RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 ADGBQ8N7X0 1667 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 TMEM131LA2VDJ0 1609 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 OVOS2A0A0G2JMS6 1433 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 OVOS2A0A0J9YW53 1432 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 NPHP4O75161 1426 aaPredicted RBP2.77□□□□□ -1.97
USP28-210ENST00000542033 NCAPD2Q15021 1401 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 PTPRKQ15262 1439 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 OVOS2Q6IE36 1432 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 RFX7Q2KHR2 1363 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 CHD1O14646 1710 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 MYO5CQ9NQX4 1742 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 CROCC2H7BZ55 1655 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 A0A1W2PQ72 361 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 C15orf61A6NNL5 157 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 CYSRT1A8MQ03 144 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 IQCF5A8MTL0 148 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 A8MVM7 634 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 SNURFLB1AK76 121 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 E5RI56 91 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 LOC110117498-PIK3R3F6TDL0 507 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 CXCL11O14625 94 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 ABCD4O14678 606 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 ITGB1BP1O14713 200 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 RRP8O43159 456 aaKnown RBP2.77□□□□□ -1.97
USP28-210ENST00000542033 B4GAT1O43505 415 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 TSPAN2O60636 221 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 LRP3O75074 770 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 CLDN1O95832 211 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 CCNE2O96020 404 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 TNNC2P02585 160 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 VTNP04004 478 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 APRTP07741 180 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 FHP07954 510 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 RBP1P09455 135 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 GNAO1P09471 354 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 TRIM49P0CI25 452 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 TRIM49CP0CI26 452 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 COX5BP10606 129 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 HSPD1P10809 573 aaKnown RBP2.77□□□□□ -1.97
USP28-210ENST00000542033 MCF2P10911 925 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 RALBP11234 206 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 ODC1P11926 461 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 COX4I1P13073 169 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 RPL35AP18077 110 aaKnown RBP2.77□□□□□ -1.97
USP28-210ENST00000542033 CYP2B6P20813 491 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 IMPDH1P20839 514 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 CPN2P22792 545 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 WARSP23381 471 aaKnown RBP2.77□□□□□ -1.97
USP28-210ENST00000542033 FCARP24071 287 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 GJB2P29033 226 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 HOXA9P31269 272 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 RCVRNP35243 200 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 UGT2B10P36537 528 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 ALDH3B1P43353 468 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 NAMPTP43490 491 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 TSFMP43897 325 aaKnown RBP2.77□□□□□ -1.97
USP28-210ENST00000542033 DHPSP49366 369 aaPredicted RBP2.77□□□□□ -1.97
USP28-210ENST00000542033 FHITP49789 147 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 TPMTP51580 245 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 CCR4P51679 360 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 GEMP55040 296 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 TRA2BP62995 288 aaKnown RBP2.77□□□□□ -1.97
USP28-210ENST00000542033 SELENBP1Q13228 472 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 CHIT1Q13231 466 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 SLC39A6Q13433 755 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 GPR50Q13585 617 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 KRR1Q13601 381 aaKnown RBP2.77□□□□□ -1.97
USP28-210ENST00000542033 CEACAM7Q14002 265 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 GRB14Q14449 540 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 CDK10Q15131 360 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 SPHARQ15513 63 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 UAP1Q16222 522 aaPredicted RBP2.77□□□□□ -1.97
USP28-210ENST00000542033 SSX2Q16385 188 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 KYAT1Q16773 422 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 FAM83EQ2M2I3 478 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 TRIM16LQ309B1 348 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 XKR4Q5GH76 650 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 ZNF772Q68DY9 489 aaPredicted RBP2.77□□□□□ -1.97
USP28-210ENST00000542033 HIST2H2AA3Q6FI13 130 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 TCEAL6Q6IPX3 200 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 FAAP20Q6NZ36 180 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 SCYL2Q6P3W7 929 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 SLC24A5Q71RS6 500 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 FCRLAQ7L513 359 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 COPS6Q7L5N1 327 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 TMCO2Q7Z6W1 182 aaPredicted RBP2.77□□□□□ -1.97
USP28-210ENST00000542033 LINC00523Q86TU6 105 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 AMZ2Q86W34 360 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 TRIM69Q86WT6 500 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 ZNF573Q86YE8 665 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 SLC13A5Q86YT5 568 aaPredicted RBP2.77□□□□□ -1.97
USP28-210ENST00000542033 GID4Q8IVV7 300 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 CTAGE3PQ8IX95 158 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 GPC2Q8N158 579 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 MMGT1Q8N4V1 131 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 CCDC185Q8N715 623 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 ZNF485Q8NCK3 441 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 SPATA4Q8NEY3 305 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 OR8J2Q8NGG1 315 aa2.77□□□□□ -1.97
USP28-210ENST00000542033 ZNF420Q8TAQ5 688 aaPredicted RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms