RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 RNF220Q5VTB9 566 aa16.37■□□□□ 0.21
SNRPA1-203ENST00000540017 REEP3Q6NUK4 255 aa16.37■□□□□ 0.21
SNRPA1-203ENST00000540017 C3orf33Q6P1S2 294 aa16.37■□□□□ 0.21
SNRPA1-203ENST00000540017 COMTD1Q86VU5 262 aa16.37■□□□□ 0.21
SNRPA1-203ENST00000540017 SNX32Q86XE0 403 aa16.37■□□□□ 0.21
SNRPA1-203ENST00000540017 PTOV1Q86YD1 416 aa16.37■□□□□ 0.21
SNRPA1-203ENST00000540017 SPATA9Q9BWV2 254 aa16.37■□□□□ 0.21
SNRPA1-203ENST00000540017 PRRG4Q9BZD6 226 aa16.37■□□□□ 0.21
SNRPA1-203ENST00000540017 PACSIN3Q9UKS6 424 aa16.37■□□□□ 0.21
SNRPA1-203ENST00000540017 MCTS1Q9ULC4 181 aaKnown RBP16.37■□□□□ 0.21
SNRPA1-203ENST00000540017 CORO2BQ9UQ03 480 aa16.37■□□□□ 0.21
SNRPA1-203ENST00000540017 LOC100653049A0A140TA62 436 aa16.36■□□□□ 0.21
SNRPA1-203ENST00000540017 GJE1A6NN92 205 aa16.36■□□□□ 0.21
SNRPA1-203ENST00000540017 FXYD1O00168 92 aa16.36■□□□□ 0.21
SNRPA1-203ENST00000540017 FAAHO00519 579 aa16.36■□□□□ 0.21
SNRPA1-203ENST00000540017 KRT34O76011 436 aa16.36■□□□□ 0.21
SNRPA1-203ENST00000540017 CGAP01215 116 aa16.36■□□□□ 0.21
SNRPA1-203ENST00000540017 FCGR2AP12318 317 aa16.36■□□□□ 0.21
SNRPA1-203ENST00000540017 ETS2P15036 469 aa16.36■□□□□ 0.21
SNRPA1-203ENST00000540017 APOBEC1P41238 236 aaKnown RBP16.36■□□□□ 0.21
SNRPA1-203ENST00000540017 SCARB2Q14108 478 aa16.36■□□□□ 0.21
SNRPA1-203ENST00000540017 ZNF311Q5JNZ3 666 aa16.36■□□□□ 0.21
SNRPA1-203ENST00000540017 REP15Q6BDI9 236 aa16.36■□□□□ 0.21
SNRPA1-203ENST00000540017 GRINAQ7Z429 371 aa16.36■□□□□ 0.21
SNRPA1-203ENST00000540017 OR5B2Q96R09 309 aa16.36■□□□□ 0.21
SNRPA1-203ENST00000540017 ELAC2Q9BQ52 826 aaKnown RBP16.36■□□□□ 0.21
SNRPA1-203ENST00000540017 OPN3Q9H1Y3 402 aaPredicted RBP16.36■□□□□ 0.21
SNRPA1-203ENST00000540017 PIGMQ9H3S5 423 aa16.36■□□□□ 0.21
SNRPA1-203ENST00000540017 KAT8Q9H7Z6 458 aaKnown RBP16.36■□□□□ 0.21
SNRPA1-203ENST00000540017 OSGIN1Q9UJX0 560 aa16.36■□□□□ 0.21
SNRPA1-203ENST00000540017 ZNF232Q9UNY5 417 aa16.36■□□□□ 0.21
SNRPA1-203ENST00000540017 IFT52Q9Y366 437 aa16.36■□□□□ 0.21
SNRPA1-203ENST00000540017 IGHV3-15A0A0B4J1V0 119 aa16.35■□□□□ 0.21
SNRPA1-203ENST00000540017 A8MXE2 369 aa16.35■□□□□ 0.21
SNRPA1-203ENST00000540017 FRS3O43559 492 aa16.35■□□□□ 0.21
SNRPA1-203ENST00000540017 TPST1O60507 370 aa16.35■□□□□ 0.21
SNRPA1-203ENST00000540017 GCM2O75603 506 aaPredicted RBP16.35■□□□□ 0.21
SNRPA1-203ENST00000540017 SMNDC1O75940 238 aaKnown RBP eCLIP16.35■□□□□ 0.21
SNRPA1-203ENST00000540017 CCNA2P20248 432 aa16.35■□□□□ 0.21
SNRPA1-203ENST00000540017 ENPP1P22413 925 aa16.35■□□□□ 0.21
SNRPA1-203ENST00000540017 SLC7A1P30825 629 aa16.35■□□□□ 0.21
SNRPA1-203ENST00000540017 GZMMP51124 257 aa16.35■□□□□ 0.21
SNRPA1-203ENST00000540017 HOXC5Q00444 222 aa16.35■□□□□ 0.21
SNRPA1-203ENST00000540017 TRMT5Q32P41 509 aaKnown RBP16.35■□□□□ 0.21
SNRPA1-203ENST00000540017 GLIPR1L2Q4G1C9 344 aa16.35■□□□□ 0.21
SNRPA1-203ENST00000540017 SYT14P1Q58G82 188 aa16.35■□□□□ 0.21
SNRPA1-203ENST00000540017 NANOGP8Q6NSW7 305 aa16.35■□□□□ 0.21
SNRPA1-203ENST00000540017 FAM214BQ7L5A3 538 aa16.35■□□□□ 0.21
SNRPA1-203ENST00000540017 SERPINA11Q86U17 422 aa16.35■□□□□ 0.21
SNRPA1-203ENST00000540017 ZNF440Q8IYI8 595 aa16.35■□□□□ 0.21
SNRPA1-203ENST00000540017 ABHD3Q8WU67 409 aa16.35■□□□□ 0.21
SNRPA1-203ENST00000540017 CPNE4Q96A23 557 aaPredicted RBP16.35■□□□□ 0.21
SNRPA1-203ENST00000540017 DNAJA3Q96EY1 480 aa16.35■□□□□ 0.21
SNRPA1-203ENST00000540017 ARL5BQ96KC2 179 aa16.35■□□□□ 0.21
SNRPA1-203ENST00000540017 RBM24Q9BX46 236 aaKnown RBP16.35■□□□□ 0.21
SNRPA1-203ENST00000540017 OR11A1Q9GZK7 315 aa16.35■□□□□ 0.21
SNRPA1-203ENST00000540017 ADAM19Q9H013 955 aa16.35■□□□□ 0.21
SNRPA1-203ENST00000540017 NANOGQ9H9S0 305 aa16.35■□□□□ 0.21
SNRPA1-203ENST00000540017 SERINC1Q9NRX5 453 aa16.35■□□□□ 0.21
SNRPA1-203ENST00000540017 GALNT8Q9NY28 637 aa16.35■□□□□ 0.21
SNRPA1-203ENST00000540017 CHRNA9Q9UGM1 479 aa16.35■□□□□ 0.21
SNRPA1-203ENST00000540017 CAPN7Q9Y6W3 813 aa16.35■□□□□ 0.21
SNRPA1-203ENST00000540017 APCP25054 2843 aa16.34■□□□□ 0.21
SNRPA1-203ENST00000540017 TMED7-TICAM2A0A0A6YYA0 188 aa16.34■□□□□ 0.21
SNRPA1-203ENST00000540017 DYNC1I1O14576 645 aa16.34■□□□□ 0.21
SNRPA1-203ENST00000540017 MRASO14807 208 aa16.34■□□□□ 0.21
SNRPA1-203ENST00000540017 SS18L1O75177 396 aaPredicted RBP16.34■□□□□ 0.21
SNRPA1-203ENST00000540017 DRD4P21917 467 aa16.34■□□□□ 0.21
SNRPA1-203ENST00000540017 SLC6A2P23975 617 aa16.34■□□□□ 0.21
SNRPA1-203ENST00000540017 TACR3P29371 465 aa16.34■□□□□ 0.21
SNRPA1-203ENST00000540017 AQP1P29972 269 aa16.34■□□□□ 0.21
SNRPA1-203ENST00000540017 ADSLP30566 484 aaPredicted RBP16.34■□□□□ 0.21
SNRPA1-203ENST00000540017 LSP1P33241 339 aa16.34■□□□□ 0.21
SNRPA1-203ENST00000540017 SLC1A3P43003 542 aa16.34■□□□□ 0.21
SNRPA1-203ENST00000540017 RAC3P60763 192 aa16.34■□□□□ 0.21
SNRPA1-203ENST00000540017 RABL3Q5HYI8 236 aa16.34■□□□□ 0.21
SNRPA1-203ENST00000540017 EEF1A1P5Q5VTE0 462 aa16.34■□□□□ 0.21
SNRPA1-203ENST00000540017 ZNF474Q6S9Z5 364 aaPredicted RBP16.34■□□□□ 0.21
SNRPA1-203ENST00000540017 GDF7Q7Z4P5 450 aa16.34■□□□□ 0.21
SNRPA1-203ENST00000540017 SPATA21Q7Z572 469 aa16.34■□□□□ 0.21
SNRPA1-203ENST00000540017 NET1Q7Z628 596 aaPredicted RBP16.34■□□□□ 0.21
SNRPA1-203ENST00000540017 ZZZ3Q8IYH5 903 aa16.34■□□□□ 0.21
SNRPA1-203ENST00000540017 POU5F2Q8N7G0 328 aa16.34■□□□□ 0.21
SNRPA1-203ENST00000540017 RNF128Q8TEB7 428 aa16.34■□□□□ 0.21
SNRPA1-203ENST00000540017 LRRC58Q96CX6 371 aa16.34■□□□□ 0.21
SNRPA1-203ENST00000540017 GMPPAQ96IJ6 420 aaPredicted RBP16.34■□□□□ 0.21
SNRPA1-203ENST00000540017 TIGARQ9NQ88 270 aa16.34■□□□□ 0.21
SNRPA1-203ENST00000540017 MRGBPQ9NV56 204 aa16.34■□□□□ 0.21
SNRPA1-203ENST00000540017 TMED7Q9Y3B3 224 aa16.34■□□□□ 0.21
SNRPA1-203ENST00000540017 TMEM72A0PK05 275 aa16.33■□□□□ 0.2
SNRPA1-203ENST00000540017 MSTNO14793 375 aa16.33■□□□□ 0.2
SNRPA1-203ENST00000540017 TFPIP10646 304 aa16.33■□□□□ 0.2
SNRPA1-203ENST00000540017 CPA2P48052 419 aa16.33■□□□□ 0.2
SNRPA1-203ENST00000540017 DIO1P49895 249 aa16.33■□□□□ 0.2
SNRPA1-203ENST00000540017 POLR2HP52434 150 aaKnown RBP16.33■□□□□ 0.2
SNRPA1-203ENST00000540017 KRTAP10-9P60411 292 aa16.33■□□□□ 0.2
SNRPA1-203ENST00000540017 CYP51A1Q16850 503 aa16.33■□□□□ 0.2
SNRPA1-203ENST00000540017 MMEL1Q495T6 779 aa16.33■□□□□ 0.2
SNRPA1-203ENST00000540017 COQ5Q5HYK3 327 aa16.33■□□□□ 0.2
SNRPA1-203ENST00000540017 TMPPEQ6ZT21 453 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms