RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 PRDX1Q06830 199 aaKnown RBP12.88□□□□□ -0.35
SCNN1A-215ENST00000540037 GARNL3Q5VVW2 1013 aa12.88□□□□□ -0.35
SCNN1A-215ENST00000540037 APOOLQ6UXV4 268 aa12.88□□□□□ -0.35
SCNN1A-215ENST00000540037 KREMEN2Q8NCW0 462 aa12.88□□□□□ -0.35
SCNN1A-215ENST00000540037 CNOT9Q92600 299 aaKnown RBP12.88□□□□□ -0.35
SCNN1A-215ENST00000540037 FBXW5Q969U6 566 aa12.88□□□□□ -0.35
SCNN1A-215ENST00000540037 ZNF681Q96N22 645 aa12.88□□□□□ -0.35
SCNN1A-215ENST00000540037 LRRC3BQ96PB8 259 aa12.88□□□□□ -0.35
SCNN1A-215ENST00000540037 ANKRD10Q9NXR5 420 aa12.88□□□□□ -0.35
SCNN1A-215ENST00000540037 ZNF223Q9UK11 482 aaPredicted RBP12.88□□□□□ -0.35
SCNN1A-215ENST00000540037 PLEKHM1Q9Y4G2 1056 aa12.88□□□□□ -0.35
SCNN1A-215ENST00000540037 IDSB3KWA1 339 aa12.88□□□□□ -0.35
SCNN1A-215ENST00000540037 FLRT2O43155 660 aa12.88□□□□□ -0.35
SCNN1A-215ENST00000540037 LILRB3O75022 631 aa12.88□□□□□ -0.35
SCNN1A-215ENST00000540037 SIX6O95475 246 aa12.88□□□□□ -0.35
SCNN1A-215ENST00000540037 LPLP06858 475 aa12.88□□□□□ -0.35
SCNN1A-215ENST00000540037 MPIP34949 423 aa12.88□□□□□ -0.35
SCNN1A-215ENST00000540037 GBX2P52951 348 aaPredicted RBP12.88□□□□□ -0.35
SCNN1A-215ENST00000540037 DUSP5Q16690 384 aa12.88□□□□□ -0.35
SCNN1A-215ENST00000540037 METRNLQ641Q3 311 aa12.88□□□□□ -0.35
SCNN1A-215ENST00000540037 C3P1Q6ZMU1 363 aa12.88□□□□□ -0.35
SCNN1A-215ENST00000540037 GJD3Q8N144 294 aa12.88□□□□□ -0.35
SCNN1A-215ENST00000540037 LNX2Q8N448 690 aa12.88□□□□□ -0.35
SCNN1A-215ENST00000540037 INSM2Q96T92 566 aaPredicted RBP12.88□□□□□ -0.35
SCNN1A-215ENST00000540037 ACTRT3Q9BYD9 372 aa12.88□□□□□ -0.35
SCNN1A-215ENST00000540037 SEMA4CQ9C0C4 833 aa12.88□□□□□ -0.35
SCNN1A-215ENST00000540037 FN3KQ9H479 309 aa12.88□□□□□ -0.35
SCNN1A-215ENST00000540037 SLC6A20Q9NP91 592 aa12.88□□□□□ -0.35
SCNN1A-215ENST00000540037 POT1Q9NUX5 634 aa12.88□□□□□ -0.35
SCNN1A-215ENST00000540037 APOBEC3BQ9UH17 382 aaKnown RBP12.88□□□□□ -0.35
SCNN1A-215ENST00000540037 CAMK2AQ9UQM7 478 aa12.88□□□□□ -0.35
SCNN1A-215ENST00000540037 MFSD2BA6NFX1 497 aa12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 ANKRD61A6NGH8 418 aa12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 H3BUI4 141 aa12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 INHAP05111 366 aa12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 NRG3P56975 720 aa12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 UBE2MP61081 183 aaKnown RBP12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 RPS11P62280 158 aaKnown RBP eCLIP12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 PITPNAQ00169 270 aa12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 ID2Q02363 134 aa12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 MRM1Q6IN84 353 aaKnown RBP12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 FAM198BQ6UWH4 519 aa12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 KCT2Q8NC54 265 aa12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 GRHL3Q8TE85 626 aa12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 TMEM239Q8WW34 195 aa12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 GFI1Q99684 422 aa12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 ZNF559Q9BR84 538 aa12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 CMC2Q9NRP2 79 aa12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 KCNE5Q9UJ90 142 aa12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 PCDHGA5Q9Y5G8 931 aa12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 NPFFR2Q9Y5X5 522 aa12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 CLTBP09497 229 aa12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 PSMB1P20618 241 aaKnown RBP12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 GDI2P50395 445 aaKnown RBP12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 ERVK-21P61565 698 aa12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 TRA2BP62995 288 aaKnown RBP12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 SREBF2Q12772 1141 aa12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 HTR4Q13639 388 aa12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 ARHGAP19Q14CB8 494 aa12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 OR1Q1Q15612 314 aa12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 HACD4Q5VWC8 232 aa12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 SLC22A10Q63ZE4 541 aa12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 CMIPQ8IY22 773 aa12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 ZNF433Q8N7K0 673 aaPredicted RBP12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 PELI1Q96FA3 418 aa12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 OR1F2PQ96R84 312 aa12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 MEPEQ9NQ76 525 aaPredicted RBP12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 TMEM74BQ9NUR3 256 aa12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 KCNK6Q9Y257 313 aa12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 PCDHGA9Q9Y5G4 932 aaKnown RBP12.87□□□□□ -0.35
SCNN1A-215ENST00000540037 PLSCR5A0PG75 271 aa12.86□□□□□ -0.35
SCNN1A-215ENST00000540037 ACOD1A6NK06 481 aa12.86□□□□□ -0.35
SCNN1A-215ENST00000540037 SLC22A31A6NKX4 558 aa12.86□□□□□ -0.35
SCNN1A-215ENST00000540037 L7N2F9 121 aa12.86□□□□□ -0.35
SCNN1A-215ENST00000540037 VEGFDO43915 354 aa12.86□□□□□ -0.35
SCNN1A-215ENST00000540037 SLC35G4P0C7Q5 338 aa12.86□□□□□ -0.35
SCNN1A-215ENST00000540037 NT5EP21589 574 aa12.86□□□□□ -0.35
SCNN1A-215ENST00000540037 NUP62P37198 522 aaPredicted RBP12.86□□□□□ -0.35
SCNN1A-215ENST00000540037 LINC00303Q3SY05 128 aa12.86□□□□□ -0.35
SCNN1A-215ENST00000540037 UXS1Q8NBZ7 420 aa12.86□□□□□ -0.35
SCNN1A-215ENST00000540037 ZNRF4Q8WWF5 429 aa12.86□□□□□ -0.35
SCNN1A-215ENST00000540037 VWCEQ96DN2 955 aa12.86□□□□□ -0.35
SCNN1A-215ENST00000540037 BPIFA2Q96DR5 249 aa12.86□□□□□ -0.35
SCNN1A-215ENST00000540037 NPDC1Q9NQX5 325 aaPredicted RBP12.86□□□□□ -0.35
SCNN1A-215ENST00000540037 SPHK1Q9NYA1 384 aa12.86□□□□□ -0.35
SCNN1A-215ENST00000540037 SIGLEC7Q9Y286 467 aa12.86□□□□□ -0.35
SCNN1A-215ENST00000540037 SLC22A23A1A5C7 686 aa12.86□□□□□ -0.35
SCNN1A-215ENST00000540037 CARNS1A5YM72 827 aa12.86□□□□□ -0.35
SCNN1A-215ENST00000540037 NMBP08949 121 aa12.86□□□□□ -0.35
SCNN1A-215ENST00000540037 SLC2A5P22732 501 aa12.86□□□□□ -0.35
SCNN1A-215ENST00000540037 DCTDP32321 178 aa12.86□□□□□ -0.35
SCNN1A-215ENST00000540037 ST8SIA6P61647 398 aa12.86□□□□□ -0.35
SCNN1A-215ENST00000540037 BTN3A2P78410 334 aa12.86□□□□□ -0.35
SCNN1A-215ENST00000540037 ZIC1Q15915 447 aa12.86□□□□□ -0.35
SCNN1A-215ENST00000540037 C2orf68Q2NKX9 166 aa12.86□□□□□ -0.35
SCNN1A-215ENST00000540037 MRPL2Q5T653 305 aaKnown RBP12.86□□□□□ -0.35
SCNN1A-215ENST00000540037 MFSD12Q6NUT3 480 aa12.86□□□□□ -0.35
SCNN1A-215ENST00000540037 CD99L2Q8TCZ2 262 aa12.86□□□□□ -0.35
SCNN1A-215ENST00000540037 SLC25A38Q96DW6 304 aa12.86□□□□□ -0.35
SCNN1A-215ENST00000540037 SIPA1Q96FS4 1042 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms