RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 MEMO1Q9Y316 297 aa13.97□□□□□ -0.17
DDB1-218ENST00000540784 SH3GLB1Q9Y371 365 aa13.97□□□□□ -0.17
DDB1-218ENST00000540784 ZNF407Q9C0G0 2248 aa13.96□□□□□ -0.17
DDB1-218ENST00000540784 FREM3P0C091 2139 aa13.96□□□□□ -0.17
DDB1-218ENST00000540784 TMED7-TICAM2A0A0A6YYA0 188 aa13.96□□□□□ -0.17
DDB1-218ENST00000540784 M0R3H8 397 aa13.96□□□□□ -0.17
DDB1-218ENST00000540784 EIF1AYO14602 144 aaKnown RBP13.96□□□□□ -0.17
DDB1-218ENST00000540784 ZNF682O95780 498 aa13.96□□□□□ -0.17
DDB1-218ENST00000540784 SERPINA1P01009 418 aa13.96□□□□□ -0.17
DDB1-218ENST00000540784 CCNA2P20248 432 aa13.96□□□□□ -0.17
DDB1-218ENST00000540784 CXCR1P25024 350 aa13.96□□□□□ -0.17
DDB1-218ENST00000540784 SFTPDP35247 375 aa13.96□□□□□ -0.17
DDB1-218ENST00000540784 ZNF136P52737 540 aa13.96□□□□□ -0.17
DDB1-218ENST00000540784 CLDN15P56746 228 aa13.96□□□□□ -0.17
DDB1-218ENST00000540784 NCALDP61601 193 aa13.96□□□□□ -0.17
DDB1-218ENST00000540784 SELENBP1Q13228 472 aa13.96□□□□□ -0.17
DDB1-218ENST00000540784 SGCBQ16585 318 aa13.96□□□□□ -0.17
DDB1-218ENST00000540784 NRF1Q16656 503 aa13.96□□□□□ -0.17
DDB1-218ENST00000540784 DNAL1Q4LDG9 190 aa13.96□□□□□ -0.17
DDB1-218ENST00000540784 PDSS1Q5T2R2 415 aa13.96□□□□□ -0.17
DDB1-218ENST00000540784 MTFR2Q6P444 385 aa13.96□□□□□ -0.17
DDB1-218ENST00000540784 ESPNLQ6ZVH7 1005 aa13.96□□□□□ -0.17
DDB1-218ENST00000540784 LSMEM1Q8N8F7 131 aa13.96□□□□□ -0.17
DDB1-218ENST00000540784 VANGL1Q8TAA9 524 aaPredicted RBP13.96□□□□□ -0.17
DDB1-218ENST00000540784 TRIB1Q96RU8 372 aa13.96□□□□□ -0.17
DDB1-218ENST00000540784 MCHR1Q99705 422 aa13.96□□□□□ -0.17
DDB1-218ENST00000540784 TUBA1CQ9BQE3 449 aa13.96□□□□□ -0.17
DDB1-218ENST00000540784 WFDC6Q9BQY6 131 aa13.96□□□□□ -0.17
DDB1-218ENST00000540784 THTPAQ9BU02 230 aa13.96□□□□□ -0.17
DDB1-218ENST00000540784 GORASP2Q9H8Y8 452 aa13.96□□□□□ -0.17
DDB1-218ENST00000540784 CALHM2Q9HA72 323 aa13.96□□□□□ -0.17
DDB1-218ENST00000540784 OSGIN1Q9UJX0 560 aa13.96□□□□□ -0.17
DDB1-218ENST00000540784 TMED7Q9Y3B3 224 aa13.96□□□□□ -0.17
DDB1-218ENST00000540784 SPIN1Q9Y657 262 aaPredicted RBP13.96□□□□□ -0.17
DDB1-218ENST00000540784 RP1L1Q8IWN7 2480 aaPredicted RBP13.96□□□□□ -0.18
DDB1-218ENST00000540784 H0YC42 278 aa13.95□□□□□ -0.18
DDB1-218ENST00000540784 ADAMDEC1O15204 470 aa13.95□□□□□ -0.18
DDB1-218ENST00000540784 TFPIP10646 304 aa13.95□□□□□ -0.18
DDB1-218ENST00000540784 MAP2K6P52564 334 aa13.95□□□□□ -0.18
DDB1-218ENST00000540784 TPD52P55327 224 aaPredicted RBP13.95□□□□□ -0.18
DDB1-218ENST00000540784 PER3P56645 1201 aa13.95□□□□□ -0.18
DDB1-218ENST00000540784 CARD18P57730 90 aa13.95□□□□□ -0.18
DDB1-218ENST00000540784 PMPCAQ10713 525 aa13.95□□□□□ -0.18
DDB1-218ENST00000540784 HBMQ6B0K9 141 aa13.95□□□□□ -0.18
DDB1-218ENST00000540784 RTL6Q6ICC9 239 aa13.95□□□□□ -0.18
DDB1-218ENST00000540784 RPTNQ6XPR3 784 aa13.95□□□□□ -0.18
DDB1-218ENST00000540784 B3GNT6Q6ZMB0 384 aa13.95□□□□□ -0.18
DDB1-218ENST00000540784 FKBP9P1Q75LS8 142 aa13.95□□□□□ -0.18
DDB1-218ENST00000540784 CBLL1Q75N03 491 aa13.95□□□□□ -0.18
DDB1-218ENST00000540784 GGNQ86UU5 652 aa13.95□□□□□ -0.18
DDB1-218ENST00000540784 CARM1Q86X55 608 aa13.95□□□□□ -0.18
DDB1-218ENST00000540784 ZGRF1Q86YA3 2104 aa13.95□□□□□ -0.18
DDB1-218ENST00000540784 RBM45Q8IUH3 476 aaKnown RBP13.95□□□□□ -0.18
DDB1-218ENST00000540784 OR6T1Q8NGN1 323 aa13.95□□□□□ -0.18
DDB1-218ENST00000540784 OR10Q1Q8NGQ4 319 aa13.95□□□□□ -0.18
DDB1-218ENST00000540784 SLC25A43Q8WUT9 341 aaPredicted RBP13.95□□□□□ -0.18
DDB1-218ENST00000540784 OSTF1Q92882 214 aa13.95□□□□□ -0.18
DDB1-218ENST00000540784 SLC7A6OSQ96CW6 309 aaPredicted RBP13.95□□□□□ -0.18
DDB1-218ENST00000540784 KLHL15Q96M94 604 aa13.95□□□□□ -0.18
DDB1-218ENST00000540784 PCDHAC1Q9H158 963 aa13.95□□□□□ -0.18
DDB1-218ENST00000540784 TIGARQ9NQ88 270 aa13.95□□□□□ -0.18
DDB1-218ENST00000540784 PAQR5Q9NXK6 330 aaPredicted RBP13.95□□□□□ -0.18
DDB1-218ENST00000540784 SELENONQ9NZV5 590 aa13.95□□□□□ -0.18
DDB1-218ENST00000540784 TESQ9UGI8 421 aaKnown RBP13.95□□□□□ -0.18
DDB1-218ENST00000540784 CHRNA9Q9UGM1 479 aa13.95□□□□□ -0.18
DDB1-218ENST00000540784 MAGEL2Q9UJ55 1249 aa13.95□□□□□ -0.18
DDB1-218ENST00000540784 RPS6KA6Q9UK32 745 aa13.95□□□□□ -0.18
DDB1-218ENST00000540784 NBASA2RRP1 2371 aa13.95□□□□□ -0.18
DDB1-218ENST00000540784 ESPL1Q14674 2120 aa13.94□□□□□ -0.18
DDB1-218ENST00000540784 A0A0J9YW62 118 aa13.94□□□□□ -0.18
DDB1-218ENST00000540784 CD8B2A6NJW9 211 aa13.94□□□□□ -0.18
DDB1-218ENST00000540784 CLCA1A8K7I4 914 aa13.94□□□□□ -0.18
DDB1-218ENST00000540784 TMEM229AB2RXF0 380 aa13.94□□□□□ -0.18
DDB1-218ENST00000540784 EBAG9O00559 213 aa13.94□□□□□ -0.18
DDB1-218ENST00000540784 TNFSF11O14788 317 aa13.94□□□□□ -0.18
DDB1-218ENST00000540784 TPST2O60704 377 aa13.94□□□□□ -0.18
DDB1-218ENST00000540784 FMO6PO60774 539 aa13.94□□□□□ -0.18
DDB1-218ENST00000540784 SEMA7AO75326 666 aa13.94□□□□□ -0.18
DDB1-218ENST00000540784 GLI4P10075 376 aa13.94□□□□□ -0.18
DDB1-218ENST00000540784 HTR2AP28223 471 aa13.94□□□□□ -0.18
DDB1-218ENST00000540784 SLC7A1P30825 629 aa13.94□□□□□ -0.18
DDB1-218ENST00000540784 EIF1AXP47813 144 aaKnown RBP13.94□□□□□ -0.18
DDB1-218ENST00000540784 OR1E2P47887 323 aa13.94□□□□□ -0.18
DDB1-218ENST00000540784 CLK1P49759 484 aaKnown RBP13.94□□□□□ -0.18
DDB1-218ENST00000540784 BNIP2Q12982 314 aa13.94□□□□□ -0.18
DDB1-218ENST00000540784 OR1Q1Q15612 314 aa13.94□□□□□ -0.18
DDB1-218ENST00000540784 FXNQ16595 210 aa13.94□□□□□ -0.18
DDB1-218ENST00000540784 ACSF3Q4G176 576 aaPredicted RBP13.94□□□□□ -0.18
DDB1-218ENST00000540784 NSUN5P2Q63ZY6 315 aa13.94□□□□□ -0.18
DDB1-218ENST00000540784 C3orf33Q6P1S2 294 aa13.94□□□□□ -0.18
DDB1-218ENST00000540784 ULK3Q6PHR2 472 aa13.94□□□□□ -0.18
DDB1-218ENST00000540784 LACC1Q8IV20 430 aa13.94□□□□□ -0.18
DDB1-218ENST00000540784 OR4D11Q8NGI4 311 aa13.94□□□□□ -0.18
DDB1-218ENST00000540784 OR2V1Q8NHB1 315 aa13.94□□□□□ -0.18
DDB1-218ENST00000540784 RNF217Q8TC41 542 aa13.94□□□□□ -0.18
DDB1-218ENST00000540784 DNAJA4Q8WW22 397 aaPredicted RBP13.94□□□□□ -0.18
DDB1-218ENST00000540784 DMRTA2Q96SC8 542 aa13.94□□□□□ -0.18
DDB1-218ENST00000540784 TTYH2Q9BSA4 534 aa13.94□□□□□ -0.18
DDB1-218ENST00000540784 DCAF13Q9NV06 445 aaKnown RBP13.94□□□□□ -0.18
DDB1-218ENST00000540784 ERRFI1Q9UJM3 462 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms