RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 RAB1CQ92928 201 aa8.12□□□□□ -1.11
YBX3-211ENST00000541351 RAB8BQ92930 207 aa8.12□□□□□ -1.11
YBX3-211ENST00000541351 EXT2Q93063 718 aa8.12□□□□□ -1.11
YBX3-211ENST00000541351 SLC47A1Q96FL8 570 aa8.12□□□□□ -1.11
YBX3-211ENST00000541351 BOD1Q96IK1 185 aa8.12□□□□□ -1.11
YBX3-211ENST00000541351 OR5B2Q96R09 309 aa8.12□□□□□ -1.11
YBX3-211ENST00000541351 RBBP8Q99708 897 aa8.12□□□□□ -1.11
YBX3-211ENST00000541351 SERHL2Q9H4I8 314 aa8.12□□□□□ -1.11
YBX3-211ENST00000541351 UBQLN4Q9NRR5 601 aa8.12□□□□□ -1.11
YBX3-211ENST00000541351 DDX18Q9NVP1 670 aaKnown RBP8.12□□□□□ -1.11
YBX3-211ENST00000541351 TMEM45AQ9NWC5 275 aa8.12□□□□□ -1.11
YBX3-211ENST00000541351 ACOT9Q9Y305 439 aa8.12□□□□□ -1.11
YBX3-211ENST00000541351 ACTL7BQ9Y614 415 aa8.12□□□□□ -1.11
YBX3-211ENST00000541351 SPIN1Q9Y657 262 aaPredicted RBP8.12□□□□□ -1.11
YBX3-211ENST00000541351 A0A1W2PNR3 127 aa8.11□□□□□ -1.11
YBX3-211ENST00000541351 A0A1W2PQD3 144 aa8.11□□□□□ -1.11
YBX3-211ENST00000541351 SYCE1LA8MT33 242 aa8.11□□□□□ -1.11
YBX3-211ENST00000541351 CLDN25C9JDP6 229 aa8.11□□□□□ -1.11
YBX3-211ENST00000541351 PDLIM1O00151 329 aa8.11□□□□□ -1.11
YBX3-211ENST00000541351 KLF11O14901 512 aa8.11□□□□□ -1.11
YBX3-211ENST00000541351 WNT9BO14905 357 aa8.11□□□□□ -1.11
YBX3-211ENST00000541351 DNPH1O43598 174 aa8.11□□□□□ -1.11
YBX3-211ENST00000541351 KRT33AO76009 404 aa8.11□□□□□ -1.11
YBX3-211ENST00000541351 HOXB1P14653 301 aaPredicted RBP8.11□□□□□ -1.11
YBX3-211ENST00000541351 FKBP2P26885 142 aaKnown RBP8.11□□□□□ -1.11
YBX3-211ENST00000541351 TAS2R39P59534 338 aa8.11□□□□□ -1.11
YBX3-211ENST00000541351 SLC25A3Q00325 362 aa8.11□□□□□ -1.11
YBX3-211ENST00000541351 CD69Q07108 199 aa8.11□□□□□ -1.11
YBX3-211ENST00000541351 DAG1Q14118 895 aa8.11□□□□□ -1.11
YBX3-211ENST00000541351 ZNF460Q14592 562 aa8.11□□□□□ -1.11
YBX3-211ENST00000541351 HEPACAMQ14CZ8 416 aa8.11□□□□□ -1.11
YBX3-211ENST00000541351 TRIP13Q15645 432 aaPredicted RBP8.11□□□□□ -1.11
YBX3-211ENST00000541351 APOOLQ6UXV4 268 aa8.11□□□□□ -1.11
YBX3-211ENST00000541351 C9orf139Q6ZV77 190 aa8.11□□□□□ -1.11
YBX3-211ENST00000541351 COMMD6Q7Z4G1 85 aa8.11□□□□□ -1.11
YBX3-211ENST00000541351 CARM1Q86X55 608 aa8.11□□□□□ -1.11
YBX3-211ENST00000541351 METTL4Q8N3J2 472 aa8.11□□□□□ -1.11
YBX3-211ENST00000541351 TMEM86BQ8N661 226 aa8.11□□□□□ -1.11
YBX3-211ENST00000541351 ZNF527Q8NB42 609 aa8.11□□□□□ -1.11
YBX3-211ENST00000541351 OR6Y1Q8NGX8 325 aa8.11□□□□□ -1.11
YBX3-211ENST00000541351 SLC25A43Q8WUT9 341 aaPredicted RBP8.11□□□□□ -1.11
YBX3-211ENST00000541351 ZNF48Q96MX3 618 aaPredicted RBP8.11□□□□□ -1.11
YBX3-211ENST00000541351 NPAS1Q99742 590 aa8.11□□□□□ -1.11
YBX3-211ENST00000541351 GAL3ST1Q99999 423 aa8.11□□□□□ -1.11
YBX3-211ENST00000541351 LMF2Q9BU23 707 aaKnown RBP8.11□□□□□ -1.11
YBX3-211ENST00000541351 GATA5Q9BWX5 397 aaPredicted RBP8.11□□□□□ -1.11
YBX3-211ENST00000541351 MRPL1Q9BYD6 325 aaKnown RBP8.11□□□□□ -1.11
YBX3-211ENST00000541351 IQCGQ9H095 443 aaKnown RBP8.11□□□□□ -1.11
YBX3-211ENST00000541351 ANKRA2Q9H9E1 313 aa8.11□□□□□ -1.11
YBX3-211ENST00000541351 AURKAIP1Q9NWT8 199 aaPredicted RBP8.11□□□□□ -1.11
YBX3-211ENST00000541351 C1RLQ9NZP8 487 aa8.11□□□□□ -1.11
YBX3-211ENST00000541351 C19orf53Q9UNZ5 99 aaPredicted RBP8.11□□□□□ -1.11
YBX3-211ENST00000541351 NOX1Q9Y5S8 564 aa8.11□□□□□ -1.11
YBX3-211ENST00000541351 TMEM129A0AVI4 362 aa8.1□□□□□ -1.11
YBX3-211ENST00000541351 SRRM5B3KS81 715 aa8.1□□□□□ -1.11
YBX3-211ENST00000541351 SUPT3HB4E1H0 165 aa8.1□□□□□ -1.11
YBX3-211ENST00000541351 DYNC1I1O14576 645 aa8.1□□□□□ -1.11
YBX3-211ENST00000541351 DEAF1O75398 565 aaPredicted RBP8.1□□□□□ -1.11
YBX3-211ENST00000541351 SUPT3HO75486 399 aa8.1□□□□□ -1.11
YBX3-211ENST00000541351 GPANK1O95872 356 aa8.1□□□□□ -1.11
YBX3-211ENST00000541351 HPXP02790 462 aa8.1□□□□□ -1.11
YBX3-211ENST00000541351 CECR9P0C854 216 aa8.1□□□□□ -1.11
YBX3-211ENST00000541351 TIA1P31483 386 aaKnown RBP eCLIP8.1□□□□□ -1.114e-8■■■■■ 30.5
YBX3-211ENST00000541351 GABRA3P34903 492 aa8.1□□□□□ -1.11
YBX3-211ENST00000541351 DIO1P49895 249 aa8.1□□□□□ -1.11
YBX3-211ENST00000541351 P2RX1P51575 399 aa8.1□□□□□ -1.11
YBX3-211ENST00000541351 SLC16A1P53985 500 aa8.1□□□□□ -1.11
YBX3-211ENST00000541351 SELENOVP59797 346 aa8.1□□□□□ -1.11
YBX3-211ENST00000541351 MVKQ03426 396 aa8.1□□□□□ -1.11
YBX3-211ENST00000541351 SNTB2Q13425 540 aaKnown RBP8.1□□□□□ -1.11
YBX3-211ENST00000541351 DCTN2Q13561 401 aaKnown RBP8.1□□□□□ -1.11
YBX3-211ENST00000541351 PCGF3Q3KNV8 242 aa8.1□□□□□ -1.11
YBX3-211ENST00000541351 FRG2Q64ET8 278 aa8.1□□□□□ -1.11
YBX3-211ENST00000541351 FIP1L1Q6UN15 594 aaKnown RBP8.1□□□□□ -1.11
YBX3-211ENST00000541351 TMPPEQ6ZT21 453 aa8.1□□□□□ -1.11
YBX3-211ENST00000541351 ZC3HC1Q86WB0 502 aaKnown RBP8.1□□□□□ -1.11
YBX3-211ENST00000541351 VSTM4Q8IW00 320 aa8.1□□□□□ -1.11
YBX3-211ENST00000541351 GATSQ8NAP1 163 aa8.1□□□□□ -1.11
YBX3-211ENST00000541351 OR52E4Q8NGH9 312 aa8.1□□□□□ -1.11
YBX3-211ENST00000541351 GPR151Q8TDV0 419 aa8.1□□□□□ -1.11
YBX3-211ENST00000541351 ATP6V1E2Q96A05 226 aa8.1□□□□□ -1.11
YBX3-211ENST00000541351 EXOSC8Q96B26 276 aaKnown RBP8.1□□□□□ -1.11
YBX3-211ENST00000541351 TM4SF18Q96CE8 201 aa8.1□□□□□ -1.11
YBX3-211ENST00000541351 LRRC39Q96DD0 335 aa8.1□□□□□ -1.11
YBX3-211ENST00000541351 FRG2BQ96QU4 278 aa8.1□□□□□ -1.11
YBX3-211ENST00000541351 NOX4Q9NPH5 578 aa8.1□□□□□ -1.11
YBX3-211ENST00000541351 SLC35C2Q9NQQ7 365 aa8.1□□□□□ -1.11
YBX3-211ENST00000541351 SLC7A10Q9NS82 523 aa8.1□□□□□ -1.11
YBX3-211ENST00000541351 CRNNQ9UBG3 495 aaPredicted RBP8.1□□□□□ -1.11
YBX3-211ENST00000541351 SEC14L4Q9UDX3 406 aa8.1□□□□□ -1.11
YBX3-211ENST00000541351 ICAM5Q9UMF0 924 aa8.1□□□□□ -1.11
YBX3-211ENST00000541351 PCNX3Q9H6A9 2034 aa8.1□□□□□ -1.11
YBX3-211ENST00000541351 BIRC6Q9NR09 4857 aa8.09□□□□□ -1.11
YBX3-211ENST00000541351 ARPC4-TTLL3A0A0A6YYG9 625 aa8.09□□□□□ -1.11
YBX3-211ENST00000541351 HOXA3O43365 443 aaPredicted RBP8.09□□□□□ -1.11
YBX3-211ENST00000541351 NME6O75414 186 aaPredicted RBP8.09□□□□□ -1.11
YBX3-211ENST00000541351 KRT14P02533 472 aa8.09□□□□□ -1.11
YBX3-211ENST00000541351 CD1DP15813 335 aa8.09□□□□□ -1.11
YBX3-211ENST00000541351 GSTM5P46439 218 aa8.09□□□□□ -1.11
YBX3-211ENST00000541351 SERPINB4P48594 390 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms