RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 TMPPEQ6ZT21 453 aa11.06□□□□□ -0.64
VAMP1-206ENST00000538970 EIF3MQ7L2H7 374 aaKnown RBP11.06□□□□□ -0.64
VAMP1-206ENST00000538970 C16orf62Q7Z3J2 963 aa11.06□□□□□ -0.64
VAMP1-206ENST00000538970 GALNT5Q7Z7M9 940 aa11.06□□□□□ -0.64
VAMP1-206ENST00000538970 ZNF781Q8N8C0 355 aa11.06□□□□□ -0.64
VAMP1-206ENST00000538970 MAPK1IP1LQ8NDC0 245 aa11.06□□□□□ -0.64
VAMP1-206ENST00000538970 OR8J2Q8NGG1 315 aa11.06□□□□□ -0.64
VAMP1-206ENST00000538970 OR4A15Q8NGL6 344 aa11.06□□□□□ -0.64
VAMP1-206ENST00000538970 SLC25A43Q8WUT9 341 aaPredicted RBP11.06□□□□□ -0.64
VAMP1-206ENST00000538970 OIT3Q8WWZ8 545 aa11.06□□□□□ -0.64
VAMP1-206ENST00000538970 TMEM234Q8WY98 164 aa11.06□□□□□ -0.64
VAMP1-206ENST00000538970 GTPBP3Q969Y2 492 aaKnown RBP11.06□□□□□ -0.64
VAMP1-206ENST00000538970 ZNF775Q96BV0 537 aaPredicted RBP11.06□□□□□ -0.64
VAMP1-206ENST00000538970 PKNOX2Q96KN3 472 aa11.06□□□□□ -0.64
VAMP1-206ENST00000538970 TRAF4Q9BUZ4 470 aaPredicted RBP11.06□□□□□ -0.64
VAMP1-206ENST00000538970 SLCO5A1Q9H2Y9 848 aa11.06□□□□□ -0.64
VAMP1-206ENST00000538970 SERINC1Q9NRX5 453 aa11.06□□□□□ -0.64
VAMP1-206ENST00000538970 ACER3Q9NUN7 267 aa11.06□□□□□ -0.64
VAMP1-206ENST00000538970 EXD2Q9NVH0 621 aa11.06□□□□□ -0.64
VAMP1-206ENST00000538970 NPAP1Q9NZP6 1156 aa11.06□□□□□ -0.64
VAMP1-206ENST00000538970 IGKV3D-15A0A087WSY6 115 aa11.05□□□□□ -0.64
VAMP1-206ENST00000538970 GOLGA8QA0A0J9YX86 632 aa11.05□□□□□ -0.64
VAMP1-206ENST00000538970 GOLGA8OA6NCC3 632 aa11.05□□□□□ -0.64
VAMP1-206ENST00000538970 ZNF716A6NP11 495 aa11.05□□□□□ -0.64
VAMP1-206ENST00000538970 SHISA9B4DS77 424 aa11.05□□□□□ -0.64
VAMP1-206ENST00000538970 GOLGA8NF8WBI6 632 aa11.05□□□□□ -0.64
VAMP1-206ENST00000538970 SULT2B1O00204 365 aa11.05□□□□□ -0.64
VAMP1-206ENST00000538970 ITM2AO43736 263 aa11.05□□□□□ -0.64
VAMP1-206ENST00000538970 RAMP1O60894 148 aa11.05□□□□□ -0.64
VAMP1-206ENST00000538970 AGR2O95994 175 aa11.05□□□□□ -0.64
VAMP1-206ENST00000538970 IDUAP35475 653 aa11.05□□□□□ -0.64
VAMP1-206ENST00000538970 CSNK2A1P68400 391 aaPredicted RBP11.05□□□□□ -0.64
VAMP1-206ENST00000538970 PLAURQ03405 335 aa11.05□□□□□ -0.64
VAMP1-206ENST00000538970 DMTNQ08495 405 aa11.05□□□□□ -0.64
VAMP1-206ENST00000538970 FUT5Q11128 374 aa11.05□□□□□ -0.64
VAMP1-206ENST00000538970 FAPQ12884 760 aa11.05□□□□□ -0.64
VAMP1-206ENST00000538970 PDK3Q15120 406 aa11.05□□□□□ -0.64
VAMP1-206ENST00000538970 TIMM23BQ5SRD1 257 aa11.05□□□□□ -0.64
VAMP1-206ENST00000538970 PRR14LQ5THK1 2151 aa11.05□□□□□ -0.64
VAMP1-206ENST00000538970 DNM1P46Q6ZS02 220 aa11.05□□□□□ -0.64
VAMP1-206ENST00000538970 SSX8Q7RTT4 187 aa11.05□□□□□ -0.64
VAMP1-206ENST00000538970 DTX2Q86UW9 622 aa11.05□□□□□ -0.64
VAMP1-206ENST00000538970 ANKRD46Q86W74 232 aa11.05□□□□□ -0.64
VAMP1-206ENST00000538970 NUDCD3Q8IVD9 361 aa11.05□□□□□ -0.64
VAMP1-206ENST00000538970 AENQ8WTP8 325 aaKnown RBP11.05□□□□□ -0.64
VAMP1-206ENST00000538970 PPP1R36Q96LQ0 422 aa11.05□□□□□ -0.64
VAMP1-206ENST00000538970 CCDC106Q9BWC9 280 aa11.05□□□□□ -0.64
VAMP1-206ENST00000538970 AKTIPQ9H8T0 292 aa11.05□□□□□ -0.64
VAMP1-206ENST00000538970 POLE3Q9NRF9 147 aa11.05□□□□□ -0.64
VAMP1-206ENST00000538970 EMC3Q9P0I2 261 aa11.05□□□□□ -0.64
VAMP1-206ENST00000538970 PCDHGB4Q9UN71 923 aa11.05□□□□□ -0.64
VAMP1-206ENST00000538970 SLC35A3Q9Y2D2 325 aa11.05□□□□□ -0.64
VAMP1-206ENST00000538970 WDR45Q9Y484 360 aa11.05□□□□□ -0.64
VAMP1-206ENST00000538970 ANK3Q12955 4377 aaKnown RBP11.04□□□□□ -0.64
VAMP1-206ENST00000538970 OR5H1A6NKK0 313 aa11.04□□□□□ -0.64
VAMP1-206ENST00000538970 ABCD4O14678 606 aa11.04□□□□□ -0.64
VAMP1-206ENST00000538970 CRLF1O75462 422 aa11.04□□□□□ -0.64
VAMP1-206ENST00000538970 PGM3O95394 542 aa11.04□□□□□ -0.64
VAMP1-206ENST00000538970 CD8AP01732 235 aa11.04□□□□□ -0.64
VAMP1-206ENST00000538970 SERPINE1P05121 402 aa11.04□□□□□ -0.64
VAMP1-206ENST00000538970 OR12D1P0DN82 309 aa11.04□□□□□ -0.64
VAMP1-206ENST00000538970 GGT1P19440 569 aa11.04□□□□□ -0.64
VAMP1-206ENST00000538970 UQCRC2P22695 453 aa11.04□□□□□ -0.64
VAMP1-206ENST00000538970 ACVR1BP36896 505 aa11.04□□□□□ -0.64
VAMP1-206ENST00000538970 APOBEC1P41238 236 aaKnown RBP11.04□□□□□ -0.64
VAMP1-206ENST00000538970 CDH11P55287 796 aa11.04□□□□□ -0.64
VAMP1-206ENST00000538970 PHC1P78364 1004 aa11.04□□□□□ -0.64
VAMP1-206ENST00000538970 ATAD3BQ5T9A4 648 aa11.04□□□□□ -0.64
VAMP1-206ENST00000538970 FBXW9Q5XUX1 488 aa11.04□□□□□ -0.64
VAMP1-206ENST00000538970 AP1ARQ63HQ0 302 aa11.04□□□□□ -0.64
VAMP1-206ENST00000538970 SAXO2Q658L1 398 aa11.04□□□□□ -0.64
VAMP1-206ENST00000538970 TNFAIP8L2Q6P589 184 aaPredicted RBP11.04□□□□□ -0.64
VAMP1-206ENST00000538970 EMBQ6PCB8 327 aa11.04□□□□□ -0.64
VAMP1-206ENST00000538970 FRRS1Q6ZNA5 592 aa11.04□□□□□ -0.64
VAMP1-206ENST00000538970 MTDHQ86UE4 582 aaKnown RBP11.04□□□□□ -0.64
VAMP1-206ENST00000538970 P2RY8Q86VZ1 359 aa11.04□□□□□ -0.64
VAMP1-206ENST00000538970 ZNF100Q8IYN0 542 aa11.04□□□□□ -0.64
VAMP1-206ENST00000538970 ZNF433Q8N7K0 673 aaPredicted RBP11.04□□□□□ -0.64
VAMP1-206ENST00000538970 RAB8BQ92930 207 aa11.04□□□□□ -0.64
VAMP1-206ENST00000538970 TESCQ96BS2 214 aa11.04□□□□□ -0.64
VAMP1-206ENST00000538970 ROPN1LQ96C74 230 aa11.04□□□□□ -0.64
VAMP1-206ENST00000538970 MUCL1Q96DR8 90 aa11.04□□□□□ -0.64
VAMP1-206ENST00000538970 TRIM44Q96DX7 344 aaPredicted RBP11.04□□□□□ -0.64
VAMP1-206ENST00000538970 TMEM109Q9BVC6 243 aa11.04□□□□□ -0.64
VAMP1-206ENST00000538970 REG4Q9BYZ8 158 aa11.04□□□□□ -0.64
VAMP1-206ENST00000538970 DPY30Q9C005 99 aa11.04□□□□□ -0.64
VAMP1-206ENST00000538970 GRIP2Q9C0E4 1043 aa11.04□□□□□ -0.64
VAMP1-206ENST00000538970 SAP130Q9H0E3 1048 aa11.04□□□□□ -0.64
VAMP1-206ENST00000538970 CTPS2Q9NRF8 586 aa11.04□□□□□ -0.64
VAMP1-206ENST00000538970 CISD1Q9NZ45 108 aaKnown RBP11.04□□□□□ -0.64
VAMP1-206ENST00000538970 CHRNA9Q9UGM1 479 aa11.04□□□□□ -0.64
VAMP1-206ENST00000538970 SPIN1Q9Y657 262 aaPredicted RBP11.04□□□□□ -0.64
VAMP1-206ENST00000538970 PRSS51A0A1B0GVH4 220 aa11.03□□□□□ -0.64
VAMP1-206ENST00000538970 WDR91A4D1P6 747 aa11.03□□□□□ -0.64
VAMP1-206ENST00000538970 ANKRD28O15084 1053 aa11.03□□□□□ -0.64
VAMP1-206ENST00000538970 DNPH1O43598 174 aa11.03□□□□□ -0.64
VAMP1-206ENST00000538970 NDUFS7O75251 213 aa11.03□□□□□ -0.64
VAMP1-206ENST00000538970 RAD51DO75771 328 aa11.03□□□□□ -0.64
VAMP1-206ENST00000538970 PMS2P2O95744 297 aa11.03□□□□□ -0.64
VAMP1-206ENST00000538970 IGHV3-9P01782 118 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms