000542068 CXorf51AA0A1B0GTR3 108 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms