RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 SULT1A3P0DMM9 295 aa16.62■□□□□ 0.25
RAB40C-203ENST00000535977 SULT1A4P0DMN0 295 aa16.62■□□□□ 0.25
RAB40C-203ENST00000535977 SMIM10L1P0DMW3 83 aa16.62■□□□□ 0.25
RAB40C-203ENST00000535977 GAAP10253 952 aa16.62■□□□□ 0.25
RAB40C-203ENST00000535977 ELK1P19419 428 aa16.62■□□□□ 0.25
RAB40C-203ENST00000535977 LCN1P31025 176 aa16.62■□□□□ 0.25
RAB40C-203ENST00000535977 MAT2AP31153 395 aaKnown RBP16.62■□□□□ 0.25
RAB40C-203ENST00000535977 ST3GAL2Q16842 350 aa16.62■□□□□ 0.25
RAB40C-203ENST00000535977 OR2G6Q5TZ20 316 aa16.62■□□□□ 0.25
RAB40C-203ENST00000535977 MBOAT2Q6ZWT7 520 aa16.62■□□□□ 0.25
RAB40C-203ENST00000535977 OR2L13Q8N349 312 aa16.62■□□□□ 0.25
RAB40C-203ENST00000535977 SLC22A8Q8TCC7 542 aa16.62■□□□□ 0.25
RAB40C-203ENST00000535977 KAT2AQ92830 837 aa16.62■□□□□ 0.25
RAB40C-203ENST00000535977 SMIM10Q96HG1 83 aa16.62■□□□□ 0.25
RAB40C-203ENST00000535977 MCHR1Q99705 422 aa16.62■□□□□ 0.25
RAB40C-203ENST00000535977 ESRP2Q9H6T0 727 aaKnown RBP16.62■□□□□ 0.25
RAB40C-203ENST00000535977 CD93Q9NPY3 652 aa16.62■□□□□ 0.25
RAB40C-203ENST00000535977 LINC00587B1AMM8 73 aa16.62■□□□□ 0.25
RAB40C-203ENST00000535977 APOC3P02656 99 aa16.62■□□□□ 0.25
RAB40C-203ENST00000535977 FGF2P09038 288 aa16.62■□□□□ 0.25
RAB40C-203ENST00000535977 GABRA5P31644 462 aa16.62■□□□□ 0.25
RAB40C-203ENST00000535977 NFATC4Q14934 902 aa16.62■□□□□ 0.25
RAB40C-203ENST00000535977 NLRC3Q7RTR2 1065 aa16.62■□□□□ 0.25
RAB40C-203ENST00000535977 POGLUT1Q8NBL1 392 aa16.62■□□□□ 0.25
RAB40C-203ENST00000535977 BVESQ8NE79 360 aa16.62■□□□□ 0.25
RAB40C-203ENST00000535977 COQ8AQ8NI60 647 aa16.62■□□□□ 0.25
RAB40C-203ENST00000535977 RFT1Q96AA3 541 aa16.62■□□□□ 0.25
RAB40C-203ENST00000535977 MYADMQ96S97 322 aa16.62■□□□□ 0.25
RAB40C-203ENST00000535977 PFDN2Q9UHV9 154 aa16.62■□□□□ 0.25
RAB40C-203ENST00000535977 ZNF443Q9Y2A4 671 aaPredicted RBP16.62■□□□□ 0.25
RAB40C-203ENST00000535977 MDC1Q14676 2089 aaKnown RBP16.62■□□□□ 0.25
RAB40C-203ENST00000535977 TP53BP1Q12888 1972 aaPredicted RBP16.62■□□□□ 0.25
RAB40C-203ENST00000535977 B3GALT2O43825 422 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 THBS1P07996 1170 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 FGF9P31371 208 aaPredicted RBP16.61■□□□□ 0.25
RAB40C-203ENST00000535977 PTGER1P34995 402 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 SRP9P49458 86 aaKnown RBP16.61■□□□□ 0.25
RAB40C-203ENST00000535977 RPS7P62081 194 aaKnown RBP16.61■□□□□ 0.25
RAB40C-203ENST00000535977 DSG2Q14126 1118 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 TMEM196Q5HYL7 178 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 ENPP7Q6UWV6 458 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 USP53Q70EK8 1073 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 KRT74Q7RTS7 529 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 HMGN2P46Q86SG4 172 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 UXS1Q8NBZ7 420 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 ZG16BQ96DA0 208 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 SLC41A3Q96GZ6 507 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 FAM46AQ96IP4 442 aaKnown RBP16.61■□□□□ 0.25
RAB40C-203ENST00000535977 ARHGAP9Q9BRR9 750 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 TWSG1Q9GZX9 223 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 IGFLR1Q9H665 355 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 GPR55Q9Y2T6 319 aaPredicted RBP16.61■□□□□ 0.25
RAB40C-203ENST00000535977 SHISA3A0PJX4 238 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 CHST10O43529 356 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 SELENOFO60613 162 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 TCRBP04435 133 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 LAMP2P13473 410 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 ZP1P60852 638 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 TSPAN5P62079 268 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 LSM11P83369 360 aaKnown RBP eCLIP16.61■□□□□ 0.25
RAB40C-203ENST00000535977 RIPPLY1Q0D2K3 151 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 DUSP8Q13202 625 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 FBXO42Q6P3S6 717 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 PARM1Q6UWI2 310 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 FRRS1Q6ZNA5 592 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 ZFP41Q8N8Y5 198 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 CAMKVQ8NCB2 501 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 MOSPD2Q8NHP6 518 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 ZFPM2Q8WW38 1151 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 PMM1Q92871 262 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 WDR92Q96MX6 357 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 DPAGT1Q9H3H5 408 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 SYNDIG1Q9H7V2 258 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 ZNF624Q9P2J8 865 aaPredicted RBP16.61■□□□□ 0.25
RAB40C-203ENST00000535977 WDR45Q9Y484 360 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 CHST2Q9Y4C5 530 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 A0A1W2PS29 197 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 TNFRSF10CO14798 259 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 SIGLEC5O15389 551 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 KLF4O43474 513 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 APOC1P02654 83 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 TRHRP34981 398 aaPredicted RBP16.61■□□□□ 0.25
RAB40C-203ENST00000535977 SELENOPP49908 381 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 PDX1P52945 283 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 CDH11P55287 796 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 ACSM1Q08AH1 577 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 SIGLEC14Q08ET2 396 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 MZT2AQ6P582 158 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 B3GLCTQ6Y288 498 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 GDF7Q7Z4P5 450 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 OR7G2Q8NG99 324 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 GATAD2BQ8WXI9 593 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 METTL17Q9H7H0 456 aaPredicted RBP16.61■□□□□ 0.25
RAB40C-203ENST00000535977 CNIH4Q9P003 139 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 CHD7Q9P2D1 2997 aa16.61■□□□□ 0.25
RAB40C-203ENST00000535977 SURF4O15260 269 aa16.6■□□□□ 0.25
RAB40C-203ENST00000535977 SSNA1O43805 119 aa16.6■□□□□ 0.25
RAB40C-203ENST00000535977 IFI6P09912 130 aa16.6■□□□□ 0.25
RAB40C-203ENST00000535977 MEOX2P50222 304 aa16.6■□□□□ 0.25
RAB40C-203ENST00000535977 AADACL4Q5VUY2 407 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms